diff --git a/MANIFEST.in b/MANIFEST.in
index 37a10f5c3..4981a8681 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -8,15 +8,16 @@ recursive-include doc *.rst
 include doc/conf.py
 include doc/make.bat
 include doc/Makefile
-include doc/example/modes_S11.h5
-include doc/example/S11_config_preprocessing.yml
-include doc/example/S11_config_postprocessing.yml
-include doc/example/alien_removal.PNG
-include doc/example/hotpixel_removal.PNG
+include bcdi/examples/S11_modes.h5
+include bcdi/examples/config_preprocessing.yml
+include bcdi/examples/config_postprocessing.yml
+include bcdi/examples/S11_config_preprocessing.yml
+include bcdi/examples/S11_config_postprocessing.yml
 include bcdi/preprocessing/alias_dict_2018.txt
 include bcdi/preprocessing/alias_dict_2019.txt
 include bcdi/preprocessing/alias_dict_2020.txt
 include bcdi/preprocessing/alias_dict_2021.txt
 include tests/postprocessing/3572_fa.vtk
-include conf/config_preprocessing.yml
-include conf/config_postprocessing.yml
\ No newline at end of file
+include doc/example/alien_removal.PNG
+include doc/example/hotpixel_removal.PNG
+include doc/example/files_preprocessing.PNG
\ No newline at end of file
diff --git a/bcdi/__init__.py b/bcdi/__init__.py
index cc0b7bd64..47abfcf0c 100644
--- a/bcdi/__init__.py
+++ b/bcdi/__init__.py
@@ -6,4 +6,4 @@
 #       authors:
 #         Jerome Carnis, carnis_jerome@yahoo.fr
 """The main bcdi package, which contains the whole framework."""
-__version__ = "0.2.1"
+__version__ = "0.2.2"
diff --git a/doc/example/S11_config_postprocessing.yml b/bcdi/examples/S11_config_postprocessing.yml
similarity index 93%
rename from doc/example/S11_config_postprocessing.yml
rename to bcdi/examples/S11_config_postprocessing.yml
index 999b8b6e3..14506975b 100644
--- a/doc/example/S11_config_postprocessing.yml
+++ b/bcdi/examples/S11_config_postprocessing.yml
@@ -5,16 +5,16 @@ save_dir: "C:/Users/Jerome/Documents/data/CXIDB-I182/CH4760/test/"
 # images will be saved here,
 # leave it to None otherwise (default to data directory's parent)
 data_dir: "C:/Users/Jerome/Documents/data/CXIDB-I182/CH4760/S11/"
-# leave None to use the beamline default, or provide the full path to the output of the
-# phase retrieval.
+# leave None to use the beamline default, or provide the full path to the data.
 sample_name: "S"
 # string in front of the scan number in the folder name.
 comment: ""  # comment in filenames, should start with _
-#########################################################
-# parameters used when averaging several reconstruction #
-#########################################################
+##########################################################
+# parameters used when averaging several reconstructions #
+##########################################################
 sort_method: "variance/mean"
 # 'mean_amplitude' or 'variance' or 'variance/mean' or 'volume', metric for averaging
+averaging_space: "reciprocal_space"  # 'direct_space' or 'reciprocal_space'
 correlation_threshold: 0.90
 ###################################
 # parameters related to centering #
@@ -72,6 +72,7 @@ strain_method: "default"  # 'default' or 'defect'.
 beamline: "ID01"  # name of the beamline, used for data loading and normalization
 # by monitor and orthogonalisation
 # supported beamlines: 'ID01', 'SIXS_2018', 'SIXS_2019', 'CRISTAL', 'P10', '34ID'
+is_series: True  # specific to series measurement at P10
 actuators: None
 # Optional dictionary that can be used to define the entries
 # corresponding to actuators in data files
@@ -129,8 +130,20 @@ custom_motors: {
 # detector related parameters #
 ###############################
 detector: "Maxipix"  # "Eiger2M", "Maxipix", "Eiger4M", "Merlin", "Timepix" or "Dummy"
-pixel_size: None
+custom_pixelsize: None
 # use this to declare the pixel size of the "Dummy" detector if different from 55e-6
+center_roi_x: None  # horizontal pixel number of the center of the ROI for data
+# loading, leave None to use the full detector
+center_roi_y: None  # vertical pixel number of the center of the ROI for data
+# loading, leave None to use the full detector
+roi_detector: None
+# [Vstart, Vstop, Hstart, Hstop]. If "center_roi_x" or "center_roi_y" are not None,
+# it will consider that the current values in roi_detector define a window around the
+# pixel [center_roi_y, center_roi_x] and the final output will be
+# [center_roi_y - roi_detector[0], center_roi_y + roi_detector[1],
+# center_roi_x - roi_detector[2], center_roi_x + roi_detector[3]].
+# leave None to use the full detector.
+# Use with center_fft='skip' if you want this exact size.
 template_imagefile: "data_mpx4_%05d.edf.gz"
 # template for ID01: 'data_mpx4_%05d.edf.gz' or 'align_eiger2M_%05d.edf.gz'
 # template for SIXS_2018: 'align.spec_ascan_mu_%05d.nxs'
@@ -202,11 +215,6 @@ reference_spacing: None  # for calibrating the thermal expansion,
 # if None it is fixed to 3.9236/norm(reflection) Pt
 reference_temperature: None
