Fix call caching bug

Fixes a bug where call caching could only skip steps with S3 inputs.

Add option to output status JSON files

• Add a new variable output_status_json_files. If set to true, swipe will upload a JSON file with the status and possible description of each task during execution, useful for progress reporting

Support AWS provider v4 + Fix cron space check script

• Support AWS provider major version 4
• Fix cron space check script

Fix issues with status plugin

• Use MINIWDL__S3_PROGRESSIVE_UPLOAD__URI_PREFIX for the upload of status jsons
• Fix a bug with the status plugin
• Added tests

fix bug where status updates get overwritten with call caching

v1.1.4

fix bug where status updates get overwritten with call caching (#94)

Add czid_long_read_mngs to our custom plugin

• swipe comes from the czid internal workflow running functionality. We have a plugin that contains some functionality specific to our application that needs to be in swipe. It is only activated for workflows with specific names. We are adding a new workflow that we want to leverage this functionality so I added the name here.

Improve error logging for timeouts and out of memory errors

• Removed confusing file not found error message that prints in the event of timeouts and memory errors
• Add logging hints when the miniwdl process is killed by a sigint or sigterm

Revert adding resource level permissions to describe instances

• The previous change added resource level permissions to the DescribeInstances actions, but did not include the right resources for SubmitJob

Spot Optimized Allocation Strategy

v1.1.0

Support customn allocation strategies with default to spot optimized …

First Non-Beta Release

We have extensive testing and have been using this in prod for some time so we felt it was safe to move this out of beta.

In this release we have:

• Increasing S3 Upload Retries
• Version upgrade for miniwdl