.gitignore

### Documentation ###
/docs_*/build/

### Virtualenv ###
.venv/

### OSX ###
.DS_Store
.AppleDouble
.LSOverride

### SublimeText ###
# cache files for sublime text
*.tmlanguage.cache
*.tmPreferences.cache
*.stTheme.cache

# workspace files are user-specific
*.sublime-workspace

# project files should be checked into the repository, unless a significant
# proportion of contributors will probably not be using SublimeText
# *.sublime-project

# sftp configuration file
sftp-config.json

# Basics
*.py[cod]
__pycache__

# Logs
logs
*.log
pip-log.txt
npm-debug.log*
selenium-debug.log

# Unit test / coverage reports
.coverage
.tox
nosetests.xml
htmlcov
coverage.xml
coverage.lcov

# Translations
*.mo
*.pot

# Pycharm
.idea/*
docs/pycharm/*

# Provided default Pycharm Run/Debug Configurations should be tracked by git
# In case of local modifications made by Pycharm, use update-index command
# for each changed file, like this:
# git update-index --assume-unchanged .idea/omics_data_access.iml
# !.idea/runConfigurations/
# !.idea/omics_data_access.iml
# !.idea/vcs.xml
# !.idea/webResources.xml

# Vim
*~
*.swp
*.swo

# Node.js and Webpack
node_modules/
dist/
tests/node/unit/coverage/
tests/node/e2e/reports/
*.ntvs*
*.njsproj
webpack-stats.json

# Compass
.sass-cache

# virtual environments
.env

# User-uploaded media
sodar/media/

# Static files
staticfiles/

# File handles
.nfs*

# Flamegraph
flamegraph.pl

# Certificate files
*.crt
*.pem

# Celery
celerybeat-schedule
celerybeat-schedule.db
celerybeat.pid

# iRODS files
irods_config.zip
irods_environment.json

# Vscode
.vscode/*

# Static dir for local includes in production mode
static-local

# Icons
*/static/iconify/*.json
*/static/iconify/json/*.json

# Site template include directory
# TODO: Remove ignore once files are moved outside of the repo in docker env
sodar/templates/include/*

# Samplesheets configuration file directory
# TODO: Remove ignore once files are moved outside of the repo in docker env
samplesheets/config/*