 # used to calibrate the thermal expansion, if None it is fixed to 293.15K (RT)
-##########################################################
-# parameters for averaging several reconstructed objects #
-##########################################################
-averaging_space: "reciprocal_space"  # 'direct_space' or 'reciprocal_space'
-threshold_avg: 0.90  # minimum correlation within reconstructed object for averaging
 #################################################
 # parameters for phase averaging or apodization #
 #################################################
diff --git a/doc/example/S11_config_preprocessing.yml b/bcdi/examples/S11_config_preprocessing.yml
similarity index 100%
rename from doc/example/S11_config_preprocessing.yml
rename to bcdi/examples/S11_config_preprocessing.yml
diff --git a/doc/example/modes_S11.h5 b/bcdi/examples/S11_modes.h5
similarity index 100%
rename from doc/example/modes_S11.h5
rename to bcdi/examples/S11_modes.h5
diff --git a/bcdi/examples/__init__.py b/bcdi/examples/__init__.py
new file mode 100644
index 000000000..36b839da1
--- /dev/null
+++ b/bcdi/examples/__init__.py
@@ -0,0 +1,13 @@
+# -*- coding: utf-8 -*-
+
+# BCDI: tools for pre(post)-processing Bragg coherent X-ray diffraction imaging data
+#   (c) 07/2017-06/2019 : CNRS UMR 7344 IM2NP
+#   (c) 07/2019-05/2021 : DESY PHOTON SCIENCE
+#       authors:
+#         Jerome Carnis, carnis_jerome@yahoo.fr
+
+"""
+BCDI examples.
+
+This package contains examples about preprocessing and postprocessing scripts.
+"""
diff --git a/conf/config_postprocessing.yml b/bcdi/examples/config_postprocessing.yml
similarity index 98%
rename from conf/config_postprocessing.yml
rename to bcdi/examples/config_postprocessing.yml
index 1468aa71d..1d0cfb9f2 100644
--- a/conf/config_postprocessing.yml
+++ b/bcdi/examples/config_postprocessing.yml
@@ -5,14 +5,13 @@ save_dir: "C:/Users/Jerome/Documents/data/dataset_P10/test/"
 # images will be saved here,
 # leave it to None otherwise (default to data directory's parent)
 data_dir: None
-# leave None to use the beamline default, or provide the full path to the output of the
-# phase retrieval.
+# leave None to use the beamline default, or provide the full path to the data.
 sample_name: "B15_syn_S1_2"
 # string in front of the scan number in the folder name.
 comment: ""  # comment in filenames, should start with _
-#########################################################
-# parameters used when averaging several reconstruction #
-#########################################################
+##########################################################
+# parameters used when averaging several reconstructions #
+##########################################################
 sort_method: "variance/mean"
 # 'mean_amplitude' or 'variance' or 'variance/mean' or 'volume', metric for averaging
 averaging_space: "reciprocal_space"  # 'direct_space' or 'reciprocal_space'
@@ -131,7 +130,7 @@ custom_motors: {
 # detector related parameters #
 ###############################
 detector: "Eiger4M"  # "Eiger2M", "Maxipix", "Eiger4M", "Merlin", "Timepix" or "Dummy"
-pixel_size: None
+custom_pixelsize: None
 # use this to declare the pixel size of the "Dummy" detector if different from 55e-6
 center_roi_x: 1577  # horizontal pixel number of the center of the ROI for data
 # loading, leave None to use the full detector
diff --git a/conf/config_preprocessing.yml b/bcdi/examples/config_preprocessing.yml
similarity index 97%
rename from conf/config_preprocessing.yml
rename to bcdi/examples/config_preprocessing.yml
index b478b6c91..214d18e00 100644
--- a/conf/config_preprocessing.yml
+++ b/bcdi/examples/config_preprocessing.yml
@@ -3,11 +3,8 @@ root_folder: "C:/Users/Jerome/Documents/data/dataset_P10/"
 # folder of the experiment, where all scans are stored
 save_dir: "C:/Users/Jerome/Documents/data/dataset_P10/test/"
 # images will be saved here, leave it to None otherwise
-data_dir: None  # leave None to use the beamline default,
-# '' empty string when there is no subfolder
-# (data directly in the scan folder), or a non-empty string for the subfolder name
-# (default to scan_folder/pynx/ or scan_folder/pynxraw/
-# depending on the setting of use_rawdata)
+data_dir: None
+# leave None to use the beamline default, or provide the full path to the data.
 sample_name: "B15_syn_S1_2"  # str or list of str of sample names
 # (string in front of the scan number in the folder name).
 # If only one name is indicated, it will be repeated to match the number of scans.
diff --git a/bcdi/postprocessing/postprocessing_runner.py b/bcdi/postprocessing/postprocessing_runner.py
index cdbfe123a..b3c7234c4 100644
--- a/bcdi/postprocessing/postprocessing_runner.py
+++ b/bcdi/postprocessing/postprocessing_runner.py
@@ -147,7 +147,7 @@ def run(prm):
         roi=roi_detector,
         binning=phasing_binning,
         preprocessing_binning=preprocessing_binning,
-        pixel_size=prm.get("pixel_size"),
+        custom_pixelsize=prm.get("custom_pixelsize"),
     )
 
