diff --git a/bervo.json b/bervo.json index 45ea10d..14b1954 100644 --- a/bervo.json +++ b/bervo.json @@ -13,15 +13,11 @@ "val" : "BERVO" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2025-07-28" + "val" : "2025-08-01" } ], - "version" : "http://purl.obolibrary.org/obo/bervo/releases/2025-07-28/bervo.json" + "version" : "http://purl.obolibrary.org/obo/bervo/releases/2025-08-01/bervo.json" }, "nodes" : [ { - "id" : "http://purl.obolibrary.org/obo/BERVO_0000000", - "lbl" : "root node", - "type" : "CLASS" - }, { "id" : "https://w3id.org/bervo/BERVO_0000000", "lbl" : "variable", "type" : "CLASS", @@ -3088,6 +3084,9 @@ "lbl" : "leaf water content, (g H2O g-1 C)", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Water associated with leaf biomass" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3099,6 +3098,9 @@ "lbl" : "leaf water content in bundle sheath, in C4 CO2 fixn", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Leaf biomass water in bundle sheath cells" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3114,6 +3116,9 @@ "lbl" : "leaf water content in mesophyll in C4 CO2 fixn", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Leaf biomass water in mesophyll cells" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3129,6 +3134,9 @@ "lbl" : "min N:C,P:C in leaves relative to max values from PFT file", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of leaf. The NC or PC ratios are computed based on leaf stoichiometry. " + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3140,6 +3148,9 @@ "lbl" : "min N:C,P:C in grain relative to max values from PFT file", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of grains. The NC or PC ratios are computed based on leaf stoichiometry. " + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3151,6 +3162,9 @@ "lbl" : "fraction of stalk area contributing to water,heat flow", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Fraction of stalk area that holds the xylem and phloem tubes for water and metabolite transport between plant organs" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3162,6 +3176,9 @@ "lbl" : "maximum stalk inner radius for tranpsiration", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maxium allowed tube radius to do xylem and phloem transport, located at the out surface of stalk." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3177,6 +3194,9 @@ "lbl" : "stalk density", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Carbn-based stalk mass denisty used to copmute stalk volume" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3192,6 +3212,9 @@ "lbl" : "specific volume (m3 gC-1)", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Stalk volume per g carbon biomass" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3203,6 +3226,9 @@ "lbl" : "Fraction used to calculate woody faction of stalk,root", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "It is a model-specific scaling parameter for computing biomass allocation to canopy foliage" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3214,6 +3240,9 @@ "lbl" : "Km for nonstructural C concn on seed set", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Half saturation parameter for modeling carbon biomass flow during seed setting using the Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3229,6 +3258,9 @@ "lbl" : "Km for nonstructural N concn on seed set", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Half saturation parameter for modeling nitrogen biomass flow during seed setting using the Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3244,6 +3276,9 @@ "lbl" : "Km for nonstructural P concn on seed set", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Half saturation parameter for modeling phosphorus biomass flow during seed setting using the Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3259,6 +3294,9 @@ "lbl" : "parameter for calculating leaf area expansion", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "An exponent parameter to compute leaf area expansion in the model" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3270,6 +3308,9 @@ "lbl" : "parameter for calculating petiole extension", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "An exponent parameter to compute petiole length expansion in the model" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3281,6 +3322,9 @@ "lbl" : "parameter for calculating stalk extension", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "an exponent parameter to compuate stalk volume expasion in the model" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3292,6 +3336,9 @@ "lbl" : "maximum C:N ratio for nonstructural N transfer", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "A stoichiometry ratio to compute the minimum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3303,6 +3350,9 @@ "lbl" : "maximum C:P ratio for nonstructural P transfer", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "A stoichiometry ratio to compute the minimum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3314,6 +3364,9 @@ "lbl" : "minimum C:N ratio for nonstructural N transfer", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "A stoichiometry ratio to compute the maximum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3325,6 +3378,9 @@ "lbl" : "minimum C:P ratio for nonstructural P transfer", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "A stoichiometry ratio to compute the maximum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3336,6 +3392,9 @@ "lbl" : "N fixation yield from C oxidation", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "It quantifies how much nitrogen can be fixed from N2 in the form NH3 when one mass unit of carbon is oxidized " + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3351,6 +3410,9 @@ "lbl" : "specific respiration rate by bacterial N2 fixers", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "It quantifies how fast nitrogen fixing bacteria can oxidize its nonstructural biomass carbon to support its metabolism." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3366,6 +3428,9 @@ "lbl" : "half saturation parameter for nodule maintenance respiration", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "The half saturation parameter when the effect of nodule C biomass on its maintenance is modeled using Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3381,6 +3446,9 @@ "lbl" : "specific decomposition rate by bacterial N2 fixers", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "It quantifies how fast the N-fixing bacteria lose activity when mortality is modeled using the linear kinetics." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3396,6 +3464,9 @@ "lbl" : "parameter to calculate nonstructural C,N,P exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "A model-specifc parameter to compute carbon, nitrogen and phosphorus exchange between nodule bacteria and their hosting plants." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3407,6 +3478,9 @@ "lbl" : "initial bacterial mass at infection", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Initial noduble carbon biomass C at the time of infection of the hosting plant. The infection is applied when noduble biomass of the hosting plant is zero." + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3422,6 +3496,9 @@ "lbl" : "Km for nonstructural Nuptake by bacteria", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Half saturation parameter for modeling bacterial use of nonstructural nitrogen using the Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3437,6 +3514,9 @@ "lbl" : "Km for nonstructural P uptake by bacteria", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Half saturation parameter for modeling bacterial use of nonstructural phosphorus using the Michaelis-Menten kinetics" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3452,6 +3532,9 @@ "lbl" : "minimum fractions for root C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Minimum fraction of root C can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3463,6 +3546,9 @@ "lbl" : "maximum fractions for root C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of root C can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3474,6 +3560,9 @@ "lbl" : "maximum fractions for root N recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of root nitrogen can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3485,6 +3574,9 @@ "lbl" : "maximum fractions for root P recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of root phosphorus can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3496,6 +3588,9 @@ "lbl" : "minimum fractions for bacteria C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Minimum fraction of nodule bacteria C can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3507,6 +3602,9 @@ "lbl" : "maximum fractions for bacteria C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of nodule bacteria C can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3518,6 +3616,9 @@ "lbl" : "maximum fractions for bacteria N recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of nodule bacteria nitrogen can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3529,6 +3630,9 @@ "lbl" : "maximum fractions for bacteria P recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Maximum fraction of nodule bacteria phosphorus can be recyled during root death" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3540,6 +3644,9 @@ "lbl" : "required hours after physl maturity until start of LitrFall", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Number of hours need to accumulate to trigger litterfall after leaf maturity " + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3555,6 +3662,9 @@ "lbl" : "rate constant for remobiln of storage chemical element during leafout", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate parameter to compute the gradient driven carbon and nutrient exchange between seasonal storage and nonstructural pools" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3570,6 +3680,9 @@ "lbl" : "rate constant for leaf-reserve nonstructural C exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate parameter to compute the gradient driven carbon exchange between stalk and leaf reserve pools" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3585,6 +3698,9 @@ "lbl" : "rate constant for leaf-reserve nonstructural N,P exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate parameter to compute the gradient driven nitrogen and phosphorus exchange between stalk and leaf reserve pools" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3600,6 +3716,9 @@ "lbl" : "rate constant for leaf-storage nonstructural chemical element exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate parameter for gradient-driven nonstructural carbon and nutrient exchange between shoot and seasonal storage pools" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3615,6 +3734,9 @@ "lbl" : "rate constant for root-storage nonstructural chemical element exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate parameter for gradient driven nonstructural carbon and nutrient exchange between root and seasonal storage pools" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3630,6 +3752,9 @@ "lbl" : "root partitioning of storage C during leafout", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Fraction of mobilized seasonal storage allocated to roots upon leaf out" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3641,6 +3766,9 @@ "lbl" : "shoot partitioning of storage C during leafout", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Fraction of mobilized seasonal storage allocated to shoots upon leaf out" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3652,6 +3780,9 @@ "lbl" : "rate constant for plant-bacteria nonstructl C,N,P exchange", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "Rate constant for modeling nonstructural C,N and P exchange between hosting plants and nodule bacteria" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3667,6 +3798,9 @@ "lbl" : "maximum fractions for shoot N recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the maximum fraction of nitrogen can be recycled upon senescence of plant canopy organs" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3678,6 +3812,9 @@ "lbl" : "maximum fractions for shoot P recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the maximum fraction of phosphorus can be recycled upon senescence of plant canopy organs" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3689,6 +3826,9 @@ "lbl" : "minimum fractions for shoot C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the minimum fraction of carbon can be recycled upon senescence of plant canopy organs" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3700,6 +3840,9 @@ "lbl" : "maximum fractions for shoot C recycling", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the maximum fraction of carbon can be recycled upon senescence of plant canopy organs" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3711,6 +3854,9 @@ "lbl" : "number of hours after physiol maturity required for senescence", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the number of hours required for plant to initiate senescence after maturity" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3726,6 +3872,9 @@ "lbl" : "number of hours required to initiate remobilization of storage C for leafout", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies the number of hours required for plant to initiate storage carbon remobilization after leafout" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3741,6 +3890,9 @@ "lbl" : "specific oxidation rate of nonstructural C during leafout at 25 C", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameters specifies how much seasonal storage C is oxidized to support canopy and root development" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3756,6 +3908,9 @@ "lbl" : "relative primary root sink strength 0.25=shallow,4.0=deep root profile", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameter scales the relative sink strength for non-structural carbon and nutrient for growing primary and secondary roots" + }, "comments" : [ "GrosubPars.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3767,6 +3922,9 @@ "lbl" : "changes to weather data (0=none,1=step,2=transient)", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameter is obsolete, and was EcoSIM specific." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3778,6 +3936,9 @@ "lbl" : "flag for land management", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This parameter is obsolete, and was EcoSIM specific." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3789,6 +3950,9 @@ "lbl" : "weather data type:1=daily,2=hourly for first(L=1) or second(L=2) scene", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This EcoSIM specific flag parameter is used for internal forcing data processing" + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3800,6 +3964,9 @@ "lbl" : "fertilizer release type from fertilizer input file", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This specifies what kind of fertilizer is applied in the model, which could be mineral fertilizer, plant residue, or animal maure." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3811,6 +3978,9 @@ "lbl" : "soil disturbance type", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This EcoSIM flag parameters specifies what type of disturbances are applied to soil, including tillage, fire, litter removal or drainge." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3822,6 +3992,9 @@ "lbl" : "Koppen climate zone", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "The Köppen climate zone refers to a region defined by the Köppen climate classification system. " + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3833,6 +4006,9 @@ "lbl" : "flag for irrigation criterion,0=SWC,1=canopy water potential", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This EcoSIM parameter species how irrigation is triggered, which could be based on soil moisture content or canopy water potential" + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3844,6 +4020,9 @@ "lbl" : "disturbance flag", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This EcoSIM parameter species whether to reset soil profile after some triggering events, like erosion or tillage." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3855,6 +4034,9 @@ "lbl" : "banded NH4 fertilizer flag", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This flag indicates wheter NH4 is applied with broadcast." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3866,6 +4048,9 @@ "lbl" : "banded NO3 fertilizer flag", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This flag indicates wheter NO3 is applied with broadcast." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3877,6 +4062,9 @@ "lbl" : "banded H2PO4 fertilizer flag", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This flag indicates whether H2PO4 is applied with broadcast" + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3888,6 +4076,9 @@ "lbl" : "flag for calculating FC(1),WP(2),SCNV(3),SCNH(4)", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This indicates whether the model has input soil properties or has to compute based on soil texture and soil organic matter." + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -3899,6 +4090,9 @@ "lbl" : "natural(0),reconstructed(1) soil profile", "type" : "CLASS", "meta" : { + "definition" : { + "val" : "This indicates the soil input type, whether is natural or reconstruction " + }, "comments" : [ "FlagDataType.txt" ], "synonyms" : [ { "pred" : "hasRelatedSynonym", @@ -29968,7 +30162,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001778", - "lbl" : "sclar for northern subsurface boundary water flux", + "lbl" : "scalar for northern subsurface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -29979,7 +30173,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001779", - "lbl" : "sclar for eastern subsurface boundary water flux", + "lbl" : "scalar for eastern subsurface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -29990,7 +30184,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001780", - "lbl" : "sclar for southern subsurface boundary water flux", + "lbl" : "scalar for southern subsurface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30001,7 +30195,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001781", - "lbl" : "sclar for western subsurface boundary water flux", + "lbl" : "scalar for western subsurface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30072,7 +30266,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001786", - "lbl" : "sclar for northern surface boundary water flux", + "lbl" : "scalar for northern surface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30083,7 +30277,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001787", - "lbl" : "sclar for eastern surface boundary water flux", + "lbl" : "scalar for eastern surface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30094,7 +30288,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001788", - "lbl" : "sclar for southern surface boundary water flux", + "lbl" : "scalar for southern surface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30105,7 +30299,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001789", - "lbl" : "sclar for western surface boundary water flux", + "lbl" : "scalar for western surface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30116,7 +30310,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_0001790", - "lbl" : "sclar for lower subsurface boundary water flux", + "lbl" : "scalar for lower subsurface boundary water flux", "type" : "CLASS", "meta" : { "comments" : [ "SoilWaterDataType.txt" ], @@ -30753,7 +30947,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000000", - "lbl" : "ecosim biogeochemical flux type", + "lbl" : "biogeochemical flux type", "type" : "CLASS", "meta" : { "comments" : [ "EcosimBGCFluxType.txt" ], @@ -30808,7 +31002,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000005", - "lbl" : "ecosim sum data type", + "lbl" : "sum data type", "type" : "CLASS", "meta" : { "comments" : [ "EcoSimSumDataType.txt" ], @@ -30852,7 +31046,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000009", - "lbl" : "land surf data type", + "lbl" : "land surface data type", "type" : "CLASS", "meta" : { "comments" : [ "LandSurfDataType.txt" ], @@ -30940,7 +31134,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000017", - "lbl" : "surf litter data type", + "lbl" : "surface litter data type", "type" : "CLASS", "meta" : { "comments" : [ "SurfLitterDataType.txt" ], @@ -30973,7 +31167,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000020", - "lbl" : "ecosim constant", + "lbl" : "constant", "type" : "CLASS", "meta" : { "comments" : [ "EcoSimConst.txt" ], @@ -30995,7 +31189,7 @@ } }, { "id" : "https://w3id.org/bervo/BERVO_9000022", - "lbl" : "surf and soil data type", + "lbl" : "surface and soil data type", "type" : "CLASS", "meta" : { "comments" : [ "SurfSoilDataType.txt" ], diff --git a/bervo.obo b/bervo.obo index da35de7..dade517 100644 --- a/bervo.obo +++ b/bervo.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: releases/2025-07-28 +data-version: releases/2025-08-01 idspace: bervo https://w3id.org/bervo/ idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ @@ -8,11 +8,7 @@ ontology: bervo property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "BERVO" xsd:string -property_value: owl:versionInfo "2025-07-28" xsd:string - -[Term] -id: BERVO:0000000 -name: root node +property_value: owl:versionInfo "2025-08-01" xsd:string [Term] id: bervo:BERVO_0000000 @@ -25,7 +21,7 @@ name: ecosystem net radiation def: "Total incoming shorwave radiation and sky longwave radiation minus the reflected short wave radiation and outgoing longwave radiation from the land surface and vegetation" [] comment: EcosimBGCFluxType.txt synonym: "Eco_NetRad_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20h-1 [Term] @@ -34,7 +30,7 @@ name: ecosystem latent heat flux def: "Heat associated the ecosystem evapotranspiration." [] comment: EcosimBGCFluxType.txt synonym: "Eco_Heat_Latent_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20h-1 [Term] @@ -43,7 +39,7 @@ name: ecosystem sensible heat flux def: "Sensible heat flux between the atmosphere and land surface enties made up by groud surface and vegetation" [] comment: EcosimBGCFluxType.txt synonym: "Eco_Heat_Sens_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20h-1 [Term] @@ -52,7 +48,7 @@ name: ecosystem storage heat flux def: "The residual heat flux into ground computed by subtracting the ecosystem latent heat flux and sensible heat flux from the net ecossytem radiation. This heat flux drives the temperature change of soil." [] comment: EcosimBGCFluxType.txt synonym: "Eco_Heat_GrndSurf_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20h-1 [Term] @@ -61,7 +57,7 @@ name: cumulative ecosystem GPP def: "Cumulative gross primary productiivty from the begging of the year to the current day of year." [] comment: EcosimBGCFluxType.txt synonym: "Eco_GPP_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -70,7 +66,7 @@ name: cumulative ecosystem autotrophic respiration def: "Cumulative plant autotrophic respiration, including contirbutions from maintenance and growth." [] comment: EcosimBGCFluxType.txt synonym: "Eco_AutoR_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 [Term] @@ -79,7 +75,7 @@ name: cumulative ecosystem NPP def: "Cumulative net primary productiivyt computed by subtracting from autotrophic respiration from gross primary productivity." [] comment: EcosimBGCFluxType.txt synonym: "Eco_NPP_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 [Term] @@ -88,7 +84,7 @@ name: cumulative ecosystem heterotrophic respiration def: "Cumulative hetetrophic respiration due to microbial and abiotic decomposition of soil organic matter, counted based on both CO2 and CH4" [] comment: EcosimBGCFluxType.txt synonym: "Eco_HR_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 [Term] @@ -97,7 +93,7 @@ name: heterotrophic respiration as CO2 def: "Ecosystem hetetrophic respiration counted based CO2" [] comment: EcosimBGCFluxType.txt synonym: "ECO_HR_CO2_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2%20hr-1 [Term] @@ -106,7 +102,7 @@ name: vertically resolved heterotrophic respiraiton as CO2 def: "Ecosystem hetetrophic respiration counted based CO2 for different depths in the soil" [] comment: EcosimBGCFluxType.txt synonym: "ECO_HR_CO2_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC/d2/hr [Term] @@ -115,7 +111,7 @@ name: heterotrophic respiration as CH4 def: "Ecosystem hetetrophic respiration counted based CH4 for different depths in the soil" [] comment: EcosimBGCFluxType.txt synonym: "ECO_HR_CH4_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 [Term] @@ -124,7 +120,7 @@ name: ecosystem harvest def: "Ecosystem harvest refers to the removal of biological products (like timber, fodder, firewood, biofuels, and non-timber forest products) from an ecosystem. It is a form of ecosystem service and is critical to many human livelihoods and economies worldwide. In the context of an earth system model, ecosystem harvest is important to consider as it can significantly impact biodiversity, vegetation structure, and biogeochemical cycles." [] comment: EcosimBGCFluxType.txt synonym: "EcoHavstElmnt_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Harvest property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 @@ -134,7 +130,7 @@ name: total NH4 net mineraln (-ve) or immobiln (+ve) def: "Cumulative nitrogen release in the form of NH4 during microibal decomposition of soil organic matter, net mineralization is defined as the difference between gross NH4 release from organic matter and uptake for microbial biomass synthesis " [] comment: EcosimBGCFluxType.txt synonym: "NetNH4Mineralize_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN%20d-2 [Term] @@ -143,7 +139,7 @@ name: total H2PO4 net mineraln (-ve) or immobiln (+ve) def: "Cumulative mineral phosphorus release in the form of PO43 during microbial decomposition of soil organic matter, net mineralization is defined as the difference between gross release from organic matter and microbial uptake for biomass synthesis " [] comment: EcosimBGCFluxType.txt synonym: "NetPO4Mineralize_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gP%20d-2 [Term] @@ -152,7 +148,7 @@ name: total net CO2 fixation def: "WIthin canopy net carbon excahnge defined as the difference between carbon fixation by photosynthesis and CO2 reelase due to autotrophic respiration and disturbances, such as fire, grazing and harvest." [] comment: EcosimBGCFluxType.txt synonym: "Canopy_NEE_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2%20h-1 [Term] @@ -161,7 +157,7 @@ name: total LitrFall chemical elements def: "This refers to the chemical elements (C, N, P) that are taken away from the plants through litterfall." [] comment: EcosimBGCFluxType.txt synonym: "LitrFallStrutElms_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2%20h-1 [Term] @@ -170,7 +166,7 @@ name: ecosystem respiration def: "Ecosystem respiration refers to the release of CO2 and CH4 due to both below and above ground microbial metabolism and plant autotrophic respiration. In EcoSIM, the belowground flux is computed as the land surface release of CO2 through diffusion, ebullition, plant-aided transport, and wet depostion through precipitation and irrigation " [] comment: EcosimBGCFluxType.txt synonym: "ECO_ER_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2%20h-1 [Term] @@ -179,7 +175,7 @@ name: cumulative NBP def: "cumualtive Net biome production refers to the accumulated net carbon fixation by the ecossystem computed as the difference between carbon fixation through photosynthesis and carbon loss through plant and microibal respiration and any kind of disturbances" [] comment: EcosimBGCFluxType.txt synonym: "Eco_NBP_CumYr_col" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20d-2 [Term] @@ -188,7 +184,7 @@ name: Current HPO4 demand in non-band by all microbial,root,myco populations def: "This refers to the vertically resolved inorganic P demand to support plant roots and microbial uptake from non-banded soil" [] comment: EcosimBGCFluxType.txt synonym: "REcoH1PO4DmndSoil_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN%20d-2%20h-1 [Term] @@ -197,7 +193,7 @@ name: previous time step HPO4 demand in non-band by all microbial,root,myco popu def: "This refers to the previous time step vertically resolved inorganic P demand to support plant roots and microbial uptake from non-banded soil" [] comment: EcosimBGCFluxType.txt synonym: "RH1PO4EcoDmndSoilPrev_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN%20d-2%20h-1 [Term] @@ -206,7 +202,7 @@ name: Current HPO4 demand in band by all microbial,root,myco populations def: "This refers to the vertically resolved inorganic P demand to support plant roots and microbial uptake from soil bands. Soil bands are defined according to fertilizer application in the form of sidedressing" [] comment: EcosimBGCFluxType.txt synonym: "REcoH1PO4DmndBand_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN%20d-2%20h-1 [Term] @@ -215,7 +211,7 @@ name: Previous time step HPO4 demand in band by all microbial,root,myco populati def: "This refers to the previous time step vertically resolved inorganic P demand to support plant roots and microbial uptake from soil bands. Soil bands are defined according to fertilizer application in the form of sidedressing" [] comment: EcosimBGCFluxType.txt synonym: "RH1PO4EcoDmndBandPrev_vr" RELATED [] -is_a: bervo:BERVO_9000000 ! ecosim biogeochemical flux type +is_a: bervo:BERVO_9000000 ! biogeochemical flux type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN%20d-2%20h-1 [Term] @@ -1569,6 +1565,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/uM [Term] id: bervo:BERVO_0000176 name: leaf water content, (g H2O g-1 C) +def: "Water associated with leaf biomass" [] comment: GrosubPars.txt synonym: "FDML" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1576,6 +1573,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000177 name: leaf water content in bundle sheath, in C4 CO2 fixn +def: "Leaf biomass water in bundle sheath cells" [] comment: GrosubPars.txt synonym: "FBS" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1584,6 +1582,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H2O%20(gC)-1 [Term] id: bervo:BERVO_0000178 name: leaf water content in mesophyll in C4 CO2 fixn +def: "Leaf biomass water in mesophyll cells" [] comment: GrosubPars.txt synonym: "FMP" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1592,6 +1591,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H2O%20(gC)-1 [Term] id: bervo:BERVO_0000179 name: min N:C,P:C in leaves relative to max values from PFT file +def: "Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of leaf. The NC or PC ratios are computed based on leaf stoichiometry. " [] comment: GrosubPars.txt