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genomic_sequence_localization-config.yaml
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description: A relationship between a sequence feature and an entity it is localized
to. The reference entity may be a chromosome, chromosome region or information entity
such as a contig
display_name: !!python/object/new:biolinkml.meta.ClassDefinitionName
- genomic sequence localization
document_category: !!python/object/new:biolinkml.meta.ClassDefinitionName
- genomic sequence localization
fields:
- display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- genomic sequence localization_subject
id: subject
- description: the relationship type by which a subject is connected to an object
in an association
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- relation
id: relation
- display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- genomic sequence localization_object
id: object
- description: A unique identifier for an association
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- association_id
id: id
- description: if set to true, then the association is negated i.e. is not true
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- negated
id: negated
- description: connects an association to the type of association (e.g. gene to phenotype)
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- association type
id: association_type
- cardinality: multi
description: connects an association to qualifiers that modify or qualify the meaning
of that association
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- qualifiers
id: qualifiers
- cardinality: multi
description: connects an association to publications supporting the association
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- publications
id: publications
- description: connects an association to the agent (person, organization or group)
that provided it
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- provided by
id: provided_by
- description: any slot that relates an association to another entity
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- association slot
id: association_slot
- description: A high-level grouping for the relationship type. AKA minimal predicate.
This is analogous to category for nodes.
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- edge label
id: edge_label
- display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- start interbase coordinate
id: start_interbase_coordinate
- display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- end interbase coordinate
id: end_interbase_coordinate
- description: TODO
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- genome build
id: genome_build
- description: TODO
display_name: !!python/object/new:biolinkml.meta.SlotDefinitionName
- phase
id: phase
id: genomic_sequence_localization
schema_generating: true
weight: 20