     ####################################
diff --git a/bcdi/preprocessing/alias_dict_2021_unix.txt b/bcdi/preprocessing/alias_dict_2021_unix.txt
new file mode 100644
index 000000000..785ffc198
--- /dev/null
+++ b/bcdi/preprocessing/alias_dict_2021_unix.txt
@@ -0,0 +1,2166 @@
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+p919
+S'roi3c_old'
+p920
+sS'i14-c-c00/ex/roic-s140/detc'
+p921
+S'detc'
+p922
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+p923
+S'detc_hcs_old'
+p924
+sS'i14-c-c00/ex/beamlineenergy/energy'
+p925
+S'energy'
+p926
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+p927
+S'xbpm_x'
+p928
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+p929
+S'cpt'
+p930
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+p931
+S'detc2_fly'
+p932
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+p933
+S'dslvg'
+p934
+sS'i14-c-cx1/ex/fent_v.7-ssl3v/gap'
+p935
+S'ssl3vg'
+p936
+sS'i14-c-c00/dt/imag.2/image'
+p937
+S'cam2'
+p938
+sS'i14-c-cx2/dt/xbpm-base/flux'
+p939
+S'xbpm_f'
+p940
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+p941
+S'mu'
+p942
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+p943
+S'imon2'
+p944
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+p945
+S'drav'
+p946
+sS'i14-c-cx2/ex/eta-a-uhv/etaa'
+p947
+S'position'
+p948
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+p949
+S'qper'
+p950
+sS'i14-c-c09/ex/fent_h.4-ssl4h/position'
+p951
+S'ssl4hp'
+p952
+sS'i14-c-c00/dt/xpad.1-analyzer.1/chambercentroidx'
+p953
+S'cenx1'
+p954
+sS'i14-c-c00/dt/xpad.1-analyzer.1/chambercentroidy'
+p955
+S'ceny1'
+p956
+sS'i14-c-c04/ex/fast_att-mt_tx/position'
+p957
+S'att_mt'
+p958
+sS'i14-c-cx2/ex/fent_v.5-mt_g/poistion'
+p959
+S'ssl5vg'
+p960
+sS'i14-c-cx2/ex/omega-a-uhv-group/omegaa'
+p961
+S'omegaa'
+p962
+sS'i14-c-cx1/ex/fent_h.8-dsl1h/position'
+p963
+S'dslhp'
+p964
+sS'i14-c-cx1/ex/calc-continuoushkl/d'
+p965
+S'd'
+p966
+sS'i14-c-c09/op/mir3b-tpp/pitch'
+p967
+S'm3bpitch'
+p968
+sS'i14-c-cx1/ex/calc-continuoushkl/h'
+p969
+S'h'
+p970
+sS'i14-c-c00/dt/imag.5-navitar/image'
+p971
+S'cam5'
+p972
+sS'i14-c-cx1/ex/calc-continuoushkl/l'
+p973
+S'l'
+p974
+sS'i14-c-cx1/ex/calc-continuoushkl/q'
+p975
+S'q'
+p976
+sS'i14-c-cx1/ca/gascabinet/o2_actual'
+p977
+S'O2as'
+p978
+sS'i14-c-c00/ex/roic/roi4c_old'
+p979