synonym: "ZPLFM" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1599,6 +1599,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000180 name: min N:C,P:C in grain relative to max values from PFT file +def: "Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of grains. The NC or PC ratios are computed based on leaf stoichiometry. " [] comment: GrosubPars.txt synonym: "ZPGRM" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1606,6 +1607,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000181 name: fraction of stalk area contributing to water,heat flow +def: "Fraction of stalk area that holds the xylem and phloem tubes for water and metabolite transport between plant organs" [] comment: GrosubPars.txt synonym: "FSTK" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1613,6 +1615,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000182 name: maximum stalk inner radius for tranpsiration +def: "Maxium allowed tube radius to do xylem and phloem transport, located at the out surface of stalk." [] comment: GrosubPars.txt synonym: "ZSTX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1621,6 +1624,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] id: bervo:BERVO_0000183 name: stalk density +def: "Carbn-based stalk mass denisty used to copmute stalk volume" [] comment: GrosubPars.txt synonym: "StalkMassDensity" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1629,6 +1633,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MgC%20m-3 [Term] id: bervo:BERVO_0000184 name: specific volume (m3 gC-1) +def: "Stalk volume per g carbon biomass" [] comment: GrosubPars.txt synonym: "SpecStalkVolume" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1636,6 +1641,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000185 name: Fraction used to calculate woody faction of stalk,root +def: "It is a model-specific scaling parameter for computing biomass allocation to canopy foliage" [] comment: GrosubPars.txt synonym: "FRTX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1643,6 +1649,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000186 name: Km for nonstructural C concn on seed set +def: "Half saturation parameter for modeling carbon biomass flow during seed setting using the Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "SETC" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1651,6 +1658,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20g-1 [Term] id: bervo:BERVO_0000187 name: Km for nonstructural N concn on seed set +def: "Half saturation parameter for modeling nitrogen biomass flow during seed setting using the Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "SETN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1659,6 +1667,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20g-1 [Term] id: bervo:BERVO_0000188 name: Km for nonstructural P concn on seed set +def: "Half saturation parameter for modeling phosphorus biomass flow during seed setting using the Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "SETP" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1667,6 +1676,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20g-1 [Term] id: bervo:BERVO_0000189 name: parameter for calculating leaf area expansion +def: "An exponent parameter to compute leaf area expansion in the model" [] comment: GrosubPars.txt synonym: "SLA2" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1674,6 +1684,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000190 name: parameter for calculating petiole extension +def: "An exponent parameter to compute petiole length expansion in the model" [] comment: GrosubPars.txt synonym: "SSL2" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1681,6 +1692,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000191 name: parameter for calculating stalk extension +def: "an exponent parameter to compuate stalk volume expasion in the model" [] comment: GrosubPars.txt synonym: "SNL2" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1688,6 +1700,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000192 name: maximum C:N ratio for nonstructural N transfer +def: "A stoichiometry ratio to compute the minimum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." [] comment: GrosubPars.txt synonym: "CNMX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1695,6 +1708,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000193 name: maximum C:P ratio for nonstructural P transfer +def: "A stoichiometry ratio to compute the minimum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." [] comment: GrosubPars.txt synonym: "CPMX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1702,6 +1716,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000194 name: minimum C:N ratio for nonstructural N transfer +def: "A stoichiometry ratio to compute the maximum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." [] comment: GrosubPars.txt synonym: "CNMN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1709,6 +1724,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000195 name: minimum C:P ratio for nonstructural P transfer +def: "A stoichiometry ratio to compute the maximum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants." [] comment: GrosubPars.txt synonym: "CPMN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1716,6 +1732,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000196 name: N fixation yield from C oxidation +def: "It quantifies how much nitrogen can be fixed from N2 in the form NH3 when one mass unit of carbon is oxidized " [] comment: GrosubPars.txt synonym: "EN2F" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1724,6 +1741,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20N%20g-1%20C [Term] id: bervo:BERVO_0000197 name: specific respiration rate by bacterial N2 fixers +def: "It quantifies how fast nitrogen fixing bacteria can oxidize its nonstructural biomass carbon to support its metabolism." [] comment: GrosubPars.txt synonym: "VMXO" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1732,6 +1750,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20g-1%20h-1 [Term] id: bervo:BERVO_0000198 name: half saturation parameter for nodule maintenance respiration +def: "The half saturation parameter when the effect of nodule C biomass on its maintenance is modeled using Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "SPNDLK" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1740,6 +1759,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC [Term] id: bervo:BERVO_0000199 name: specific decomposition rate by bacterial N2 fixers +def: "It quantifies how fast the N-fixing bacteria lose activity when mortality is modeled using the linear kinetics." [] comment: GrosubPars.txt synonym: "SPNDL" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1748,6 +1768,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000200 name: parameter to calculate nonstructural C,N,P exchange +def: "A model-specifc parameter to compute carbon, nitrogen and phosphorus exchange between nodule bacteria and their hosting plants." [] comment: GrosubPars.txt synonym: "CCNGR" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1755,6 +1776,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000202 name: initial bacterial mass at infection +def: "Initial noduble carbon biomass C at the time of infection of the hosting plant. The infection is applied when noduble biomass of the hosting plant is zero." [] comment: GrosubPars.txt synonym: "NodulBiomCAtInfection" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1763,6 +1785,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC [Term] id: bervo:BERVO_0000203 name: Km for nonstructural Nuptake by bacteria +def: "Half saturation parameter for modeling bacterial use of nonstructural nitrogen using the Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "CZKM" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1771,6 +1794,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gN [Term] id: bervo:BERVO_0000204 name: Km for nonstructural P uptake by bacteria +def: "Half saturation parameter for modeling bacterial use of nonstructural phosphorus using the Michaelis-Menten kinetics" [] comment: GrosubPars.txt synonym: "CPKM" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1779,6 +1803,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gP [Term] id: bervo:BERVO_0000205 name: minimum fractions for root C recycling +def: "Minimum fraction of root C can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCZR" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1786,6 +1811,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000206 name: maximum fractions for root C recycling +def: "Maximum fraction of root C can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCYR" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1793,6 +1819,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000207 name: maximum fractions for root N recycling +def: "Maximum fraction of root nitrogen can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCXR" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1800,6 +1827,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000208 name: maximum fractions for root P recycling +def: "Maximum fraction of root phosphorus can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCQR" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1807,6 +1835,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000209 name: minimum fractions for bacteria C recycling +def: "Minimum fraction of nodule bacteria C can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCZN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1814,6 +1843,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000210 name: maximum fractions for bacteria C recycling +def: "Maximum fraction of nodule bacteria C can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCYN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1821,6 +1851,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000211 name: maximum fractions for bacteria N recycling +def: "Maximum fraction of nodule bacteria nitrogen can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCXN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1828,6 +1859,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000212 name: maximum fractions for bacteria P recycling +def: "Maximum fraction of nodule bacteria phosphorus can be recyled during root death" [] comment: GrosubPars.txt synonym: "RCCQN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1835,6 +1867,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000213 name: required hours after physl maturity until start of LitrFall +def: "Number of hours need to accumulate to trigger litterfall after leaf maturity " [] comment: GrosubPars.txt synonym: "HoursReq4LiterfalAftMature" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1843,6 +1876,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h [Term] id: bervo:BERVO_0000214 name: rate constant for remobiln of storage chemical element during leafout +def: "Rate parameter to compute the gradient driven carbon and nutrient exchange between seasonal storage and nonstructural pools" [] comment: GrosubPars.txt synonym: "FRSV" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1851,6 +1885,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000215 name: rate constant for leaf-reserve nonstructural C exchange +def: "Rate parameter to compute the gradient driven carbon exchange between stalk and leaf reserve pools" [] comment: GrosubPars.txt synonym: "FXFY" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1859,6 +1894,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000216 name: rate constant for leaf-reserve nonstructural N,P exchange +def: "Rate parameter to compute the gradient driven nitrogen and phosphorus exchange between stalk and leaf reserve pools" [] comment: GrosubPars.txt synonym: "FXFZ" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1867,6 +1903,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000217 name: rate constant for leaf-storage nonstructural chemical element exchange +def: "Rate parameter for gradient-driven nonstructural carbon and nutrient exchange between shoot and seasonal storage pools" [] comment: GrosubPars.txt synonym: "RateK4ShootSeaStoreNonstEXfer" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1875,6 +1912,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000218 name: rate constant for root-storage nonstructural chemical element exchange +def: "Rate parameter for gradient driven nonstructural carbon and nutrient exchange between root and seasonal storage pools" [] comment: GrosubPars.txt synonym: "RateK4RootSeaStorNonstEXfer" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1883,6 +1921,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000219 name: root partitioning of storage C during leafout +def: "Fraction of mobilized seasonal storage allocated to roots upon leaf out" [] comment: GrosubPars.txt synonym: "FXRT" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1890,6 +1929,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000220 name: shoot partitioning of storage C during leafout +def: "Fraction of mobilized seasonal storage allocated to shoots upon leaf out" [] comment: GrosubPars.txt synonym: "FXSH" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1897,6 +1937,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000221 name: rate constant for plant-bacteria nonstructl C,N,P exchange +def: "Rate constant for modeling nonstructural C,N and P exchange between hosting plants and nodule bacteria" [] comment: GrosubPars.txt synonym: "FXRN" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1905,6 +1946,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0000222 name: maximum fractions for shoot N recycling +def: "This parameters specifies the maximum fraction of nitrogen can be recycled upon senescence of plant canopy organs" [] comment: GrosubPars.txt synonym: "RCCX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1912,6 +1954,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000223 name: maximum fractions for shoot P recycling +def: "This parameters specifies the maximum fraction of phosphorus can be recycled upon senescence of plant canopy organs" [] comment: GrosubPars.txt synonym: "RCCQ" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1919,6 +1962,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000224 name: minimum fractions for shoot C recycling +def: "This parameters specifies the minimum fraction of carbon can be recycled upon senescence of plant canopy organs" [] comment: GrosubPars.txt synonym: "RCCZ" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1926,6 +1970,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000225 name: maximum fractions for shoot C recycling +def: "This parameters specifies the maximum fraction of carbon can be recycled upon senescence of plant canopy organs" [] comment: GrosubPars.txt synonym: "RCCY" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1933,6 +1978,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000226 name: number of hours after physiol maturity required for senescence +def: "This parameters specifies the number of hours required for plant to initiate senescence after maturity" [] comment: GrosubPars.txt synonym: "Hours4SenesAftMature" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1941,6 +1987,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h [Term] id: bervo:BERVO_0000227 name: number of hours required to initiate remobilization of storage C for leafout +def: "This parameters specifies the