AttributeError: module 'pylab' has no attribute 'register_cmap' - when I try to use metaphlan_hclust_heatmap.py #3
Description
Hello!
I am trying to make a heatmap from metaphlan output table and I got next error
"""
Traceback (most recent call last):
File "/scripts_metaphlan/./metaphlan_hclust_heatmap.py", line 461, in
hclust( fin = pars['in'],
~~~~~~^^^^^^^^^^^^^^^^^^^^^^
fout = pars['out'],
^^^^^^^^^^^^^^^^^^^
...<18 lines>...
tax_lev = pars['tax_lev']
^^^^^^^^^^^^^^^^^^^^^^^^^
)
^
File "/scripts_metaphlan/./metaphlan_hclust_heatmap.py", line 390, in hclust
add_cmap( c, n )
~~~~~~~~^^^^^^^^
File "/scripts_metaphlan/./metaphlan_hclust_heatmap.py", line 222, in add_cmap
pylab.register_cmap(name=name,cmap=my_cmap)
^^^^^^^^^^^^^^^^^^^
AttributeError: module 'pylab' has no attribute 'register_cmap'
"""
In the https://matplotlib.org/stable/api/pylab.html - pylab is a historic interface and its use is strongly discouraged.
I would appreciate any help,
How can I solve this issue?
Best,
Alla