Search results

Sphinx Gallery Integration in DIPY

bhg:bloomington_usa_1Bloomington eventBloomington event

programming:documentationMarkdown, SphinxMarkdown, Sphinx

project

project_type:documentation

Status: Open.

#205 In brainhackorg/global2021;

· Remi-Gau opened on Dec 2, 2022

archivotron: a python suite for naming and organizing data

bhg:washingtondc_usa_1BHG 2021 Washington DC eventBHG 2021 Washington DC event

git_skills:2_branches_PRs

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:1_basic structure

project_type:data_managementinvolves programminginvolves programming

project_type:documentation

status:web_ready

tools:BIDS

Status: Open.

#189 In brainhackorg/global2021;

· jbteves opened on Dec 9, 2021

Brainfeed: a tool for domain experts to find recent and relevant public discourse on topics they are familiar with

bhg:toronto_can_1BHG 2021 Toronto eventBHG 2021 Toronto event

git_skills:0_none

git_skills:1_commit_push

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:html_css

programming:Python

project

project_development_status:1_basic structure

project_tools_skills:expert

project_tools_skills:familiar

project_type:data_managementinvolves programminginvolves programming

project_type:documentation

status:web_ready

Status: Open.

#185 In brainhackorg/global2021;

· yohanyee opened on Dec 9, 2021

NiiVue: minimal, modular, fast WebGL visualization

bhg:washingtondc_usa_1BHG 2021 Washington DC eventBHG 2021 Washington DC event

git_skills:0_none

git_skills:1_commit_push

modality:DWI

modality:fMRI

modality:MRI

modality:PET

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:JavaJavaJava

programming:JavascriptJavascriptJavascript

programming:Python

project

project_development_status:2_releases_existing

project_type:documentation

project_type:visualisation

status:web_ready

tools:AFNI

tools:Freesurfer

tools:FSL

tools:SPM

Status: Open.

#183 In brainhackorg/global2021;

· neurolabusc opened on Dec 8, 2021

EEG Cross Frequency Coupling, Consciousness Biomarker

bhg:washingtondc_usa_1BHG 2021 Washington DC eventBHG 2021 Washington DC event

git_skills:1_commit_push

modality:EEG

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Matlab

programming:Python

project

project_development_status:0_concept_no_content

project_tools_skills:expert

project_tools_skills:familiar

project_type:coding_methods

project_type:documentation

project_type:method_development

project_type:pipeline_development

tools:Jupyter

tools:MNE

topic:physiology

topic:systems_neuroscience

Status: Open.

#182 In brainhackorg/global2021;

· barlehmann opened on Dec 8, 2021

Niviz: Configurable quality control image generation and rating

bhg:toronto_can_1BHG 2021 Toronto eventBHG 2021 Toronto event

git_skills:1_commit_push

git_skills:2_branches_PRs

modality:DWI

modality:fMRI

modality:MRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:html_css

programming:JavaJavaJava

programming:JavascriptJavascriptJavascript

programming:Python

project

project_development_status:1_basic structure

project_type:coding_methods

project_type:documentation

project_type:visualisation

status:web_ready

tools:BIDS

tools:fMRIPrep

tools:Nipype

Status: Open.

#181 In brainhackorg/global2021;

· jerdra opened on Dec 7, 2021

Using Explainable Artificial Intelligence (XAI) to create a real-time closed-loop stimulation

bhg:toronto_can_1BHG 2021 Toronto eventBHG 2021 Toronto event

git_skills:0_none

modality:behavioral

modality:EEG

modality:fMRI

modality:MRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:0_concept_no_content

project_type:documentation

project_type:pipeline_development

project_type:visualisation

status:web_ready

topic:data_visualisation

Status: Open.

#180 In brainhackorg/global2021;

· HussainAther opened on Dec 7, 2021

Nobrainer and Nobrainer-Zoo: A 3D Deep Learning based Image Analysis Framework and model repository

bhg:boston_usa_1BHG 2021 Boston eventBHG 2021 Boston event

git_skills:1_commit_push

modality:MRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:html_css

programming:Python

project

project_development_status:1_basic structure

project_type:coding_methods

project_type:data_managementinvolves programminginvolves programming

project_type:documentation

project_type:tutorial_recording

project_type:visualisation

status:web_ready

tools:Datalad

topic:data_visualisation

topic:deep_learning

topic:diversity_inclusivity_equality

topic:MR_methodologies

Status: Open.

#179 In brainhackorg/global2021;

· Aakanksha-Rana opened on Dec 6, 2021

Benchmark denoising strategies on fMRIPrep processed outputs

bhg:mtl_can_1BHG 2021 Montreal eventBHG 2021 Montreal event

git_skills:2_branches_PRs

modality:fMRI

modality:MRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:1_basic structure

project_type:coding_methods

project_type:documentation

project_type:pipeline_development

project_type:visualisation

status:published

status:web_ready

tools:BIDS

tools:fMRIPrep

tools:Jupyter

topic:connectome

topic:data_visualisation

Status: Open.

#176 In brainhackorg/global2021;

· htwangtw opened on Dec 6, 2021

Fast Tractography Streamline Search

bhg:mtl_can_1BHG 2021 Montreal eventBHG 2021 Montreal event

git_skills:1_commit_push

modality:DWI

programming:C++

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:0_concept_no_content

project_type:documentation

project_type:method_development

status:published

status:web_ready

tools:DIPY

topic:connectome

topic:diffusion

topic:tractography

Status: Open.

#173 In brainhackorg/global2021;

· StongeEtienne opened on Dec 5, 2021

Continuous testing of neuroimaging results across pipelines and datasets

bhg:mtl_can_1BHG 2021 Montreal eventBHG 2021 Montreal event

git_skills:2_branches_PRs

programming:containerizationDocker, SingularityDocker, Singularity

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:1_basic structure

project_tools_skills:familiar

project_type:coding_methods

project_type:documentation

status:published

status:web_ready

tools:AFNI

tools:ANTs

tools:Datalad

tools:Freesurfer

tools:FSL

tools:SPM

topic:reproducible_scientific_methods

Status: Open.

#172 In brainhackorg/global2021;

· jacobsanz97 opened on Dec 5, 2021

Tools for MRI diffusion in human and non-human primates

bhg:marseille_fra_1BHG 2021 Marseille eventBHG 2021 Marseille event

git_skills:0_none

git_skills:1_commit_push

modality:DWI

modality:MRI

programming:containerizationDocker, SingularityDocker, Singularity

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

programming:shell_scripting

programming:Unix_command_line

project

project_development_status:0_concept_no_content

project_tools_skills:expert

project_type:coding_methods

project_type:documentation

project_type:pipeline_development

project_type:visualisation

status:published

status:web_ready

tools:DIPY

Status: Open.

#169 In brainhackorg/global2021;

· julfou81 opened on Dec 2, 2021