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Additional Dependency updates Build and Test GATK 4 #4785: Pull request #9006 synchronize by lbergelson
October 21, 2024 21:57 50m 47s lb_security_fix
lb_security_fix
October 21, 2024 21:57 50m 47s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4784: Pull request #9015 synchronize by gbggrant
October 21, 2024 19:19 1h 15m 15s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:19 1h 15m 15s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4783: Pull request #9015 synchronize by gbggrant
October 21, 2024 19:15 1h 19m 25s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:15 1h 19m 25s
VS-1476. Removing All usage of VQSR from VDS creation. Build and Test GATK 4 #4782: Pull request #9015 opened by gbggrant
October 21, 2024 19:11 1h 15m 59s gg_VS-1476_RemoveVQSRFromVDS
gg_VS-1476_RemoveVQSRFromVDS
October 21, 2024 19:11 1h 15m 59s
VS-1506 - Pull changes from EchoCallset into ah_var_store branch Build and Test GATK 4 #4781: Pull request #8993 synchronize by gbggrant
October 19, 2024 01:56 1h 13m 20s gg_VS-1288_PullEchoCallsetChangesIntoAhVarStore
gg_VS-1288_PullEchoCallsetChangesIntoAhVarStore
October 19, 2024 01:56 1h 13m 20s
Create tools for SV VCF cleaning Build and Test GATK 4 #4780: Pull request #8996 synchronize by kjaisingh
October 18, 2024 22:07 51m 40s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 22:07 51m 40s
Create tools for SV VCF cleaning Build and Test GATK 4 #4779: Pull request #8996 synchronize by kjaisingh
October 18, 2024 22:07 50m 47s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 22:07 50m 47s
Additional Dependency updates Build and Test GATK 4 #4778: Pull request #9006 synchronize by lbergelson
October 18, 2024 20:16 53m 29s lb_security_fix
lb_security_fix
October 18, 2024 20:16 53m 29s
Mark NVScoreVariants as a beta feature (#9010) Build and Test GATK 4 #4777: Commit b409f77 pushed by droazen
October 18, 2024 20:13 51m 30s master
master
October 18, 2024 20:13 51m 30s
Added a '--prefer-mane-transcripts' mode that enforces MANE_Select tagged Gencode transcripts where possible Build and Test GATK 4 #4776: Pull request #9012 opened by jamesemery
October 18, 2024 19:34 52m 6s je_ManeTranscriptModeFunctotator
je_ManeTranscriptModeFunctotator
October 18, 2024 19:34 52m 6s
Remove CNNScoreVariants, CNNVariantTrain, and CNNVariantWriteTensors … Build and Test GATK 4 #4775: Commit d6acb84 pushed by droazen
October 18, 2024 18:56 55m 45s master
master
October 18, 2024 18:56 55m 45s
Additional Dependency updates Build and Test GATK 4 #4774: Pull request #9006 synchronize by lbergelson
October 18, 2024 18:31 53m 2s lb_security_fix
lb_security_fix
October 18, 2024 18:31 53m 2s
Mark NVScoreVariants as a beta feature Build and Test GATK 4 #4773: Pull request #9010 opened by droazen
October 18, 2024 18:29 25m 55s dr_nvscorevariants_to_beta
dr_nvscorevariants_to_beta
October 18, 2024 18:29 25m 55s
Additional Dependency updates Build and Test GATK 4 #4772: Pull request #9006 synchronize by lbergelson
October 18, 2024 18:07 52m 35s lb_security_fix
lb_security_fix
October 18, 2024 18:07 52m 35s
Update gradle and build.gradle (#8998) Build and Test GATK 4 #4771: Commit df8e4b7 pushed by lbergelson
October 18, 2024 17:56 51m 24s master
master
October 18, 2024 17:56 51m 24s
Added a check for whether files can be created and executed within th… Build and Test GATK 4 #4770: Commit c18f3e2 pushed by KevinCLydon
October 18, 2024 17:50 53m 19s master
master
October 18, 2024 17:50 53m 19s
Remove CNNScoreVariants, CNNVariantTrain, and CNNVariantWriteTensors Build and Test GATK 4 #4769: Pull request #9009 opened by droazen
October 18, 2024 17:33 52m 55s dr_remove_cnn_tools
dr_remove_cnn_tools
October 18, 2024 17:33 52m 55s
Create tools for SV VCF cleaning Build and Test GATK 4 #4768: Pull request #8996 synchronize by kjaisingh
October 18, 2024 16:55 52m 37s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 16:55 52m 37s
Create tools for SV VCF cleaning Build and Test GATK 4 #4767: Pull request #8996 synchronize by kjaisingh
October 18, 2024 16:43 52m 27s kj_sv_cleanvcf
kj_sv_cleanvcf
October 18, 2024 16:43 52m 27s
Update gradle and build.gradle Build and Test GATK 4 #4766: Pull request #8998 synchronize by lbergelson
October 18, 2024 16:03 52m 50s lb_gradle_updates
lb_gradle_updates
October 18, 2024 16:03 52m 50s
Added a check for whether files can be created and executed within the configured tmp-dir Build and Test GATK 4 #4765: Pull request #8951 synchronize by KevinCLydon
October 18, 2024 16:00 54m 13s kl_noexec_tmp_warning_8453
kl_noexec_tmp_warning_8453
October 18, 2024 16:00 54m 13s
Update docker base (#9005) Build and Test GATK 4 #4764: Commit 07eac31 pushed by lbergelson
October 18, 2024 15:45 53m 6s master
master
October 18, 2024 15:45 53m 6s
Adding small warning messages to not to feed any GVCF files to these … Build and Test GATK 4 #4763: Commit f5a2256 pushed by gokalpcelik
October 18, 2024 14:23 52m 17s master
master
October 18, 2024 14:23 52m 17s
Adding small warning messages to not to feed any GVCF files to these tools Build and Test GATK 4 #4762: Pull request #9008 synchronize by gokalpcelik
October 18, 2024 14:23 52m 31s gc_add_noGVCF_as_input_warnings_to_docs
gc_add_noGVCF_as_input_warnings_to_docs
October 18, 2024 14:23 52m 31s
Adding small warning messages to not to feed any GVCF files to these tools Build and Test GATK 4 #4761: Pull request #9008 synchronize by gokalpcelik
October 18, 2024 14:23 53m 1s gc_add_noGVCF_as_input_warnings_to_docs
gc_add_noGVCF_as_input_warnings_to_docs
October 18, 2024 14:23 53m 1s