Multiome_develop

5.9.1

2024-11-12 (Date of Last Commit)

• Renamed the ATAC workflow library metric percent_target to atac_percent_target for compatibility with downstream tools
• Added more disk and memory to the JoinBarcodes task

MultiSampleSmartSeq2SingleNucleus_develop

2.0.4

2024-11-12 (Date of Last Commit)

• Added memory and disk updates to Multiome JoinBarcodes; this does not impact the snSS2 workflow

ImputationBeagle_development_v0.0.1

add array imputation quota consumed wdl (#1425)

* add array imputation quota consumed wdl

* add changelogs for imputation array related workflows

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Co-authored-by: Jose Soto <jsoto@broadinstitute.org>

atac_v2.5.0

2.5.0

2024-10-23 (Date of Last Commit)

• Updated the tabix flag in CreateFragmentFile task to use CSI instead of TBI indexing, which supports chromosomes larger than 512 Mbp

WholeGenomeReprocessing_v3.3.3

3.3.3

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0

WholeGenomeGermlineSingleSample_v3.3.3

3.3.3

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0

VariantCalling_v2.2.4

2.2.4

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0

ValidateChip_v1.16.7

1.16.7

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0

UltimaGenomicsWholeGenomeGermline_v1.1.2

1.1.2

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0

UltimaGenomicsWholeGenomeCramOnly_v1.0.23

1.0.23

2024-11-04 (Date of Last Commit)

• Updated to GATK version 4.6.1.0