+S'roi4c_old'
+p980
+sS'i14-c-cx1/op/cs.1-mt_tx.1/position'
+p981
+S'csx'
+p982
+sS'i14-c-cx2/ex/eta-a-uhv/position'
+p983
+S'etaa'
+p984
+sS'i14-c-cx1/ex/med-v-dif-group.1/delta'
+p985
+S'delta'
+p986
+sS'i14-c-cx1/dt/det_tx.1/position'
+p987
+S'eix'
+p988
+sS'i14-c-cx1/ex/hexapod-med/z'
+p989
+S'z'
+p990
+sS'i14-c-cx1/ex/hexapod-med/y'
+p991
+S'y'
+p992
+sS'i14-c-c00/dt/dtc_sdd.1/dataspectrum'
+p993
+S'fluo'
+p994
+sS'i14-c-cx1/ex/hexapod-med/w'
+p995
+S'w'
+p996
+sS'i14-c-cx1/ex/hexapod-med/v'
+p997
+S'v'
+p998
+sS'i14-c-cx1/ex/hexapod-med/u'
+p999
+S'u'
+p1000
+sS'i14-c-cx1/ex/dif-med.h-qpar/position'
+p1001
+S'qpar'
+p1002
+sS'i14-c-c00/ex/roic/att'
+p1003
+S'att_sbs_xpad'
+p1004
+sS'i14-c-cx1/ex/eta-a-med/position'
+p1005
+g44
+sS'i14-c-c06/dt/imag.1-analyzer/xprojfitcenter'
+p1006
+S'camC6_x'
+p1007
+sS'i14-c-cx1/ex/med-h-dif-group.1/etaa'
+p1008
+g638
+sS'i14-c-c07/dt/mi_ddio.2-mt_tz.1/position'
+p1009
+S'mon2'
+p1010
+sS'i14-c-c00/ex/roic-s140/att'
+p1011
+S'att_sbs_xpad'
+p1012
+sS'i14-c-cx1/dt/det_tz.1/position'
+p1013
+S'eiz'
+p1014
+sS'i14-c-c00/dt/xpad.1-analyzer.4/maxintensity'
+p1015
+S'max4'
+p1016
+sS'i14-c-cx2/ex/eta-a-uhv-group/etaa'
+p1017
+S'etaa'
+p1018
+sS'i14-c-cx1/ca/gascabinet/mix_actual'
+p1019
+S'mixa'
+p1020
+sS'i14-c-c00/dt/merlin-quad-roicounters/sum2'
+p1021
+S'roi2_merlin'
+p1022
+sS'i14-c-c00/dt/merlin-quad-roicounters/sum3'
+p1023
+S'roi3_merlin'
+p1024
+sS'i14-c-c00/dt/merlin-quad-roicounters/sum0'
+p1025
+S'roi0_merlin'
+p1026
+sS'i14-c-c00/dt/merlin-quad-roicounters/sum1'
+p1027
+S'roi1_merlin'
+p1028
+sS'i14-c-cx1/ex/omega-med-v/position'
+p1029
+S'omegaS'
+p1030
+sS'ans-c14/ei/c-u20_energy/harmonic'
+p1031
+S'harmonic'
+p1032
+sS'i14-c-c00/dt/maxipix.det/image'
+p1033
+S'maxpix'
+p1034
+sS'i14-c-c06/op/mir2-tpp/xc'
+p1035
+S'm2x'
+p1036
+sS'i14-c-cx1/ex/calc-continuoushkl/qper'
+p1037
+S'qper'
+p1038
+sS'i14-c-cx2/ex/fent_v.5-mt_p/position'
+p1039
+S'ssl5vp'
+p1040
+sS'i14-c-c00/ex/seuil.1-tangoparser/cpt1_i3'
+p1041
+S'ln_cpt_i0'
+p1042
+sS'i14-c-c04/ex/fast_att2.med-h-calc/singleattenuation'
+p1043
+S'detc_new'
+p1044
+sS'i14-c-cx1/ex/dif-med.h-l/position'
+p1045
+S'l'
+p1046
+sS'i14-c-cx1/ex/dif-med.1-h/position'
+p1047
+S'h'
+p1048
+sS'i14-c-c00/ca/cpt.2/delta'
+p1049
+S'delta'
+p1050
+sS'i14-c-c00/dt/maxipix-analyzer.1/meanintensity'
