Skip to content

Releases: broadinstitute/wfl

v0.6.1

13 Apr 14:54
@github-actions github-actions
v0.6.1
75dd604
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.
Compare
Choose a tag to compare
v0.6.1

Docs available at broadinstitute.github.io/wfl/v0.6.1

Changes:

  • [GH-1277] Prevent update loop from terminating (#364)
  • [GH-1284] Fix docker image generation (#363)
Assets 2
Loading

v0.6.0 Release (#359)

13 Apr 16:15
@ehigham ehigham
v0.6.0
3d75261
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.
Compare
Choose a tag to compare
v0.6.0 Release (#359)

Docs available at broadinstitute.github.io/wfl/v0.6.0

Changes:

  • GH-1282: Document WFL's support for Somatic Genomes. (#361)
  • GitHub develop infrastructure + release changes (#356)
  • GH-1188: Bump GDCWholeGenomeSomaticSingleSample Version When Lantern Release (#351)
  • [GH-1278] Fix SG update-workload! implementation from updating Clio multiple times (#358)
  • [GH-1221] import snapshots into a workspace (#347)
  • Bump pyyaml from 5.3.1 to 5.4 in /ops (#350)
  • Fix CLIpy. (#349)
  • Ra gh1254 cli changes (#346)
  • [GH-1214] Create TDR Snapshots (#338)
  • Ra gh1254 cli changes (#345)
  • [GH-1244] Lightweight Testing Dataset(s) (#342)
  • Changing cli.py to reflect deployment from helmfile rather than helm (#344)
  • Bump elliptic from 6.5.3 to 6.5.4 in /ui (#343)
  • [GH-1225] POST /api/v1/stop (#337)
  • [GH-1203]: fix reading from vault at load-time (#336)
  • [GH-1172] Start System Test for sarscov2_illumina_all Automation (#334)
  • GH-1191: Plumb WFL_CLIO_URL for production. (#335)
  • [GH-1196] Try to run production data through Somatic Genomes pipeline. (#327)
  • Add workaround for GH-1212. (#333)
  • [GH-1172] Add inputs.edn for sarscov2_illumina_full (#332)
  • [GH-1172] Bulk Ingest Workflow Outputs (#331)
  • Use firecloud api defined by WFL_FIRECLOUD_URL (#329)
  • [GH-1200] Double submit hot-fix 0.5.2 changes. (#330)
  • [GH-1205] TDR schemas for sarscov2_illumina_full pipeline (#328)
  • GH-1163: Support Somatic Genomes in production. (#324)
  • [GH-1181] Add Dispatch for "Object" Type (#325)
  • [GH-1155] Add a BigQuery module for BQ and Terra interactions (#320)
  • [GH-1181] Ingest Workflow Outputs into TDR (#321)
  • [GH-1197] Fix default inputs and options and update documentation about configurations. (#317)
  • Updating AppVersion to the latest tag (0.5.1) (#323)
  • GH-1178: Improve SG tests. (#318)
  • partition by datarepo_ingest_data in assemble_refbased schema (#322)
  • [GH-1176] assemble_refbased workflow outputs schema (#316)
  • fix [GH-1182] by reordering when the Pub/Sub subscription is (#319)
  • [GH-1130] Miscellaneous WFL configuration and build clean up. Remove envs. (#310)
  • Update the environments commit. For the last time? (#315)
  • [GH-1153] Google Cloud Pub/Sub Support for Cloud Storage Notifications (#312)
  • GH-1091: Track Somatic Genomes output in Clio. (#307)
  • [Snack] Fix some bugs and warnings on the frontend (#311)
  • Add docs for GPArrays module (#309)
  • [GH-1145] [AppSec] Add AppSec Github Trivy Action (#308)
  • [Snack] Version the docs (#301)
  • [GH-1144] Helper script for importing Data Repo data into Terra (#306)
  • Move everything around, add abort.sh docs (#302)
  • [GH-1142] Make aou cleanup script backwards compatible (#303)
Assets 2
Loading