Skip to content

Latest commit

 

History

History
36 lines (23 loc) · 1.41 KB

CHANGELOG.md

File metadata and controls

36 lines (23 loc) · 1.41 KB
Raw

Change Log

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased

Changed

  • Improvements to loading profile and database objects (!9)
  • Database search is now restricted based on species inferred from markers in the query profile, not by user-specified species (!8)
  • Summary report is displayed in terminal, full report to a CSV file (!11, !12)

Fixed

  • Added names of additional valid markers present in ForenSeq but not in Cellosaurus; includes four autosomal, seven X chromosome, and 21 Y chromosome STR markers (!8)
  • Rank order of results with the same score but different numbers of shared alleles (!10)

[0.0.2] 2023-05-25

Fixed

  • Divide by zero bug when query and reference have no shared alleles (!6)
  • Marker name validation and standardization for human, mouse, and dog (!6)
  • Rank order of results with the same score but different numbers of shared alleles (!6)
  • Handling of string alleles, e.g. X and Y for Amelogenin (!7)
  • Smart natural (not lexicographical) sorting of alleles for display (!7)

[0.0.1] 2023-05-22

Initial release! Includes:

  • claspy_db for downloading and formatting the Cellosaurus database
  • claspy for searching a profile against Cellosaurus and reporting the best results