+p1051
+S'roi0_M'
+p1052
+sS'i14-c-cx1/ca/gascabinet/ar_actual'
+p1053
+S'Aras'
+p1054
+sS'i14-c-c06/op/mir2-tpp/pitch'
+p1055
+S'm2pitch'
+p1056
+sS'i14-c-cx2/dt/xbpm-base/intensity'
+p1057
+S'xbpm_i'
+p1058
+sS'i14-c-cx1/ex/fent_h.8-dsl1h/gap'
+p1059
+S'dslhg'
+p1060
+sS'i14-c-cx1/ex/cbsx/position'
+p1061
+S'sstrx'
+p1062
+sS'i14-c-cx2/ex/delta-a-uhv-group/deltaa'
+p1063
+S'deltaa'
+p1064
+sS'i14-c-cx1/ca/gascabinet/h2_actualflow'
+p1065
+S'H2af'
+p1066
+sS'i14-c-c00/ex/roic/detc'
+p1067
+S'detc'
+p1068
+sS'i14-c-cx1/ex/diff-med-tpp/pitch'
+p1069
+S'basepitch'
+p1070
+sS'flyscan/misc/detc-med-v-old/singleattenuation'
+p1071
+S'detc_old'
+p1072
+sS'tmp/test/cryojet/temperature'
+p1073
+S'cryojet'
+p1074
+sS'i14-c-cx2/ex/fent_h.5-mt_p/position'
+p1075
+S'ssl5hp'
+p1076
+sS'i14-c-cx1/op/osa.1-mt_tx.1/position'
+p1077
+S'osax'
+p1078
+sS'i14-c-c00/ca/dio_o.3/g'
+p1079
+S'sh_ev'
+p1080
+s.
diff --git a/bcdi/utils/parameters.py b/bcdi/utils/parameters.py
index 70e3d9e9c..4d2f0403b 100644
--- a/bcdi/utils/parameters.py
+++ b/bcdi/utils/parameters.py
@@ -229,6 +229,10 @@ def valid_param(key: str, value: Any) -> Tuple[Any, bool]:
         )
     elif key == "custom_motors":
         valid.valid_container(value, container_types=dict, allow_none=True, name=key)
+    elif key == "custom_pixelsize":
+        valid.valid_item(
+            value, allowed_types=Real, min_excluded=0, allow_none=True, name=key
+        )
     elif key == "data_dir":
         if value is not None:
             valid.valid_container(value, container_types=str, min_length=1, name=key)
@@ -402,10 +406,6 @@ def valid_param(key: str, value: Any) -> Tuple[Any, bool]:
             raise ParameterError(key, value, allowed)
     elif key == "photon_threshold":
         valid.valid_item(value, allowed_types=Real, min_included=0, name=key)
-    elif key == "pixel_size":
-        valid.valid_item(
-            value, allowed_types=Real, min_excluded=0, allow_none=True, name=key
-        )
     elif key == "preprocessing_binning":
         valid.valid_container(
             value,
diff --git a/bcdi/utils/validation.py b/bcdi/utils/validation.py
index 8b23a9b74..d8044415f 100644
--- a/bcdi/utils/validation.py
+++ b/bcdi/utils/validation.py
@@ -269,8 +269,10 @@ def valid_item(
 