number of hours required for plant to initiate storage carbon remobilization after leafout" [] comment: GrosubPars.txt synonym: "HourReq2InitSStor4LeafOut" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1949,6 +1996,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h [Term] id: bervo:BERVO_0000228 name: specific oxidation rate of nonstructural C during leafout at 25 C +def: "This parameters specifies how much seasonal storage C is oxidized to support canopy and root development" [] comment: GrosubPars.txt synonym: "GVMX" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1957,6 +2005,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h [Term] id: bervo:BERVO_0000229 name: relative primary root sink strength 0.25=shallow,4.0=deep root profile +def: "This parameter scales the relative sink strength for non-structural carbon and nutrient for growing primary and secondary roots" [] comment: GrosubPars.txt synonym: "RTSK" RELATED [] is_a: bervo:BERVO_9000002 ! plant growth parameters @@ -1964,6 +2013,7 @@ is_a: bervo:BERVO_9000002 ! plant growth parameters [Term] id: bervo:BERVO_0000230 name: changes to weather data (0=none,1=step,2=transient) +def: "This parameter is obsolete, and was EcoSIM specific." [] comment: FlagDataType.txt synonym: "ICLM" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -1971,6 +2021,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000231 name: flag for land management +def: "This parameter is obsolete, and was EcoSIM specific." [] comment: FlagDataType.txt synonym: "IMNG" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -1978,6 +2029,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000232 name: weather data type:1=daily,2=hourly for first(L=1) or second(L=2) scene +def: "This EcoSIM specific flag parameter is used for internal forcing data processing" [] comment: FlagDataType.txt synonym: "IWTHR" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -1985,6 +2037,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000233 name: fertilizer release type from fertilizer input file +def: "This specifies what kind of fertilizer is applied in the model, which could be mineral fertilizer, plant residue, or animal maure." [] comment: FlagDataType.txt synonym: "IYTYP" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -1992,6 +2045,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000234 name: soil disturbance type +def: "This EcoSIM flag parameters specifies what type of disturbances are applied to soil, including tillage, fire, litter removal or drainge." [] comment: FlagDataType.txt synonym: "iSoilDisturbType_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -1999,6 +2053,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000235 name: Koppen climate zone +def: "The Köppen climate zone refers to a region defined by the Köppen climate classification system. " [] comment: FlagDataType.txt synonym: "KoppenClimZone_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2006,6 +2061,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000236 name: flag for irrigation criterion,0=SWC,1=canopy water potential +def: "This EcoSIM parameter species how irrigation is triggered, which could be based on soil moisture content or canopy water potential" [] comment: FlagDataType.txt synonym: "IFLGV_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2013,6 +2069,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000237 name: disturbance flag +def: "This EcoSIM parameter species whether to reset soil profile after some triggering events, like erosion or tillage." [] comment: FlagDataType.txt synonym: "iResetSoilProf_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2020,6 +2077,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000238 name: banded NH4 fertilizer flag +def: "This flag indicates wheter NH4 is applied with broadcast." [] comment: FlagDataType.txt synonym: "IFNHB_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2027,6 +2085,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000239 name: banded NO3 fertilizer flag +def: "This flag indicates wheter NO3 is applied with broadcast." [] comment: FlagDataType.txt synonym: "IFNOB_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2034,6 +2093,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000240 name: banded H2PO4 fertilizer flag +def: "This flag indicates whether H2PO4 is applied with broadcast" [] comment: FlagDataType.txt synonym: "IFPOB_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2041,6 +2101,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000241 name: flag for calculating FC(1),WP(2),SCNV(3),SCNH(4) +def: "This indicates whether the model has input soil properties or has to compute based on soil texture and soil organic matter." [] comment: FlagDataType.txt synonym: "ISOIL_vr" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2048,6 +2109,7 @@ is_a: bervo:BERVO_9000003 ! flag data type [Term] id: bervo:BERVO_0000242 name: natural(0),reconstructed(1) soil profile +def: "This indicates the soil input type, whether is natural or reconstruction " [] comment: FlagDataType.txt synonym: "ISOILR_col" RELATED [] is_a: bervo:BERVO_9000003 ! flag data type @@ -2517,7 +2579,7 @@ id: bervo:BERVO_0000292 name: total soil H2 comment: EcoSimSumDataType.txt synonym: "TSoilH2G_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2525,7 +2587,7 @@ id: bervo:BERVO_0000293 name: total soil gas comment: EcoSimSumDataType.txt synonym: "SurfGas_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2533,7 +2595,7 @@ id: bervo:BERVO_0000294 name: total plant element (C,N,P, etc) balance comment: EcoSimSumDataType.txt synonym: "PlantElemntStoreLandscape" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2541,7 +2603,7 @@ id: bervo:BERVO_0000295 name: cumulative H2 loss through lateral and lower boundaries comment: EcoSimSumDataType.txt synonym: "H2GOU" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2550,7 +2612,7 @@ name: total soil ion content def: "Total soil ion content refers to the sum of all the ion concentrations in a soil sample. It is an aggregate measure of the total quantity of ions present, which could include essential plant nutrients like nitrogen (N), phosphorous (P), and potassium (K), as well as other elements. This measurement is useful in determining soil fertility and nutrient availability for plant growth." [] comment: EcoSimSumDataType.txt synonym: "TION" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Content property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/mol%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Soil @@ -2561,7 +2623,7 @@ id: bervo:BERVO_0000297 name: total surface ion flux comment: EcoSimSumDataType.txt synonym: "TIONIN" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/mol%20d-2 [Term] @@ -2570,7 +2632,7 @@ name: total subsurface ion flux def: "Total subsurface ion flux refers to the total movement of ions, or charged particles, within the subsurface or subsurface waters. This includes both the downward movement of ions through the soil profile (leaching) and the upward movement of ions from the subsurface to the surface (capillary rise or upward diffusion). It is a crucial factor in nutrient cycling, soil chemistry, and water quality." [] comment: EcoSimSumDataType.txt synonym: "TIONOU" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/mol%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Subsurface property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Ion @@ -2580,7 +2642,7 @@ id: bervo:BERVO_0000299 name: total soil sediment comment: EcoSimSumDataType.txt synonym: "TSEDSO" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/Mg%20d-2 [Term] @@ -2589,7 +2651,7 @@ name: total sediment subsurface flux def: "Total sediment subsurface flux refers to the total amount of sediment that is transported below the surface level due to natural processes such as soil erosion, landslide, and others. It is an important measure in the study of land degradation, soil conservation, and sediment transport." [] comment: EcoSimSumDataType.txt synonym: "TSedmErossLoss_lnds" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/Mg%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Subsurface @@ -2601,7 +2663,7 @@ name: total soil water content def: "Total soil water content refers to the volume of water contained within a soil sample, usually expressed as a percentage of the total volume of the soil. It is an important parameter in the study of soil and environmental sciences because it affects various physical, chemical, and biological properties of the soil such as its permeability, nutrient cycling, and microbial activity. Soil water content is also a critical factor for plant growth as it affects the availability of water for plant uptake." [] comment: EcoSimSumDataType.txt synonym: "WatMassStore_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/WaterContent property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Soil @@ -2611,7 +2673,7 @@ id: bervo:BERVO_0000302 name: total soil heat content comment: EcoSimSumDataType.txt synonym: "HeatStore_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2 [Term] @@ -2619,7 +2681,7 @@ id: bervo:BERVO_0000303 name: total soil O2 content comment: EcoSimSumDataType.txt synonym: "TSoilO2G_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2627,7 +2689,7 @@ id: bervo:BERVO_0000304 name: total soil litter OM content comment: EcoSimSumDataType.txt synonym: "LitRMStoreLndscap" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2635,7 +2697,7 @@ id: bervo:BERVO_0000305 name: total soil POM + humus C content comment: EcoSimSumDataType.txt synonym: "POMHumStoreLndscap" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2643,7 +2705,7 @@ id: bervo:BERVO_0000306 name: total soil NH4 content comment: EcoSimSumDataType.txt synonym: "TDisolNH4_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2651,7 +2713,7 @@ id: bervo:BERVO_0000307 name: total soil NO3 content comment: EcoSimSumDataType.txt synonym: "tNO3_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2660,7 +2722,7 @@ name: total soil PO4 content def: "Total soil PO4 content refers to the collective amount of phosphate (PO4) ions held within the soil. Phosphate is a form of phosphorus which is considered an essential nutrient for plant life. It is necessary for various biological processes including energy metabolism and the synthesis of nucleic acids. The total soil PO4 content can influence nutrient availability and uptake by plants, as well as overall soil fertility. Assessing the total soil PO4 content is important for agricultural practices and soil management strategies." [] comment: EcoSimSumDataType.txt synonym: "TDisolPi_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Soil property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/PO4 @@ -2671,7 +2733,7 @@ name: total precipitation def: "Total precipitation refers to the sum of all forms of precipitation, including rain, snow, sleet, and hail, over a certain period. It is a crucial element of the Earth’s water cycle, and its measurement is critical for meteorology, hydrology, and climatology. Notably, total precipitation enables the quantification of water resources and facilitates the understanding of weather patterns and climate change." [] comment: EcoSimSumDataType.txt synonym: "CRAIN_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Atmosphere property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Water @@ -2681,7 +2743,7 @@ id: bervo:BERVO_0000310 name: total surface heat flux comment: EcoSimSumDataType.txt synonym: "HEATIN_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2 [Term] @@ -2689,7 +2751,7 @@ id: bervo:BERVO_0000311 name: total organic C amendment comment: EcoSimSumDataType.txt synonym: "tAmendOrgC_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2697,7 +2759,7 @@ id: bervo:BERVO_0000312 name: total organic N amendment comment: EcoSimSumDataType.txt synonym: "TORGN" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2705,7 +2767,7 @@ id: bervo:BERVO_0000313 name: total organic P amendment comment: EcoSimSumDataType.txt synonym: "TORGP" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2714,7 +2776,7 @@ name: total subsurface water flux def: "Total subsurface water flux refers to the collective movement of water below the surface of the Earth, including through soil, substrates, and aquifers. It represents the sum of various flux-related processes such as infiltration, percolation, groundwater flow, and capillary rise. This parameter plays a crucial role in hydrology and Earth system modeling, influencing various processes like nutrient cycling, crop production, and ecosystem functioning, as well as human activities such as water supply and irrigation practices." [] comment: EcoSimSumDataType.txt synonym: "QH2OLoss_lnds" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/WaterFlux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Subsurface @@ -2725,7 +2787,7 @@ name: total evaporation def: "Total evaporation, or evapotranspiration, is the sum of evaporation and plant transpiration from the Earth's land and ocean surface to the atmosphere. It is an important part of the water cycle, and affects micro and macro climate." [] comment: EcoSimSumDataType.txt synonym: "CEVAP" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Evaporation property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Water @@ -2736,7 +2798,7 @@ name: total surface runoff def: "Total surface runoff, commonly referred to as 'runoff', is the part of the water cycle that flows over land as surface water instead of being absorbed into the ground or evaporating into the air. It is a major component of the water cycle, and it is responsible for transporting water from the land to the ocean. Runoff can originate from rain, snowmelt, and other forms of precipitation, and it is major source of water pollution, carrying surface pollutants through the environment. In Earth systems modeling, total surface runoff is a key variable which helps us understand and simulate the water flow within a catchment area." [] comment: EcoSimSumDataType.txt synonym: "CRUN" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Runoff property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Water @@ -2746,7 +2808,7 @@ id: bervo:BERVO_0000317 name: total subsurface heat flux comment: EcoSimSumDataType.txt synonym: "HeatOut_lnds" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2 [Term] @@ -2754,7 +2816,7 @@ id: bervo:BERVO_0000318 name: total subsurface O2 flux comment: EcoSimSumDataType.txt synonym: "OXYGOU" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2762,7 +2824,7 @@ id: bervo:BERVO_0000319 name: total subsurface C flux comment: EcoSimSumDataType.txt synonym: "TOMOU_lnds" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2770,7 +2832,7 @@ id: bervo:BERVO_0000320 name: total surface N flux comment: EcoSimSumDataType.txt synonym: "TZIN" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2778,7 +2840,7 @@ id: bervo:BERVO_0000321 name: total surface P flux comment: EcoSimSumDataType.txt synonym: "TPIN" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2786,7 +2848,7 @@ id: bervo:BERVO_0000323 name: total soil CO2 comment: EcoSimSumDataType.txt synonym: "TGasC_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -2794,7 +2856,7 @@ id: bervo:BERVO_0000324 name: total soil N2 comment: EcoSimSumDataType.txt synonym: "TGasN_lnd" RELATED [] -is_a: bervo:BERVO_9000005 ! ecosim sum data type +is_a: bervo:BERVO_9000005 ! sum data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -5916,7 +5978,7 @@ name: Altitude of landscape def: "The altitude of a landscape refers to the vertical distance between a specific point on the Earth's surface and a reference point, usually sea level. It is an important parameter in Earth system modeling as it influences a wide range of physical and biological processes, including temperature, precipitation patterns, atmospheric circulation, and distribution of plant and animal species. Altitude is typically measured in meters or feet and is essential for accurately simulating and analyzing the behavior and interactions of Earth's systems." [] comment: LandSurfDataType.txt synonym: "ALTIG" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Altitude property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Landscape @@ -5926,7 +5988,7 @@ id: bervo:BERVO_0000671 name: Initial soil surface roughness height comment: LandSurfDataType.txt synonym: "SoilSurfRoughnesst0_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -5934,7 +5996,7 @@ id: bervo:BERVO_0000672 name: Zero plane displacement height comment: LandSurfDataType.txt synonym: "ZERO4PlantDisplace_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -5942,7 +6004,7 @@ id: bervo:BERVO_0000673 name: Canopy surface roughness height comment: LandSurfDataType.txt synonym: "RoughHeight_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -5950,7 +6012,7 @@ id: bervo:BERVO_0000674 name: Soil surface roughness height for calculating runoff velocity comment: LandSurfDataType.txt synonym: "SoiSurfRoughness" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -5958,7 +6020,7 @@ id: bervo:BERVO_0000675 name: Wind speed measurement height comment: LandSurfDataType.txt synonym: "WindMesureHeight_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -5967,7 +6029,7 @@ name: Altitude of grid cell def: "The altitude of a grid cell refers to the vertical distance between the surface of the Earth and a specific point within the grid cell. It is a parameter used in earth systems modeling to account for the variation in elevation across different regions. Altitude plays a crucial role in determining temperature, precipitation patterns, atmospheric pressure, and other important climate variables within a grid cell." [] comment: LandSurfDataType.txt synonym: "ALT_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Altitude property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/GridCell @@ -5979,7 +6041,7 @@ name: Isothermal boundary layer resistance def: "Isothermal boundary layer resistance refers to the measure of resistance that a uniform and constant temperature boundary layer imposes on the exchange of heat and moisture between the surface and the atmosphere in Earth system models. It quantifies the hindrance that the boundary layer presents to the transport and mixing of energy and water vapor, which can significantly influence the surface energy balance and atmospheric processes. This parameter is particularly relevant for simulating and understanding the interactions between the land surface and the lower atmosphere within Earth system models." [] comment: LandSurfDataType.txt synonym: "AbvCanopyBndlResist_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h%20m-1 [Term] @@ -5987,7 +6049,7 @@ id: bervo:BERVO_0000678 name: Richardson number for calculating boundary layer resistance comment: LandSurfDataType.txt synonym: "RIB_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type [Term] id: bervo:BERVO_0000680 @@ -5995,21 +6057,21 @@ name: sine of slope def: "The value obtained from the mathematical function of sine applied to the gradient or slope. It is often used in various calculations in earth system sciences, such as those related to hill slopes, flow directions, and solar radiation." [] comment: LandSurfDataType.txt synonym: "SineGrndSlope_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type [Term] id: bervo:BERVO_0000681 name: cosine of slope comment: LandSurfDataType.txt synonym: "CosineGrndSlope_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type [Term] id: bervo:BERVO_0000682 name: azimuth of slope comment: LandSurfDataType.txt synonym: "GroundSurfAzimuth_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Slope [Term] @@ -6017,7 +6079,7 @@ id: bervo:BERVO_0000683 name: altitude comment: LandSurfDataType.txt synonym: "ALTZ_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -6025,7 +6087,7 @@ id: bervo:BERVO_0000684 name: slope comment: LandSurfDataType.txt synonym: "SL_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/degree [Term] @@ -6034,7 +6096,7 @@ name: aspect def: "Aspect refers to the spatial orientation or direction in which a land surface or geographical feature faces. It is typically expressed in terms of compass directions, such as north, south, east, or west. Aspect plays a significant role in various earth system processes, such as solar radiation patterns, temperature distribution, and vegetation growth. It is an important parameter in earth systems modeling as it affects the spatial distribution of climate variables and influences ecosystem dynamics at local and regional scales." [] comment: LandSurfDataType.txt synonym: "ASP_col" RELATED [] -is_a: bervo:BERVO_9000009 ! land surf data type +is_a: bervo:BERVO_9000009 ! land surface data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/degree property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/LandSurface @@ -10030,7 +10092,7 @@ id: bervo:BERVO_0001139 name: surface litter bulk density comment: SurfLitterDataType.txt synonym: "BulkDensLitR" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/Mg%20m-3 [Term] @@ -10039,7 +10101,7 @@ name: surface litter boundary layer conductance def: "Surface litter boundary layer conductance refers to the rate of energy or mass transfer from the litter layer on the surface of the soil to the atmosphere. This is largely dependent on factors such as litter type, structure, and moisture content, along with atmospheric conditions such as wind speed, temperature, and humidity." [] comment: SurfLitterDataType.txt synonym: "PARR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Context http://www.w3.org/2002/07/BoundaryLayer property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/GroundSurface @@ -10049,14 +10111,14 @@ id: bervo:BERVO_0001141 name: surface litter type:1 = plant, 2 = manure comment: SurfLitterDataType.txt synonym: "iLitrType_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type [Term] id: bervo:BERVO_0001142 name: factor for surface litter incorporation and soil mixing comment: SurfLitterDataType.txt synonym: "XTillCorp_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type [Term] id: bervo:BERVO_0001143 @@ -10064,7 +10126,7 @@ name: water transfer between soil surface and surface litter def: "Water transfer between soil surface and surface litter this variable represents the movement of water between the soil surface and the surface litter, or organic material, that covers the soil. This exchange of water can occur through various processes, including direct contact, capillary action, and gravitational movement. The amount and rate of water transfer can vary depending on factors such as soil properties, litter characteristics, and environmental conditions. Understanding this water exchange is important for modeling and simulating soil hydrology, soil moisture dynamics, and overall ecosystem functioning." [] comment: SurfLitterDataType.txt synonym: "WatFLoLitr2SoilM_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SoilSurface property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SurfaceLitter @@ -10075,7 +10137,7 @@ id: bervo:BERVO_0001144 name: meltwater flux into surface litter comment: SurfLitterDataType.txt synonym: "WatFlowSno2LitRM_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 [Term] @@ -10084,7 +10146,7 @@ name: fraction of soil surface covered by surface litter def: "FracSurfByLitR refers to the proportion of the soil surface that is covered by surface litter. Surface litter refers to the layer of fallen leaves, twigs, bark, and other organic material that covers the soil surface. It plays a crucial role in the nutrient cycling processes in ecosystems, providing a source of nutrients and organic matter to the soil below and offering protection against soil erosion." [] comment: SurfLitterDataType.txt synonym: "FracSurfByLitR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Context http://www.w3.org/2002/07/SurfaceLitter property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SoilSurface @@ -10093,7 +10155,7 @@ id: bervo:BERVO_0001146 name: net heat transfer to surface litter comment: SurfLitterDataType.txt synonym: "HeatFLoByWat2LitR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 [Term] @@ -10101,7 +10163,7 @@ id: bervo:BERVO_0001147 name: surface litter volume comment: SurfLitterDataType.txt synonym: "VLitR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Volume property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SurfaceLitter @@ -10112,7 +10174,7 @@ name: threshold surface litter heat capacity def: "Threshold surface litter heat capacity refers to the minimum amount of heat energy required to change the temperature of a given amount of surface litter by a certain degree. It is an important parameter in the modelling of fire dynamics and the effects of wildfires on ecosystems, as it helps to determine the susceptiblity of surface litter to ignition and combustion." [] comment: SurfLitterDataType.txt synonym: "VHeatCapLitRMin_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/HeatCapacity property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20K-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SurfaceLitter @@ -10122,7 +10184,7 @@ id: bervo:BERVO_0001149 name: surface litter water holding capacity comment: SurfLitterDataType.txt synonym: "VWatLitRHoldCapcity_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 [Term] @@ -10131,7 +10193,7 @@ name: net water transfer to surface litter def: "Net water transfer to surface litter refers to the total amount of water that is transferred to the surface litter layer of an ecosystem from other parts of the ecosystem, over a given period of time. The surface litter layer, which is made up of decomposing organic matter such as dead leaves, grasses, and other plant materials, plays a crucial role in the hydrological cycle of the ecosystem. This process is an essential aspect of water cycle in ecosystems, influencing soil moisture levels, nutrient cycling, and the overall health and functioning of the ecosystem." [] comment: SurfLitterDataType.txt synonym: "WatFLo2LitR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Litter property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Water @@ -10142,7 +10204,7 @@ id: bervo:BERVO_0001151 name: water from ice thaw in surface litter comment: SurfLitterDataType.txt synonym: "TLitrIceFlxThaw_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 [Term] @@ -10150,7 +10212,7 @@ id: bervo:BERVO_0001152 name: latent heat released from water freeze in surface litter comment: SurfLitterDataType.txt synonym: "TLitrIceHeatFlxFrez_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20h-1 [Term] @@ -10159,7 +10221,7 @@ name: precipitation flux into surface litter def: "Precipitation flux into surface litter refers to the flow rate of precipitation, such as rain, snowfall, or dew, into the surface litter layer of an ecosystem. Surface litter, which consists of dead plant material such as leaves and twigs, plays a critical role in nutrient cycling and soil formation. Measurement of this precipitation flux is important for understanding the hydrological dynamics of an ecosystem, particularly the processes of infiltration and percolation." [] comment: SurfLitterDataType.txt synonym: "Rain2LitRSurf_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SurfaceLitter @@ -10171,7 +10233,7 @@ name: irrigation flux into surface litter def: "Irrigation flux into surface litter quantifies the amount of water added to the surface litter layer of the soil through irrigation. Surface litter refers to the organic material, such as dead leaves, twigs, and other plant residues, that covers the soil surface. This process can affect the moisture content and decomposition rates of the surface litter, affecting nutrient cycling and soil fertility." [] comment: SurfLitterDataType.txt synonym: "Irrig2LitRSurf_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SurfaceLitter @@ -10182,7 +10244,7 @@ id: bervo:BERVO_0001155 name: litter porosity comment: SurfLitterDataType.txt synonym: "POROS0_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20pore%20m-3%20litr [Term] @@ -10190,7 +10252,7 @@ id: bervo:BERVO_0001156 name: surface litter OM in each complex comment: SurfLitterDataType.txt synonym: "RC0_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -10198,7 +10260,7 @@ id: bervo:BERVO_0001157 name: surface litter OM in the autotrophic complex comment: SurfLitterDataType.txt synonym: "RC0ff_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20d-2 [Term] @@ -10206,7 +10268,7 @@ id: bervo:BERVO_0001158 name: total inital water mass in litter layer comment: SurfLitterDataType.txt synonym: "LitWatMassBeg_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H2O%20d-2 [Term] @@ -10214,7 +10276,7 @@ id: bervo:BERVO_0001159 name: total final water mass in litter layer comment: SurfLitterDataType.txt synonym: "LitWatMassEnd_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H2O%20d-2 [Term] @@ -10222,7 +10284,7 @@ id: bervo:BERVO_0001160 name: total precipiation reaches the litter layer comment: SurfLitterDataType.txt synonym: "Rain2LitR_col" RELATED [] -is_a: bervo:BERVO_9000017 ! surf litter data type +is_a: bervo:BERVO_9000017 ! surface litter data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H3O%20d-2%20h-1 [Term] @@ -11168,7 +11230,7 @@ id: bervo:BERVO_0001280 name: seconds per hour comment: EcoSimConst.txt synonym: "secsphour" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/s/hour [Term] @@ -11176,7 +11238,7 @@ id: bervo:BERVO_0001281 name: seconds per day comment: EcoSimConst.txt synonym: "secspday" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/s/day [Term] @@ -11184,14 +11246,14 @@ id: bervo:BERVO_0001282 name: seconds in a normal year comment: EcoSimConst.txt synonym: "secspyear" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001283 name: volumetric heat capacity for water comment: EcoSimConst.txt synonym: "cpw" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/J/g/K~MJ/m3/K [Term] @@ -11199,7 +11261,7 @@ id: bervo:BERVO_0001284 name: volumetric heat capacity for ice comment: EcoSimConst.txt synonym: "cpi" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/m3/K [Term] @@ -11207,7 +11269,7 @@ id: bervo:BERVO_0001285 name: heat capacity for organic matter comment: EcoSimConst.txt synonym: "cpo" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/K/gC [Term] @@ -11215,7 +11277,7 @@ id: bervo:BERVO_0001286 name: volumetric heat capacity for fresh snow comment: EcoSimConst.txt synonym: "cps" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/m3/K [Term] @@ -11223,7 +11285,7 @@ id: bervo:BERVO_0001287 name: frozen temperature comment: EcoSimConst.txt synonym: "TFice" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/K [Term] @@ -11231,7 +11293,7 @@ id: bervo:BERVO_0001288 name: temperature for converting celcius to Kelvin comment: EcoSimConst.txt synonym: "TC2K" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/K [Term] @@ -11239,7 +11301,7 @@ id: bervo:BERVO_0001289 name: reference