diff --git a/README.md b/README.md index 7c6b06d1e..8bf23a3a3 100644 --- a/README.md +++ b/README.md @@ -6,7 +6,9 @@ Datasets in this repository are found in the [`data`](https://github.com/ccodwg/ On April 30, 2022, `CovidTimelineCanada` superseded the original [`Covid19Canada`](https://github.com/ccodwg/Covid19Canada) dataset, which was first made available in March of 2020. For those familiar with the original dataset, please see [Transitioning from `Covid19Canada`](docs/transitioning_from_Covid19Canada.md). -## Quick start guide +A simple [dashboard](https://ccodwg.github.io/CovidTimelineCanada-js-dashboard/) is available to explore the data available in the Timeline of COVID-19 in Canada dataset. + +## Getting started We offer three groups of datasets: health region-level (`hr`), for case and death data only, province/territory-level (`pt`), for all data types, and Canada-level (`can`), for all data types. Because each province/territory has a different update schedule, the most recent date of data for each region is different; for the same reason, the Canada-level data are incomplete in [recent](https://github.com/ccodwg/CovidTimelineCanada/blob/main/data/can/cases_can_completeness.json) [days](https://github.com/ccodwg/CovidTimelineCanada/blob/main/data/can/deaths_can_completeness.json). @@ -42,8 +44,8 @@ Some provinces no longer offer health region-level data for cases and/or deaths. The following datasets are available: -- Cases (`cases`) -- Deaths (`deaths`) +- Cases (`cases`) (health region or province/territory) +- Deaths (`deaths`) (health region or province/territory) - Active hospitalizations (`hospitalizations`) - Active ICU (`icu`) - Tests completed (`tests_completed`) @@ -52,7 +54,7 @@ The following datasets are available: While we do our best to ensure comparability for the same metrics across different provinces/territories, some regions use different difinitions for the same metric (e.g., how COVID-19 deaths are defined). Reporting of a metric may also change over time in the same region. See [Detailed description of data sources](#detailed-description-of-data-sources) for more details. -For a summary plot of each dataset, see [Included datasets](#included-datasets). +For a summary plot of each dataset, see our [dashboard](https://ccodwg.github.io/CovidTimelineCanada-js-dashboard/). ## Data format @@ -85,126 +87,6 @@ To contribute to this project, please refer to the ongoing discussions in the [i We must also identify gaps in publicly available data. These data may then be requested from the relevant agencies or acquired via Access to Information requests (see [an example with Sasksatchewan's COVID-19 data](https://data.gripe/covid-19-in-saskatchewan/)). -## Included datasets - -The following datasets are included in this repository: - -* Cases by province/territory (`data/pt/cases_pt.csv`) and health region (`data/hr/cases_hr.csv`) -
- Plots (click to expand) - - ![cases](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/cases_pt.png) - ![cases](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/cases_hr.png) - -
- -* Deaths by province/territory (`data/pt/deaths_pt.csv`) and health region (`data/hr/deaths_hr.csv`) -
- Plots (click to expand) - - ![deaths](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/deaths_pt.png) - ![deaths](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/deaths_hr.png) - -
- -* Tests completed by province/territory (`data/pt/tests_completed_pt.csv`) -
- Plot (click to expand) - - ![testing](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/tests_completed_pt.png) - -
- -* Hospitalizations (non-ICU and ICU) by province/territory (`data/pt/hospitalizations_pt.csv`) -
- Plot (click to expand) - - ![hosp](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/hospitalizations_pt.png) - -
- -* ICU occupancy by province/territory (`data/pt/icu_pt.csv`) -
- Plot (click to expand) - - ![icu](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/icu_pt.png) - -
- -* Vaccine coverage (dose 1) by province/territory (`data/pt/vaccine_coverage_dose_1_pt.csv`) -
- Plot (click to expand) - - ![vaccine_coverage_dose_1](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_coverage_dose_1_pt.png) - -
- -* Vaccine coverage (dose 2) by province/territory (`data/pt/vaccine_coverage_dose_2_pt.csv`) -
- Plot (click to expand) - - ![vaccine_coverage_dose_2](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_coverage_dose_2_pt.png) - -
- -* Vaccine coverage (dose 3) by province/territory (`data/pt/vaccine_coverage_dose_3_pt.csv`) -
- Plot (click to expand) - - ![vaccine_coverage_dose_3](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_coverage_dose_3_pt.png) - -
- -* Vaccine coverage (dose 4) by province/territory (`data/pt/vaccine_coverage_dose_4_pt.csv`) -
- Plot (click to expand) - - ![vaccine_coverage_dose_4](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_coverage_dose_4_pt.png) - -
- -* Vaccine administration (total doses) by province/territory (`data/pt/vaccine_administration_total_doses_pt.csv`) -
- Plot (click to expand) - - ![vaccine_administration_total_doses](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_administration_total_doses_pt.png) - -
- -* Vaccine administration (dose 1) by province/territory (`data/pt/vaccine_administration_dose_1_pt.csv`) -
- Plot (click to expand) - - ![vaccine_administration_dose_1](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_administration_dose_1_pt.png) - -
- -* Vaccine administration (dose 2) by province/territory (`data/pt/vaccine_administration_dose_2_pt.csv`) -
- Plot (click to expand) - - ![vaccine_administration_dose_2](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_administration_dose_2_pt.png) - -
- -* Vaccine administration (dose 3) by province/territory (`data/pt/vaccine_administration_dose_3_pt.csv`) -
- Plot (click to expand) - - ![vaccine_administration_dose_3](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_administration_dose_3_pt.png) - -
- -* Vaccine administration (dose 4) by province/territory (`data/pt/vaccine_administration_dose_4_pt.csv`) -
- Plot (click to expand) - - ![vaccine_administration_dose_4](https://raw.githubusercontent.com/ccodwg/CovidTimelineCanadaPlots/main/plots/vaccine_administration_dose_4_pt.png) - -
- -Both the cumulative values (`value`) and the daily differences (`value_daily`) are given for each date where data are available. - ## How these data are updated The data in this repository are updated several times per day by [`Covid19CanadaBot`](https://github.com/ccodwg/Covid19CanadaBot) using the script [`update_data.R`](https://github.com/ccodwg/CovidTimelineCanada/blob/main/update_data.R).