     # check the type of obj
     if value is not None and not isinstance(value, allowed_types):
-        raise TypeError(f"{name}: wrong type for value, "
-                        f"allowed is {allowed_types}, got {type(value)}")
+        raise TypeError(
+            f"{name}: wrong type for value, "
+            f"allowed is {allowed_types}, got {type(value)}"
+        )
 
     # check min_included
     if min_included is not None and value is not None:
diff --git a/doc/EXAMPLE_POSTPROCESSING.rst b/doc/EXAMPLE_POSTPROCESSING.rst
index 7ae9dd0c8..a7c5a7ee4 100644
--- a/doc/EXAMPLE_POSTPROCESSING.rst
+++ b/doc/EXAMPLE_POSTPROCESSING.rst
@@ -8,20 +8,23 @@ removal, refraction correction, interpolation of the object from the detector fr
 an orthonormal frame etc...
 
 It is assumed that the phase retrieval of this dataset has been realized
-(e.g. using PyNX), and that the data provided as input is in direct space, with the
-first axis corresponding to the rocking dimension. If it is still in the detector frame,
-the second axis corresponds to the detector vertical axis and the third axis to the
-detector horizontal axis.
+(e.g. using PyNX), and that the data provided as input is in direct space. If it is
+still in the detector frame, the first axis is expected to correspond to the rocking
+dimension, the second axis corresponds to the detector vertical axis and the third axis
+to the detector horizontal axis.
 
