From e554f82303d361f04b0b29a084062be04ddeeb75 Mon Sep 17 00:00:00 2001 From: stephanbreimann Date: Thu, 21 Sep 2023 21:16:03 +0200 Subject: [PATCH] Remove .ipynb checkpoint --- .../tutorial2_data_loader-checkpoint.ipynb | 99 ------------------- 1 file changed, 99 deletions(-) delete mode 100644 tutorials/.ipynb_checkpoints/tutorial2_data_loader-checkpoint.ipynb diff --git a/tutorials/.ipynb_checkpoints/tutorial2_data_loader-checkpoint.ipynb b/tutorials/.ipynb_checkpoints/tutorial2_data_loader-checkpoint.ipynb deleted file mode 100644 index d5afa63d..00000000 --- a/tutorials/.ipynb_checkpoints/tutorial2_data_loader-checkpoint.ipynb +++ /dev/null @@ -1,99 +0,0 @@ -{ - "cells": [ - { - "cell_type": "markdown", - "source": [ - "# Data loading\n", - "\n", - "An overview of the benchmark datasets are provided by default:" - ], - "metadata": { - "collapsed": false, - "pycharm": { - "name": "#%% md\n" - } - } - }, - { - "cell_type": "code", - "execution_count": null, - "outputs": [], - "source": [ - "print(\"hallo\")\n", - "import aaanalysis as aa\n", - "df_info = aa.load_dataset()\n", - "print(df_info)" - ], - "metadata": { - "collapsed": false, - "pycharm": { - "name": "#%%\n", - "is_executing": true - } - } - }, - { - "cell_type": "markdown", - "source": [ - "Benchmark datasets are categorized into amino acid ('AA'), domain ('DOM'), and sequence ('SEQ') level datasets, indicated name suffix." - ], - "metadata": { - "collapsed": false, - "pycharm": { - "name": "#%% md\n" - } - } - }, - { - "cell_type": "code", - "execution_count": null, - "outputs": [], - "source": [ - "df_seq1 = aa.load_dataset(name=\"AA_FURIN\")\n", - "df_seq2 = aa.load_dataset(name=\"SEQ_AMYLO\")\n", - "df_seq3 = aa.load_dataset(name=\"DOM_GSEC\")" - ], - "metadata": { - "collapsed": false, - "pycharm": { - "name": "#%%\n" - } - } - }, - { - "cell_type": "markdown", - "source": [ - "For some datasets, an additional version of it is provided\n", - "for positive-unlabeled (PU) learning containing only positive (1) and unlabeled (2) data samples, as indicated by\n", - "*dataset_name_PU* (e.g., 'DOM_GSEC_PU').\n" - ], - "metadata": { - "collapsed": false, - "pycharm": { - "name": "#%% md\n" - } - } - } - ], - "metadata": { - "kernelspec": { - "display_name": "Python 3", - "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 2 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython2", - "version": "2.7.6" - } - }, - "nbformat": 4, - "nbformat_minor": 0 -} \ No newline at end of file