-
Notifications
You must be signed in to change notification settings - Fork 0
/
DESCRIPTION
39 lines (39 loc) · 1.3 KB
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
Package: cosimu
Title: Cosimu: Models and methods for the simulation of interconnected differential expression signatures sharing the same basal level
Version: 2.0
Authors@R:
person(given = "Catalina",
family = "Gonzalez Gomez",
role = c("aut", "cre"),
email = "catalina.gonzalez-gomez@univ-lyon1.fr");
person(given = "Julien",
family = "Fouret",
role = c("aut", "cre"),
email = "julien.fouret@univ-lyon1.fr")
Description: Cosimu is a package that simulates fold change vectors (signatures) related by a connectivity parameter as input, each element of the vectors represents a gene or transcript log2 fold changes in expression levels. In order to simulate related signautres, we decomposed the signatures into three layers: modality, sub-modality and probability layers.
License: GPL (>= 3) + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
Imports:
purrr,
stats,
GenOrd,
R6,
copula,
LaplacesDemon,
yaml
Suggests:
testthat (>= 3.0.0),
knitr,
rmarkdown
VignetteBuilder: knitr
VignetteIndexEntry: "example.Rmd"
Config/testthat/edition: 3
Collate:
'class_ModalityObj.R'
'class_ProbabilityObj.R'
'class_SubmodalityObj.R'
'class_SignatureObj.R'
'utils.R'
RoxygenNote: 7.2.3