 The most usefull script is ``bcdi_strain.py``. It requires a YAML config
-file, which for this example is ``bcdi/doc/example/S11_config_postprocessing.yml``.
+file, which for this example is ``bcdi/examples/S11_config_postprocessing.yml``.
+A result file named ``S11_modes.h5`` is also provided in ``bcdi/examples``. This is the
+output of the decomposition into orthogonal modes after phase retrieval with PyNX. For
+convenience, copy ``S11_modes.h5`` to the data folder "path_to/CXIDB-I182/CH4760/S11/".
 
 In order to have it running correctly on your machine, you will have to modify the paths
 corresponding to the following parameters::
 
     root_folder: "path_to/CXIDB-I182/CH4760/"
     save_dir: "path_to_saving_directory"
-    data_dir: "path_to/bcdi/doc/example/modes_S11.h5"
+    data_dir: "path_to/CXIDB-I182/CH4760/S11/"
 
 The script should run properly with other parameters unchanged.
 
@@ -30,6 +33,24 @@ practice), run:
 
 ``python path_to/bcdi_strain.py --conf path_to/S11_config_postprocessing.yml``
 
+If you installed the package, the scripts and configuration files will be located at the
+following location (example with the ``bcdi`` package installed in a Python3.8 conda
+virtual environment named ``myenv``):
+
+- on Windows:
+
+    - scripts in ``path_to\anaconda3\envs\myenv\Scripts``
+    - config files in ``path_to\anaconda3\envs\myenv\Lib\site-packages\bcdi\examples``
+
+- on Linux:
+
+    - scripts in ``/path_to/anaconda3/envs/myenv/bin``
+    - config files in ``/path_to/anaconda3/envs/myenv/lib/python3.8/site-packages/bcdi/examples``
+
+After launching the script, a pop-up window opens, so that you can select the files to
+load. By default this window opens at the location defined by ``data_dir``, but you can
+navigate to any location on your computer.
+
 The phase retrieval output will be loaded and several postprocessing steps are applied
 automatically. Below are few important points about parameters:
 
@@ -50,3 +71,5 @@ automatically. Below are few important points about parameters:
      position) with the parameters `outofplane_angle` and `inplane_angle`. If these
      parameters are None, the script will try to load them from the log file and will
      apply the correction if the direct beam position is provided in the config file.
+     The raw data (detector frames) are then expected to be located in ``data_dir``, and
+     an exception will be raised in the contrary.
diff --git a/doc/EXAMPLE_PREPROCESSING.rst b/doc/EXAMPLE_PREPROCESSING.rst
index ea209aa51..9b16bf96d 100644
--- a/doc/EXAMPLE_PREPROCESSING.rst
+++ b/doc/EXAMPLE_PREPROCESSING.rst
@@ -5,7 +5,7 @@ This example will guide you through the pre-processing of an experimental BCDI d
 measured at the European Synchrotron Radiation Facility, beamline ID01.
 
 The most usefull script is ``bcdi_preprocessing_BCDI.py``. It requires a YAML config
-file, which for this example is ``bcdi/doc/example/S11_config_preprocessing.yml``.
+file, which for this example is ``bcdi/examples/S11_config_preprocessing.yml``.
 
 In order to have it running correctly on your machine, you will have to modify the paths
 corresponding to the following parameters::
@@ -21,6 +21,20 @@ practice), run:
 
 ``python path_to/bcdi_preprocessing_BCDI.py --conf path_to/S11_config_preprocessing.yml``
 
+If you installed the package, the scripts and configuration files will be located at the
+following location (example with the ``bcdi`` package installed in a Python3.8 conda
+virtual environment named ``myenv``):
+
+- on Windows:
+
+    - scripts in ``path_to\anaconda3\envs\myenv\Scripts``
+    - config files in ``path_to\anaconda3\envs\myenv\Lib\site-packages\bcdi\examples``
+
+- on Linux:
+
+    - scripts in ``/path_to/anaconda3/envs/myenv/bin``
+    - config files in ``/path_to/anaconda3/envs/myenv/lib/python3.8/site-packages/bcdi/examples``
+
 The data will be loaded and a plot is opened. This allows you to check whether, e.g.,
 the region of interest provided is correct. Click on the plot to resume the execution
 of the script.
diff --git a/doc/HISTORY.rst b/doc/HISTORY.rst
index 56b7d4372..734a54d68 100644
--- a/doc/HISTORY.rst
+++ b/doc/HISTORY.rst
@@ -1,5 +1,8 @@
-Future:
--------
+Version 0.2.2:
+--------------
+
+* Move the configuration files and example modes data to a subpackage ``bcdi.examples``
+  so that they are distributed with the builds and wheels.
 