temperature for atmospheric variables comment: EcoSimConst.txt synonym: "Tref" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/K [Term] @@ -11247,7 +11309,7 @@ id: bervo:BERVO_0001290 name: minimum heat capacities for solving snowpack layered water and heat fluxes comment: EcoSimConst.txt synonym: "VLHeatCapSnoMin" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/K [Term] @@ -11255,7 +11317,7 @@ id: bervo:BERVO_0001291 name: minimum heat capacities for solving surface litter water and heat fluxes comment: EcoSimConst.txt synonym: "VLHeatCapLitRMin" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/K [Term] @@ -11263,7 +11325,7 @@ id: bervo:BERVO_0001292 name: minimum heat capacities for solving soil water and heat fluxes comment: EcoSimConst.txt synonym: "VLHeatCapSoiMin" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ/K [Term] @@ -11271,28 +11333,28 @@ id: bervo:BERVO_0001293 name: Pi comment: EcoSimConst.txt synonym: "PICON" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001294 name: Pi/2 comment: EcoSimConst.txt synonym: "PICON2h" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001295 name: 2Pi comment: EcoSimConst.txt synonym: "TwoPiCON" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001296 name: saturated water pressure comment: EcoSimConst.txt synonym: "PSIPS" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/Mpa [Term] @@ -11300,7 +11362,7 @@ id: bervo:BERVO_0001297 name: pi/180 comment: EcoSimConst.txt synonym: "RadianPerDegree" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/rad/degree [Term] @@ -11308,7 +11370,7 @@ id: bervo:BERVO_0001298 name: latent heat of fusion release from water to ice comment: EcoSimConst.txt synonym: "LtHeatIceMelt" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/kJ/kg [Term] @@ -11316,7 +11378,7 @@ id: bervo:BERVO_0001299 name: latent heat of vaporization of water comment: EcoSimConst.txt synonym: "EvapLHTC" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/kJ/kg [Term] @@ -11324,7 +11386,7 @@ id: bervo:BERVO_0001300 name: sublimation of ice comment: EcoSimConst.txt synonym: "SublmHTC" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/kJ/kg [Term] @@ -11332,7 +11394,7 @@ id: bervo:BERVO_0001301 name: assumed thermal conductivity below lower soil boundary comment: EcoSimConst.txt synonym: "TCNDG" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20m-1%20h-1%20K-1 [Term] @@ -11340,7 +11402,7 @@ id: bervo:BERVO_0001302 name: universal gas constant comment: EcoSimConst.txt synonym: "RGASC" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/J%20(mole%20K)%5E-1 [Term] @@ -11348,7 +11410,7 @@ id: bervo:BERVO_0001303 name: density of organic carbon comment: EcoSimConst.txt synonym: "orgcden" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gC%20m-3 [Term] @@ -11356,7 +11418,7 @@ id: bervo:BERVO_0001304 name: elapsing height for atmospheric pressure comment: EcoSimConst.txt synonym: "hpresc" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -11364,14 +11426,14 @@ id: bervo:BERVO_0001305 name: soil porosity ^ 2/3 comment: EcoSimConst.txt synonym: "POROQ" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001306 name: minimum SOC for combustion comment: EcoSimConst.txt synonym: "FORGC" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g%20Mg-1 [Term] @@ -11379,7 +11441,7 @@ id: bervo:BERVO_0001307 name: maximum soil water content for combustion comment: EcoSimConst.txt synonym: "VolMaxSoilMoist4Fire" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20m-3 [Term] @@ -11387,14 +11449,14 @@ id: bervo:BERVO_0001308 name: fraction of combusted C released as CH4 comment: EcoSimConst.txt synonym: "FrcAsCH4byFire" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001309 name: hygroscopic water potential, very dry (but not air dry) comment: EcoSimConst.txt synonym: "PSIHY" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MPa [Term] @@ -11402,7 +11464,7 @@ id: bervo:BERVO_0001310 name: Km for heterotrophic O2 uptake comment: EcoSimConst.txt synonym: "OXKM" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/gO%20m-3 [Term] @@ -11410,7 +11472,7 @@ id: bervo:BERVO_0001311 name: minimum air-filled porosity for gas transfer comment: EcoSimConst.txt synonym: "AirFillPore_Min" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20m-3 [Term] @@ -11418,7 +11480,7 @@ id: bervo:BERVO_0001312 name: air content of ice comment: EcoSimConst.txt synonym: "THETPI" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20m-3 [Term] @@ -11426,7 +11488,7 @@ id: bervo:BERVO_0001313 name: ice density comment: EcoSimConst.txt synonym: "DENSICE" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g/cm3~ton/m3 [Term] @@ -11434,7 +11496,7 @@ id: bervo:BERVO_0001314 name: snowpack surface roughness comment: EcoSimConst.txt synonym: "ZW" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m [Term] @@ -11442,7 +11504,7 @@ id: bervo:BERVO_0001315 name: C-12 molar mass comment: EcoSimConst.txt synonym: "Catomw" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g/mol [Term] @@ -11450,7 +11512,7 @@ id: bervo:BERVO_0001316 name: N-14 molar mass comment: EcoSimConst.txt synonym: "Natomw" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g/mol [Term] @@ -11458,7 +11520,7 @@ id: bervo:BERVO_0001317 name: P-31 molar mass comment: EcoSimConst.txt synonym: "Patomw" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/g/mol [Term] @@ -11466,14 +11528,14 @@ id: bervo:BERVO_0001318 name: sine of solar inclination angle at twilight comment: EcoSimConst.txt synonym: "TWILGT" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant [Term] id: bervo:BERVO_0001319 name: multiplier to convert organic carbon (g C/d2) to soil mass (Mg/d2) comment: EcoSimConst.txt synonym: "MWC2Soil" RELATED [] -is_a: bervo:BERVO_9000020 ! ecosim constant +is_a: bervo:BERVO_9000020 ! constant property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/Mg%20soil/gC [Term] @@ -12367,28 +12429,28 @@ id: bervo:BERVO_0001439 name: fraction of snow cover comment: SurfSoilDataType.txt synonym: "FracSurfAsSnow_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type [Term] id: bervo:BERVO_0001440 name: fraction of snow-free cover comment: SurfSoilDataType.txt synonym: "FracSurfSnoFree_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type [Term] id: bervo:BERVO_0001441 name: fraction of exposed soil surface comment: SurfSoilDataType.txt synonym: "FracSurfBareSoil_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type [Term] id: bervo:BERVO_0001442 name: longwave radiation emitted from ground surface comment: SurfSoilDataType.txt synonym: "LWRadBySurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 [Term] @@ -12396,7 +12458,7 @@ id: bervo:BERVO_0001443 name: total net radiation at ground surface comment: SurfSoilDataType.txt synonym: "HeatByRad2Surf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 [Term] @@ -12404,7 +12466,7 @@ id: bervo:BERVO_0001444 name: total latent heat flux at ground surface comment: SurfSoilDataType.txt synonym: "HeatEvapAir2Surf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 [Term] @@ -12413,7 +12475,7 @@ name: total sensible heat flux at ground surface def: "Total sensible heat flux at ground surface refers to the total amount of energy, in Joules (J), transferred from the ground surface to the atmosphere as a result of differences in temperature. This process is one of the main ways energy is exchanged between the surface and the atmosphere, impacting climate and weather patterns." [] comment: SurfSoilDataType.txt synonym: "HeatSensAir2Surf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/GroundSurface property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/Energy @@ -12424,7 +12486,7 @@ name: total convective heat flux at ground surface def: "Total convective heat flux at ground surface refers to the total amount of heat transferred by convection from the air to the ground surface. This parameter is important in meteorology and climate science as it influences local air temperatures, weather patterns, and the overall energy balance of the Earth's surface. It is usually expressed in watts per square meter (W/m²)." [] comment: SurfSoilDataType.txt synonym: "HeatSensVapAir2Surf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/Air @@ -12437,7 +12499,7 @@ name: total ground heat flux at ground surface def: "Total ground heat flux at ground surface, often expressed in watts per square meter (W/m²), refers to the rate at which heat energy is transferred to the ground surface. It is an important component of the Earth's surface energy balance and can have significant impacts on climate, weather patterns, and physical processes in the Earth's surface and subsurface." [] comment: SurfSoilDataType.txt synonym: "HeatNet2Surf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_Context http://www.w3.org/2002/07/GroundSurface property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20d-2%20t-1 @@ -12450,7 +12512,7 @@ name: negative of total evaporation at ground surface def: "Negative of total evaporation at ground surface refers to the negative amount of the total water evaporated from the ground surface, including water bodies, soil surface and plant surfaces. This value indicates the rate or speed at which water changes from a liquid to a gas or vapor state. This evaporation can occur due to solar radiation, wind, temperature, air pressure, and other environmental conditions." [] comment: SurfSoilDataType.txt synonym: "VapXAir2GSurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20t-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/GroundSurface property_value: bervo:BERVO_measurement_of http://www.w3.org/2002/07/TotalEvaporation @@ -12460,7 +12522,7 @@ id: bervo:BERVO_0001449 name: surface water storage capacity comment: SurfSoilDataType.txt synonym: "VWatStoreCapSurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 [Term] @@ -12468,7 +12530,7 @@ id: bervo:BERVO_0001450 name: soil surface water retention capacity comment: SurfSoilDataType.txt synonym: "VLWatHeldCapSurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2 [Term] @@ -12476,7 +12538,7 @@ id: bervo:BERVO_0001451 name: minimum heat capacities comment: SurfSoilDataType.txt synonym: "VHCPNX_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/MJ%20k-1%20d-2 [Term] @@ -12484,7 +12546,7 @@ id: bervo:BERVO_0001452 name: area upscaled soil surface boundary layer conductance comment: SurfSoilDataType.txt synonym: "CondGasXSnowM_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m%20d-2 [Term] @@ -12493,7 +12555,7 @@ name: precipitation flux into soil surface def: "Precipitation flux into soil surface refers to the rate at which water (from rainfall, snow melt, etc.) enters the soil surface per unit area. This parameter is crucial in hydrological studies and modeling, as it impacts soil moisture levels, groundwater recharge, runoff generation and erosion." [] comment: SurfSoilDataType.txt synonym: "Rain2SoilSurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_Context http://www.w3.org/2002/07/Precipitation property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 @@ -12506,7 +12568,7 @@ name: irrifation flux into soil surface def: "Irrigation flux into soil surface refers to the rate at which water from irrigation enters the soil surface. This is an important factor in agricultural management and water resource planning as it directly influences the amount of water available to crops and its effectiveness in promoting plant growth. Measurements of this parameter can help optimize irrigation strategies and conserve water resources." [] comment: SurfSoilDataType.txt synonym: "Irrig2SoilSurf_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_Attribute http://www.w3.org/2002/07/Flux property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 property_value: bervo:BERVO_measured_in http://www.w3.org/2002/07/SoilSurface @@ -12517,7 +12579,7 @@ id: bervo:BERVO_0001455 name: lake surface water flux comment: SurfSoilDataType.txt synonym: "LakeSurfFlowMicP_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 [Term] @@ -12525,7 +12587,7 @@ id: bervo:BERVO_0001458 name: lake surface heat flux, outgoing positive comment: SurfSoilDataType.txt synonym: "LakeSurfHeatFlux_col" RELATED [] -is_a: bervo:BERVO_9000022 ! surf and soil data type +is_a: bervo:BERVO_9000022 ! surface and soil data type property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20d-2%20h-1 [Term] @@ -15183,28 +15245,28 @@ is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001778 -name: sclar for northern subsurface boundary water flux +name: scalar for northern subsurface boundary water flux comment: SoilWaterDataType.txt synonym: "RechrgDistNorthSubSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001779 -name: sclar for eastern subsurface boundary water flux +name: scalar for eastern subsurface boundary water flux comment: SoilWaterDataType.txt synonym: "RechrgDistEastSubSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001780 -name: sclar for southern subsurface boundary water flux +name: scalar for southern subsurface boundary water flux comment: SoilWaterDataType.txt synonym: "RechrgDistSouthSubSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001781 -name: sclar for western subsurface boundary water flux +name: scalar for western subsurface boundary water flux comment: SoilWaterDataType.txt synonym: "RechrgDistWestSubSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type @@ -15243,35 +15305,35 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/h-1 [Term] id: bervo:BERVO_0001786 -name: sclar for northern surface boundary water flux +name: scalar for northern surface boundary water flux comment: SoilWaterDataType.txt synonym: "RechargNorthSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001787 -name: sclar for eastern surface boundary water flux +name: scalar for eastern surface boundary water flux comment: SoilWaterDataType.txt synonym: "RechargEastSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001788 -name: sclar for southern surface boundary water flux +name: scalar for southern surface boundary water flux comment: SoilWaterDataType.txt synonym: "RechargSouthSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001789 -name: sclar for western surface boundary water flux +name: scalar for western surface boundary water flux comment: SoilWaterDataType.txt synonym: "RechargWestSurf_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type [Term] id: bervo:BERVO_0001790 -name: sclar for lower subsurface boundary water flux +name: scalar for lower subsurface boundary water flux comment: SoilWaterDataType.txt synonym: "RechargBottom_col" RELATED [] is_a: bervo:BERVO_9000032 ! soil and water data type @@ -15605,7 +15667,7 @@ property_value: bervo:BERVO_has_unit http://www.w3.org/2002/07/m3%20H2O%20d-2%20 [Term] id: bervo:BERVO_9000000 -name: ecosim biogeochemical flux type +name: biogeochemical flux type comment: EcosimBGCFluxType.txt synonym: "EcosimBGCFluxType" RELATED [] is_a: bervo:BERVO_0000000 ! variable @@ -15640,7 +15702,7 @@ is_a: bervo:BERVO_0000000 ! variable [Term] id: bervo:BERVO_9000005 -name: ecosim sum data type +name: sum data type comment: EcoSimSumDataType.txt synonym: "EcoSimSumDataType" RELATED [] is_a: bervo:BERVO_0000000 ! variable @@ -15668,7 +15730,7 @@ is_a: bervo:BERVO_0000000 ! variable [Term] id: bervo:BERVO_9000009 -name: land surf data type +name: land surface data type comment: LandSurfDataType.txt synonym: "LandSurfDataType" RELATED [] is_a: bervo:BERVO_0000000 ! variable @@ -15724,7 +15786,7 @@ is_a: bervo:BERVO_0000000 ! variable [Term] id: bervo:BERVO_9000017 -name: surf litter data type +name: surface litter data type comment: SurfLitterDataType.txt synonym: "SurfLitterDataType" RELATED [] is_a: bervo:BERVO_0000000 ! variable @@ -15745,7 +15807,7 @@ is_a: bervo:BERVO_0000000 ! variable [Term] id: bervo:BERVO_9000020 -name: ecosim constant +name: constant comment: EcoSimConst.txt synonym: "EcoSimConst" RELATED [] is_a: bervo:BERVO_0000000 ! variable @@ -15759,7 +15821,7 @@ is_a: bervo:BERVO_0000000 ! variable [Term] id: bervo:BERVO_9000022 -name: surf and soil data type +name: surface and soil data type comment: SurfSoilDataType.txt synonym: "SurfSoilDataType" RELATED [] is_a: bervo:BERVO_0000000 ! variable diff --git a/bervo.owl b/bervo.owl index 58ea2b2..0b73f92 100644 --- a/bervo.owl +++ b/bervo.owl @@ -12,11 +12,11 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None BERVO - 2025-07-28 + 2025-08-01 @@ -115,14 +115,6 @@ - - - - root node - - - - @@ -2379,6 +2371,7 @@ + Water associated with leaf biomass FDML GrosubPars.txt leaf water content, (g H2O g-1 C) @@ -2390,6 +2383,7 @@ + Leaf biomass water in bundle sheath cells FBS GrosubPars.txt leaf water content in bundle sheath, in C4 CO2 fixn @@ -2402,6 +2396,7 @@ + Leaf biomass water in mesophyll cells FMP GrosubPars.txt leaf water content in mesophyll in C4 CO2 fixn @@ -2414,6 +2409,7 @@ + Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of leaf. The NC or PC ratios are computed based on leaf stoichiometry. ZPLFM GrosubPars.txt min N:C,P:C in leaves relative to max values from PFT file @@ -2425,6 +2421,7 @@ + Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of grains. The NC or PC ratios are computed based on leaf stoichiometry. ZPGRM GrosubPars.txt min N:C,P:C in grain relative to max values from PFT file @@ -2436,6 +2433,7 @@ + Fraction of stalk area that holds the xylem and phloem tubes for water and metabolite transport between plant organs FSTK GrosubPars.txt fraction of stalk area contributing to water,heat flow @@ -2447,6 +2445,7 @@ + Maxium allowed tube radius to do xylem and phloem transport, located at the out surface of stalk. ZSTX GrosubPars.txt maximum stalk inner radius for tranpsiration @@ -2459,6 +2458,7 @@ + Carbn-based stalk mass denisty used to copmute stalk volume StalkMassDensity GrosubPars.txt stalk density @@ -2471,6 +2471,7 @@ + Stalk volume per g carbon biomass SpecStalkVolume GrosubPars.txt specific volume (m3 gC-1) @@ -2482,6 +2483,7 @@ + It is a model-specific scaling parameter for computing biomass allocation to canopy foliage FRTX GrosubPars.txt Fraction used to calculate woody faction of stalk,root @@ -2493,6 +2495,7 @@ + Half saturation parameter for modeling carbon biomass flow during seed setting using the Michaelis-Menten kinetics SETC GrosubPars.txt Km for nonstructural C concn on seed set @@ -2505,6 +2508,7 @@ + Half saturation parameter for modeling nitrogen biomass flow during seed setting using the Michaelis-Menten kinetics SETN GrosubPars.txt Km for nonstructural N concn on seed set @@ -2517,6 +2521,7 @@ + Half saturation parameter for modeling phosphorus biomass flow during seed setting using the Michaelis-Menten kinetics SETP GrosubPars.txt Km for nonstructural P concn on seed set @@ -2529,6 +2534,7 @@ + An exponent parameter to compute leaf area expansion in the model SLA2 GrosubPars.txt parameter for calculating leaf area expansion @@ -2540,6 +2546,7 @@ + An exponent parameter to compute petiole length expansion in the model SSL2 GrosubPars.txt parameter for calculating petiole extension @@ -2551,6 +2558,7 @@ + an exponent parameter to compuate stalk volume expasion in the model SNL2 GrosubPars.txt parameter for calculating stalk extension @@ -2562,6 +2570,7 @@ + A stoichiometry ratio to compute the minimum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CNMX GrosubPars.txt maximum C:N ratio for nonstructural N transfer @@ -2573,6 +2582,7 @@ + A stoichiometry ratio to compute the minimum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CPMX GrosubPars.txt maximum C:P ratio for nonstructural P transfer @@ -2584,6 +2594,7 @@ + A stoichiometry ratio to compute the maximum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CNMN GrosubPars.txt minimum C:N ratio for nonstructural N transfer @@ -2595,6 +2606,7 @@ + A stoichiometry ratio to compute the maximum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CPMN GrosubPars.txt minimum C:P ratio for nonstructural P transfer @@ -2606,6 +2618,7 @@ + It quantifies how much nitrogen can be fixed from N2 in the form NH3 when one mass unit of carbon is oxidized EN2F GrosubPars.txt N fixation yield from C oxidation @@ -2618,6 +2631,7 @@ + It quantifies how fast nitrogen fixing bacteria can oxidize its nonstructural biomass carbon to support its metabolism. VMXO GrosubPars.txt specific respiration rate by bacterial N2 fixers @@ -2630,6 +2644,7 @@ + The half saturation parameter when the effect of nodule C biomass on its maintenance is modeled using Michaelis-Menten kinetics SPNDLK GrosubPars.txt half saturation parameter for nodule maintenance respiration @@ -2642,6 +2657,7 @@ + It quantifies how fast the N-fixing bacteria lose activity when mortality is modeled using the linear kinetics. SPNDL GrosubPars.txt specific decomposition rate by bacterial N2 fixers @@ -2654,6 +2670,7 @@ + A model-specifc parameter to compute carbon, nitrogen and phosphorus exchange between nodule bacteria and their hosting plants. CCNGR GrosubPars.txt parameter to calculate nonstructural C,N,P exchange @@ -2665,6 +2682,7 @@ + Initial noduble carbon biomass C at the time of infection of the hosting plant. The infection is applied when noduble biomass of the hosting plant is zero. NodulBiomCAtInfection GrosubPars.txt initial bacterial mass at infection @@ -2677,6 +2695,7 @@ + Half saturation parameter for modeling bacterial use of nonstructural nitrogen using the Michaelis-Menten kinetics CZKM GrosubPars.txt Km for nonstructural Nuptake by bacteria @@ -2689,6 +2708,7 @@ + Half saturation parameter for modeling bacterial use of nonstructural phosphorus using the Michaelis-Menten kinetics CPKM GrosubPars.txt Km for nonstructural P uptake by bacteria @@ -2701,6 +2721,7 @@ + Minimum fraction of root C can be recyled during root death RCCZR GrosubPars.txt minimum fractions for root C recycling @@ -2712,6 +2733,7 @@ + Maximum fraction of root C can be recyled during root death RCCYR GrosubPars.txt maximum fractions for root C recycling @@ -2723,6 +2745,7 @@ + Maximum fraction of root nitrogen can be recyled during root death RCCXR GrosubPars.txt maximum fractions for root N recycling @@ -2734,6 +2757,7 @@ + Maximum fraction of root phosphorus can be recyled during root death RCCQR GrosubPars.txt maximum fractions for root P recycling @@ -2745,6 +2769,7 @@ + Minimum fraction of nodule bacteria C can be recyled during root death RCCZN GrosubPars.txt minimum fractions for bacteria C recycling @@ -2756,6 +2781,7 @@ + Maximum fraction of nodule bacteria C can be recyled during root death RCCYN GrosubPars.txt maximum fractions for bacteria C recycling @@ -2767,6 +2793,7 @@ + Maximum fraction of nodule bacteria nitrogen can be recyled during root death RCCXN GrosubPars.txt maximum fractions for bacteria N recycling @@ -2778,6 +2805,7 @@ + Maximum fraction of nodule bacteria phosphorus can be recyled during root death RCCQN GrosubPars.txt maximum fractions for bacteria P recycling @@ -2789,6 +2817,7 @@ + Number of hours need to accumulate to trigger litterfall after leaf maturity HoursReq4LiterfalAftMature GrosubPars.txt required hours after physl maturity until start of LitrFall @@ -2801,6 +2830,7 @@ + Rate parameter to compute the gradient driven carbon and nutrient exchange between seasonal storage and nonstructural pools FRSV GrosubPars.txt rate constant for remobiln of storage chemical element during leafout @@ -2813,6 +2843,7 @@ + Rate parameter to compute the gradient driven carbon exchange between stalk and leaf reserve pools FXFY GrosubPars.txt rate constant for leaf-reserve nonstructural C exchange @@ -2825,6 +2856,7 @@ + Rate parameter to compute the gradient driven nitrogen and phosphorus exchange between stalk and leaf reserve pools FXFZ GrosubPars.txt rate constant for leaf-reserve nonstructural N,P exchange @@ -2837,6 +2869,7 @@ + Rate parameter for gradient-driven nonstructural carbon and nutrient exchange between shoot and seasonal storage pools RateK4ShootSeaStoreNonstEXfer GrosubPars.txt rate constant for leaf-storage nonstructural chemical element exchange @@ -2849,6 +2882,7 @@ + Rate parameter for gradient driven nonstructural carbon and nutrient exchange between root and seasonal storage pools RateK4RootSeaStorNonstEXfer GrosubPars.txt rate constant for root-storage nonstructural chemical element exchange @@ -2861,6 +2895,7 @@ + Fraction of mobilized seasonal storage allocated to roots upon leaf out FXRT GrosubPars.txt root partitioning of storage C during leafout @@ -2872,6 +2907,7 @@ + Fraction of mobilized seasonal storage allocated to shoots upon leaf out FXSH GrosubPars.txt shoot partitioning of storage C during leafout @@ -2883,6 +2919,7 @@ + Rate constant for modeling nonstructural C,N and P exchange between hosting plants and nodule bacteria FXRN GrosubPars.txt rate constant for plant-bacteria nonstructl C,N,P exchange @@ -2895,6 +2932,7 @@ + This parameters specifies the maximum fraction of nitrogen can be recycled upon senescence of plant canopy organs RCCX GrosubPars.txt maximum fractions for shoot N recycling @@ -2906,6 +2944,7 @@ + This parameters specifies the maximum fraction of phosphorus can be recycled upon senescence of plant canopy organs RCCQ GrosubPars.txt maximum fractions for shoot P recycling @@ -2917,6 +2956,7 @@ + This parameters specifies the minimum fraction of carbon can be recycled upon senescence of plant canopy organs RCCZ GrosubPars.txt minimum fractions for shoot C recycling @@ -2928,6 +2968,7 @@ + This parameters specifies the maximum fraction of carbon can be recycled upon senescence of plant canopy organs RCCY GrosubPars.txt maximum fractions for shoot C recycling @@ -2939,6 +2980,7 @@ + This parameters specifies the number of hours required for plant to initiate senescence after maturity Hours4SenesAftMature GrosubPars.txt number of hours after physiol maturity required for senescence @@ -2951,6 +2993,7 @@ + This parameters specifies the number of hours required for plant to initiate storage carbon remobilization after leafout HourReq2InitSStor4LeafOut GrosubPars.txt number of hours required to initiate remobilization of storage C for leafout @@ -2963,6 +3006,7 @@ + This parameters specifies how much seasonal storage C is oxidized to support canopy and root development GVMX GrosubPars.txt specific oxidation rate of nonstructural C during leafout at 25 C @@ -2975,6 +3019,7 @@ + This parameter scales the relative sink strength for non-structural carbon and nutrient for growing primary and secondary roots RTSK GrosubPars.txt relative primary root sink strength 0.25=shallow,4.0=deep root profile @@ -2986,6 +3031,7 @@ + This parameter is obsolete, and was EcoSIM specific. ICLM FlagDataType.txt changes to weather data (0=none,1=step,2=transient) @@ -2997,6 +3043,7 @@ + This parameter is obsolete, and was EcoSIM specific. IMNG FlagDataType.txt flag for land management @@ -3008,6 +3055,7 @@ + This EcoSIM specific flag parameter is used for internal forcing data processing IWTHR FlagDataType.txt weather data type:1=daily,2=hourly for first(L=1) or second(L=2) scene @@ -3019,6 +3067,7 @@ + This specifies what kind of fertilizer is applied in the model, which could be mineral fertilizer, plant residue, or animal maure. IYTYP FlagDataType.txt fertilizer release type from fertilizer input file @@ -3030,6 +3079,7 @@ + This EcoSIM flag parameters specifies what type of disturbances are applied to soil, including tillage, fire, litter removal or drainge. iSoilDisturbType_col FlagDataType.txt soil disturbance type @@ -3041,6 +3091,7 @@ + The Köppen climate zone refers to a region defined by the Köppen climate classification system. KoppenClimZone_col FlagDataType.txt Koppen climate zone @@ -3052,6 +3103,7 @@ + This EcoSIM parameter species how irrigation is triggered, which could be based on soil moisture content or canopy water potential IFLGV_col FlagDataType.txt flag for irrigation criterion,0=SWC,1=canopy water potential @@ -3063,6 +3115,7 @@ + This EcoSIM parameter species whether to reset soil profile after some triggering events, like erosion or tillage. iResetSoilProf_col FlagDataType.txt disturbance flag @@ -3074,6 +3127,7 @@ + This flag indicates wheter NH4 is applied with broadcast. IFNHB_col FlagDataType.txt banded NH4 fertilizer flag @@ -3085,6 +3139,7 @@ + This flag indicates wheter NO3 is applied with broadcast. IFNOB_col FlagDataType.txt banded NO3 fertilizer flag @@ -3096,6 +3151,7 @@ + This flag indicates whether H2PO4 is applied with broadcast IFPOB_col FlagDataType.txt banded H2PO4 fertilizer flag @@ -3107,6 +3163,7 @@ + This indicates whether the model has input soil properties or has to compute based on soil texture and soil organic matter. ISOIL_vr FlagDataType.txt flag for calculating FC(1),WP(2),SCNV(3),SCNH(4) @@ -3118,6 +3175,7 @@ + This indicates the soil input type, whether is natural or reconstruction ISOILR_col FlagDataType.txt natural(0),reconstructed(1) soil profile @@ -22096,7 +22154,7 @@ RechrgDistNorthSubSurf_col SoilWaterDataType.txt - sclar for northern subsurface boundary water flux + scalar for northern subsurface boundary water flux @@ -22107,7 +22165,7 @@ RechrgDistEastSubSurf_col SoilWaterDataType.txt - sclar for eastern subsurface boundary water flux + scalar for eastern subsurface boundary water flux @@ -22118,7 +22176,7 @@ RechrgDistSouthSubSurf_col SoilWaterDataType.txt - sclar for southern subsurface boundary water flux + scalar for southern subsurface boundary water flux @@ -22129,7 +22187,7 @@ RechrgDistWestSubSurf_col SoilWaterDataType.txt - sclar for western subsurface boundary water flux + scalar for western subsurface boundary water flux @@ -22188,7 +22246,7 @@ RechargNorthSurf_col SoilWaterDataType.txt - sclar for northern surface boundary water flux + scalar for northern surface boundary water flux @@ -22199,7 +22257,7 @@ RechargEastSurf_col SoilWaterDataType.txt - sclar for eastern surface boundary water flux + scalar for eastern surface boundary water flux @@ -22210,7 +22268,7 @@ RechargSouthSurf_col SoilWaterDataType.txt - sclar for southern surface boundary water flux + scalar for southern surface boundary water flux @@ -22221,7 +22279,7 @@ RechargWestSurf_col SoilWaterDataType.txt - sclar for western surface boundary water flux + scalar for western surface boundary water flux @@ -22232,7 +22290,7 @@ RechargBottom_col SoilWaterDataType.txt - sclar for lower subsurface boundary water flux + scalar for lower subsurface boundary water flux @@ -22726,7 +22784,7 @@ EcosimBGCFluxType EcosimBGCFluxType.txt - ecosim biogeochemical flux type + biogeochemical flux type @@ -22781,7 +22839,7 @@ EcoSimSumDataType EcoSimSumDataType.txt - ecosim sum data type + sum data type @@ -22825,7 +22883,7 @@ LandSurfDataType LandSurfDataType.txt - land surf data type + land surface data type @@ -22913,7 +22971,7 @@ SurfLitterDataType SurfLitterDataType.txt - surf litter data type + surface litter data type @@ -22946,7 +23004,7 @@ EcoSimConst EcoSimConst.txt - ecosim constant + constant @@ -22968,7 +23026,7 @@ SurfSoilDataType SurfSoilDataType.txt - surf and soil data type + surface and soil data type diff --git a/src/ontology/bervo-edit.owl