From 3780a5cad31c1903a8ba113d0ad7a14b3dbe97d6 Mon Sep 17 00:00:00 2001 From: "C. Brenhin Keller" Date: Mon, 15 Jul 2024 21:33:17 -0400 Subject: [PATCH] Update initial proposal ll in hiatus case --- Project.toml | 2 +- src/StratMetropolis.jl | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/Project.toml b/Project.toml index a72495c..6a79d7b 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "Chron" uuid = "68885b1f-77b5-52a7-b2e7-6a8014c56b98" authors = ["C. Brenhin Keller "] -version = "0.6.2" +version = "0.6.3" [deps] DelimitedFiles = "8bb1440f-4735-579b-a4ab-409b98df4dab" diff --git a/src/StratMetropolis.jl b/src/StratMetropolis.jl index 3c2bec3..e670ce2 100644 --- a/src/StratMetropolis.jl +++ b/src/StratMetropolis.jl @@ -783,8 +783,8 @@ end # Add log likelihood for hiatus duration - duration = @. min(model_ages[closest_hiatus_unique - 1] - model_ages[closest_hiatus_unique], Hiatus_duration) - ll += normpdf_ll(Hiatus_duration, Hiatus_duration_sigma, duration) + duration = @. model_ages[closest_hiatus_unique - 1] - model_ages[closest_hiatus_unique] + ll += normcdf_ll(Hiatus_duration, Hiatus_duration_sigma, duration) # Preallocate variables for MCMC proposals llₚ=ll