 * Move the run functions from `bcdi_strain.py` and `bcdi_preprocessing_BCDI.py` to new
   dedicated modules `postprocessing.postprocessing_runner` and
diff --git a/doc/index.rst b/doc/index.rst
index 6cc393ac5..675675075 100644
--- a/doc/index.rst
+++ b/doc/index.rst
@@ -20,12 +20,12 @@ Examples
 ========
 
 In this section you will find two examples showing how to pre-process and post-process
-experimental BCDI using this package. In order to run the example, you need first to
-get the data, which is available on the Coherent X-ray Imaging DataBank. Please
-download the dataset ID182 from the following location:
+experimental BCDI data using this package. In order to run the examples, you need first
+to get the data, which is available at the Coherent X-ray Imaging DataBank. Please
+download the dataset ID182 from the following website:
 https://www.cxidb.org/id-182.html
 
-Extract files, you should get the following::
+Extract the files, you should get the following::
 
     CXIDB-182/
         Readme ID 182.txt
diff --git a/dodo.py b/dodo.py
index e67f4166a..3a41facaf 100644
--- a/dodo.py
+++ b/dodo.py
@@ -149,17 +149,20 @@ def task_mypy():
 
 def task_check_links_doc():
     """Check external links in the doc using sphinx."""
-    make = Path(get_path()) / "doc/make"
+    sourcedir = Path(get_path()) / "doc"
+    outputdir = sourcedir / "doc_html"
     return {
-        "actions": [f"{make} linkcheck"],
+        "actions": [f"sphinx-build -b linkcheck {sourcedir} {outputdir}"],
         "verbosity": 1,
     }
 
 
 def task_build_doc():
     """Build the documentation with sphinx."""
+    sourcedir = Path(get_path()) / "doc"
+    outputdir = sourcedir / "doc_html"
     return {
-        "actions": ["sphinx-build doc doc/doc_html"],
+        "actions": [f"sphinx-build -b html {sourcedir} {outputdir}"],
         "targets": ["docs/"],
     }
 
diff --git a/scripts/postprocessing/bcdi_strain.py b/scripts/postprocessing/bcdi_strain.py
index f9a28f477..8cfba4efa 100644
--- a/scripts/postprocessing/bcdi_strain.py
+++ b/scripts/postprocessing/bcdi_strain.py
@@ -14,7 +14,9 @@
 from bcdi.postprocessing.postprocessing_runner import run
 from bcdi.utils.parser import add_cli_parameters, ConfigParser
 
-CONFIG_FILE = "C:/Users/Jerome/Documents/myscripts/bcdi/conf/config_postprocessing.yml"
+CONFIG_FILE = (
+    "C:/Users/Jerome/Documents/myscripts/bcdi/bcdi/examples/config_postprocessing.yml"
+)
 
 helptext = """
 Interpolate the output of the phase retrieval into an orthonormal frame,
diff --git a/scripts/preprocessing/bcdi_preprocess_BCDI.py b/scripts/preprocessing/bcdi_preprocess_BCDI.py
index 0696885c8..50bfcdc0f 100644
--- a/scripts/preprocessing/bcdi_preprocess_BCDI.py
+++ b/scripts/preprocessing/bcdi_preprocess_BCDI.py
@@ -14,7 +14,9 @@
 from bcdi.preprocessing.preprocessing_runner import run
 from bcdi.utils.parser import add_cli_parameters, ConfigParser
 
-CONFIG_FILE = "C:/Users/Jerome/Documents/myscripts/bcdi/conf/config_preprocessing.yml"
+CONFIG_FILE = (
+    "C:/Users/Jerome/Documents/myscripts/bcdi/bcdi/examples/config_preprocessing.yml"
+)
 
 helptext = """
 Prepare experimental data for Bragg CDI phasing: crop/pad, center, mask, normalize and
diff --git a/tests/utils/test_parser.py b/tests/utils/test_parser.py
index 32d7c7852..119548e1d 100644
--- a/tests/utils/test_parser.py
+++ b/tests/utils/test_parser.py
@@ -11,7 +11,7 @@
 from bcdi.utils.parser import ConfigParser
 
 here = Path(__file__).parent
-CONFIG = str(here.parents[1] / "conf/config_postprocessing.yml")
+CONFIG = str(here.parents[1] / "bcdi/examples/config_postprocessing.yml")
 
 
 def run_tests(test_class):