b/src/ontology/bervo-edit.owl index 3e7a5f5..1d0563c 100644 --- a/src/ontology/bervo-edit.owl +++ b/src/ontology/bervo-edit.owl @@ -14,7 +14,6 @@ Annotation(dcterms:description "None") Annotation(dcterms:license ) Annotation(dcterms:title "BERVO") -Declaration(Class()) Declaration(AnnotationProperty(dcterms:description)) Declaration(AnnotationProperty(dcterms:license)) Declaration(AnnotationProperty(dcterms:title)) @@ -36,13 +35,4 @@ AnnotationAssertion(rdfs:label dcterms:title "title") -############################ -# Classes -############################ - -# Class: (root node) - -AnnotationAssertion(rdfs:label "root node"@en) - - ) \ No newline at end of file diff --git a/src/ontology/components/bervo-src.owl b/src/ontology/components/bervo-src.owl index 0e6a126..ed188be 100644 --- a/src/ontology/components/bervo-src.owl +++ b/src/ontology/components/bervo-src.owl @@ -2355,6 +2355,7 @@ + Water associated with leaf biomass FDML GrosubPars.txt leaf water content, (g H2O g-1 C) @@ -2366,6 +2367,7 @@ + Leaf biomass water in bundle sheath cells FBS GrosubPars.txt leaf water content in bundle sheath, in C4 CO2 fixn @@ -2378,6 +2380,7 @@ + Leaf biomass water in mesophyll cells FMP GrosubPars.txt leaf water content in mesophyll in C4 CO2 fixn @@ -2390,6 +2393,7 @@ + Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of leaf. The NC or PC ratios are computed based on leaf stoichiometry. ZPLFM GrosubPars.txt min N:C,P:C in leaves relative to max values from PFT file @@ -2401,6 +2405,7 @@ + Ratio of the minimum NC or PC ratio with respect to the maximum NC or PC ratio of grains. The NC or PC ratios are computed based on leaf stoichiometry. ZPGRM GrosubPars.txt min N:C,P:C in grain relative to max values from PFT file @@ -2412,6 +2417,7 @@ + Fraction of stalk area that holds the xylem and phloem tubes for water and metabolite transport between plant organs FSTK GrosubPars.txt fraction of stalk area contributing to water,heat flow @@ -2423,6 +2429,7 @@ + Maxium allowed tube radius to do xylem and phloem transport, located at the out surface of stalk. ZSTX GrosubPars.txt maximum stalk inner radius for tranpsiration @@ -2435,6 +2442,7 @@ + Carbn-based stalk mass denisty used to copmute stalk volume StalkMassDensity GrosubPars.txt stalk density @@ -2447,6 +2455,7 @@ + Stalk volume per g carbon biomass SpecStalkVolume GrosubPars.txt specific volume (m3 gC-1) @@ -2458,6 +2467,7 @@ + It is a model-specific scaling parameter for computing biomass allocation to canopy foliage FRTX GrosubPars.txt Fraction used to calculate woody faction of stalk,root @@ -2469,6 +2479,7 @@ + Half saturation parameter for modeling carbon biomass flow during seed setting using the Michaelis-Menten kinetics SETC GrosubPars.txt Km for nonstructural C concn on seed set @@ -2481,6 +2492,7 @@ + Half saturation parameter for modeling nitrogen biomass flow during seed setting using the Michaelis-Menten kinetics SETN GrosubPars.txt Km for nonstructural N concn on seed set @@ -2493,6 +2505,7 @@ + Half saturation parameter for modeling phosphorus biomass flow during seed setting using the Michaelis-Menten kinetics SETP GrosubPars.txt Km for nonstructural P concn on seed set @@ -2505,6 +2518,7 @@ + An exponent parameter to compute leaf area expansion in the model SLA2 GrosubPars.txt parameter for calculating leaf area expansion @@ -2516,6 +2530,7 @@ + An exponent parameter to compute petiole length expansion in the model SSL2 GrosubPars.txt parameter for calculating petiole extension @@ -2527,6 +2542,7 @@ + an exponent parameter to compuate stalk volume expasion in the model SNL2 GrosubPars.txt parameter for calculating stalk extension @@ -2538,6 +2554,7 @@ + A stoichiometry ratio to compute the minimum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CNMX GrosubPars.txt maximum C:N ratio for nonstructural N transfer @@ -2549,6 +2566,7 @@ + A stoichiometry ratio to compute the minimum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CPMX GrosubPars.txt maximum C:P ratio for nonstructural P transfer @@ -2560,6 +2578,7 @@ + A stoichiometry ratio to compute the maximum nitrogen flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CNMN GrosubPars.txt minimum C:N ratio for nonstructural N transfer @@ -2571,6 +2590,7 @@ + A stoichiometry ratio to compute the maximum phosphorus flow associated with a transfer flux of nonstructual carbon between different storage pools of the plants. CPMN GrosubPars.txt minimum C:P ratio for nonstructural P transfer @@ -2582,6 +2602,7 @@ + It quantifies how much nitrogen can be fixed from N2 in the form NH3 when one mass unit of carbon is oxidized EN2F GrosubPars.txt N fixation yield from C oxidation @@ -2594,6 +2615,7 @@ + It quantifies how fast nitrogen fixing bacteria can oxidize its nonstructural biomass carbon to support its metabolism. VMXO GrosubPars.txt specific respiration rate by bacterial N2 fixers @@ -2606,6 +2628,7 @@ + The half saturation parameter when the effect of nodule C biomass on its maintenance is modeled using Michaelis-Menten kinetics SPNDLK GrosubPars.txt half saturation parameter for nodule maintenance respiration @@ -2618,6 +2641,7 @@ + It quantifies how fast the N-fixing bacteria lose activity when mortality is modeled using the linear kinetics. SPNDL GrosubPars.txt specific decomposition rate by bacterial N2 fixers @@ -2630,6 +2654,7 @@ + A model-specifc parameter to compute carbon, nitrogen and phosphorus exchange between nodule bacteria and their hosting plants. CCNGR GrosubPars.txt parameter to calculate nonstructural C,N,P exchange @@ -2641,6 +2666,7 @@ + Initial noduble carbon biomass C at the time of infection of the hosting plant. The infection is applied when noduble biomass of the hosting plant is zero. NodulBiomCAtInfection GrosubPars.txt initial bacterial mass at infection @@ -2653,6 +2679,7 @@ + Half saturation parameter for modeling bacterial use of nonstructural nitrogen using the Michaelis-Menten kinetics CZKM GrosubPars.txt Km for nonstructural Nuptake by bacteria @@ -2665,6 +2692,7 @@ + Half saturation parameter for modeling bacterial use of nonstructural phosphorus using the Michaelis-Menten kinetics CPKM GrosubPars.txt Km for nonstructural P uptake by bacteria @@ -2677,6 +2705,7 @@ + Minimum fraction of root C can be recyled during root death RCCZR GrosubPars.txt minimum fractions for root C recycling @@ -2688,6 +2717,7 @@ + Maximum fraction of root C can be recyled during root death RCCYR GrosubPars.txt maximum fractions for root C recycling @@ -2699,6 +2729,7 @@ + Maximum fraction of root nitrogen can be recyled during root death RCCXR GrosubPars.txt maximum fractions for root N recycling @@ -2710,6 +2741,7 @@ + Maximum fraction of root phosphorus can be recyled during root death RCCQR GrosubPars.txt maximum fractions for root P recycling @@ -2721,6 +2753,7 @@ + Minimum fraction of nodule bacteria C can be recyled during root death RCCZN GrosubPars.txt minimum fractions for bacteria C recycling @@ -2732,6 +2765,7 @@ + Maximum fraction of nodule bacteria C can be recyled during root death RCCYN GrosubPars.txt maximum fractions for bacteria C recycling @@ -2743,6 +2777,7 @@ + Maximum fraction of nodule bacteria nitrogen can be recyled during root death RCCXN GrosubPars.txt maximum fractions for bacteria N recycling @@ -2754,6 +2789,7 @@ + Maximum fraction of nodule bacteria phosphorus can be recyled during root death RCCQN GrosubPars.txt maximum fractions for bacteria P recycling @@ -2765,6 +2801,7 @@ + Number of hours need to accumulate to trigger litterfall after leaf maturity HoursReq4LiterfalAftMature GrosubPars.txt required hours after physl maturity until start of LitrFall @@ -2777,6 +2814,7 @@ + Rate parameter to compute the gradient driven carbon and nutrient exchange between seasonal storage and nonstructural pools FRSV GrosubPars.txt rate constant for remobiln of storage chemical element during leafout @@ -2789,6 +2827,7 @@ + Rate parameter to compute the gradient driven carbon exchange between stalk and leaf reserve pools FXFY GrosubPars.txt rate constant for leaf-reserve nonstructural C exchange @@ -2801,6 +2840,7 @@ + Rate parameter to compute the gradient driven nitrogen and phosphorus exchange between stalk and leaf reserve pools FXFZ GrosubPars.txt rate constant for leaf-reserve nonstructural N,P exchange @@ -2813,6 +2853,7 @@ + Rate parameter for gradient-driven nonstructural carbon and nutrient exchange between shoot and seasonal storage pools RateK4ShootSeaStoreNonstEXfer GrosubPars.txt rate constant for leaf-storage nonstructural chemical element exchange @@ -2825,6 +2866,7 @@ + Rate parameter for gradient driven nonstructural carbon and nutrient exchange between root and seasonal storage pools RateK4RootSeaStorNonstEXfer GrosubPars.txt rate constant for root-storage nonstructural chemical element exchange @@ -2837,6 +2879,7 @@ + Fraction of mobilized seasonal storage allocated to roots upon leaf out FXRT GrosubPars.txt root partitioning of storage C during leafout @@ -2848,6 +2891,7 @@ + Fraction of mobilized seasonal storage allocated to shoots upon leaf out FXSH GrosubPars.txt shoot partitioning of storage C during leafout @@ -2859,6 +2903,7 @@ + Rate constant for modeling nonstructural C,N and P exchange between hosting plants and nodule bacteria FXRN GrosubPars.txt rate constant for plant-bacteria nonstructl C,N,P exchange @@ -2871,6 +2916,7 @@ + This parameters specifies the maximum fraction of nitrogen can be recycled upon senescence of plant canopy organs RCCX GrosubPars.txt maximum fractions for shoot N recycling @@ -2882,6 +2928,7 @@ + This parameters specifies the maximum fraction of phosphorus can be recycled upon senescence of plant canopy organs RCCQ GrosubPars.txt maximum fractions for shoot P recycling @@ -2893,6 +2940,7 @@ + This parameters specifies the minimum fraction of carbon can be recycled upon senescence of plant canopy organs RCCZ GrosubPars.txt minimum fractions for shoot C recycling @@ -2904,6 +2952,7 @@ + This parameters specifies the maximum fraction of carbon can be recycled upon senescence of plant canopy organs RCCY GrosubPars.txt maximum fractions for shoot C recycling @@ -2915,6 +2964,7 @@ + This parameters specifies the number of hours required for plant to initiate senescence after maturity Hours4SenesAftMature GrosubPars.txt number of hours after physiol maturity required for senescence @@ -2927,6 +2977,7 @@ + This parameters specifies the number of hours required for plant to initiate storage carbon remobilization after leafout HourReq2InitSStor4LeafOut GrosubPars.txt number of hours required to initiate remobilization of storage C for leafout @@ -2939,6 +2990,7 @@ + This parameters specifies how much seasonal storage C is oxidized to support canopy and root development GVMX GrosubPars.txt specific oxidation rate of nonstructural C during leafout at 25 C @@ -2951,6 +3003,7 @@ + This parameter scales the relative sink strength for non-structural carbon and nutrient for growing primary and secondary roots RTSK GrosubPars.txt relative primary root sink strength 0.25=shallow,4.0=deep root profile @@ -2962,6 +3015,7 @@ + This parameter is obsolete, and was EcoSIM specific. ICLM FlagDataType.txt changes to weather data (0=none,1=step,2=transient) @@ -2973,6 +3027,7 @@ + This parameter is obsolete, and was EcoSIM specific. IMNG FlagDataType.txt flag for land management @@ -2984,6 +3039,7 @@ + This EcoSIM specific flag parameter is used for internal forcing data processing IWTHR FlagDataType.txt weather data type:1=daily,2=hourly for first(L=1) or second(L=2) scene @@ -2995,6 +3051,7 @@ + This specifies what kind of fertilizer is applied in the model, which could be mineral fertilizer, plant residue, or animal maure. IYTYP FlagDataType.txt fertilizer release type from fertilizer input file @@ -3006,6 +3063,7 @@ + This EcoSIM flag parameters specifies what type of disturbances are applied to soil, including tillage, fire, litter removal or drainge. iSoilDisturbType_col FlagDataType.txt soil disturbance type @@ -3017,6 +3075,7 @@ + The Köppen climate zone refers to a region defined by the Köppen climate classification system. KoppenClimZone_col FlagDataType.txt Koppen climate zone @@ -3028,6 +3087,7 @@ + This EcoSIM parameter species how irrigation is triggered, which could be based on soil moisture content or canopy water potential IFLGV_col FlagDataType.txt flag for irrigation criterion,0=SWC,1=canopy water potential @@ -3039,6 +3099,7 @@ + This EcoSIM parameter species whether to reset soil profile after some triggering events, like erosion or tillage. iResetSoilProf_col FlagDataType.txt disturbance flag @@ -3050,6 +3111,7 @@ + This flag indicates wheter NH4 is applied with broadcast. IFNHB_col FlagDataType.txt banded NH4 fertilizer flag @@ -3061,6 +3123,7 @@ + This flag indicates wheter NO3 is applied with broadcast. IFNOB_col FlagDataType.txt banded NO3 fertilizer flag @@ -3072,6 +3135,7 @@ + This flag indicates whether H2PO4 is applied with broadcast IFPOB_col FlagDataType.txt banded H2PO4 fertilizer flag @@ -3083,6 +3147,7 @@ + This indicates whether the model has input soil properties or has to compute based on soil texture and soil organic matter. ISOIL_vr FlagDataType.txt flag for calculating FC(1),WP(2),SCNV(3),SCNH(4) @@ -3094,6 +3159,7 @@ + This indicates the soil input type, whether is natural or reconstruction ISOILR_col FlagDataType.txt natural(0),reconstructed(1) soil profile @@ -22072,7 +22138,7 @@ RechrgDistNorthSubSurf_col SoilWaterDataType.txt - sclar for northern subsurface boundary water flux + scalar for northern subsurface boundary water flux @@ -22083,7 +22149,7 @@ RechrgDistEastSubSurf_col SoilWaterDataType.txt - sclar for eastern subsurface boundary water flux + scalar for eastern subsurface boundary water flux @@ -22094,7 +22160,7 @@ RechrgDistSouthSubSurf_col SoilWaterDataType.txt - sclar for southern subsurface boundary water flux + scalar for southern subsurface boundary water flux @@ -22105,7 +22171,7 @@ RechrgDistWestSubSurf_col SoilWaterDataType.txt - sclar for western subsurface boundary water flux + scalar for western subsurface boundary water flux @@ -22164,7 +22230,7 @@ RechargNorthSurf_col SoilWaterDataType.txt - sclar for northern surface boundary water flux + scalar for northern surface boundary water flux @@ -22175,7 +22241,7 @@ RechargEastSurf_col SoilWaterDataType.txt - sclar for eastern surface boundary water flux + scalar for eastern surface boundary water flux @@ -22186,7 +22252,7 @@ RechargSouthSurf_col SoilWaterDataType.txt - sclar for southern surface boundary water flux + scalar for southern surface boundary water flux @@ -22197,7 +22263,7 @@ RechargWestSurf_col SoilWaterDataType.txt - sclar for western surface boundary water flux + scalar for western surface boundary water flux @@ -22208,7 +22274,7 @@ RechargBottom_col SoilWaterDataType.txt - sclar for lower subsurface boundary water flux + scalar for lower subsurface boundary water flux @@ -22702,7 +22768,7 @@ EcosimBGCFluxType EcosimBGCFluxType.txt - ecosim biogeochemical flux type + biogeochemical flux type @@ -22757,7 +22823,7 @@ EcoSimSumDataType EcoSimSumDataType.txt - ecosim sum data type + sum data type @@ -22801,7 +22867,7 @@ LandSurfDataType LandSurfDataType.txt - land surf data type + land surface data type @@ -22889,7 +22955,7 @@ SurfLitterDataType SurfLitterDataType.txt - surf litter data type + surface litter data type @@ -22922,7 +22988,7 @@ EcoSimConst EcoSimConst.txt - ecosim constant + constant @@ -22944,7 +23010,7 @@ SurfSoilDataType SurfSoilDataType.txt - surf and soil data type + surface and soil data type