forked from bioperl/bioperl-live
-
Notifications
You must be signed in to change notification settings - Fork 0
/
AUTHORS
244 lines (123 loc) · 6.26 KB
/
AUTHORS
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
=head1 PRIMARY AUTHORS AND MAJOR CONTRIBUTORS TO BIOPERL
=head2 Releases co-ordinated and submitted by bioperl core devs.
=over
=item * Sendu Bala <bix at sendu.me.uk>
=item * Chris Dagdigian <dag at sonsorol.org>
=item * Christopher Fields <cjfields at bioperl.org>
=item * Mark Jensen <maj@fortinbras.us>
=item * Hilmar Lapp <hlapp at gmx.net>
=item * Heikki Lehväslaiho <heikki at ebi.ac.uk>
=item * Aaron Mackey <amackey at pcbi.upenn.edu>
=item * Brian Osborne <bosborne at bioteam.net>
=item * Jason Stajich <jason at bioperl.org>
=item * Lincoln Stein <lstein at cshl.org>
=back
=head2 Previous Bioperl Coordinators:
=over
=item * Ewan Birney <birney at ebi.ac.uk>
=item * Steven Brenner <brenner at compbio.berkeley.edu>
=item * Georg Fuellen <fuellen at alum.mit.edu>
=item * Steve Chervitz <sac at bioperl.org>
=back
=head2 Major Contributors
(Feel free to add descriptions of which modules you are responsible
for if you see fit)
=over
=item * Richard Adams <Richard.Adams at ed.ac.uk>
=item * Shuly Avraham <avraham at cshl.org> - Bio::Graphics::Glyph
=item * Peter Blaiklock <pblaiklo at restrictionmapper.org>
=item * Benjamin Berman <benb at fruitfly.berkeley.edu>
=item * Matthew Betts <Matthew.Betts at ii.uib.no>
=item * David Block <dblock at gnf.org>
=item * Kris Boulez <kris.boulez at algonomics.com>
=item * Tim Bunce <Tim.Bunce at pobox.com> - code optimizations
=item * Scott Cain <scott at scottcain.net> - Bio::Graphics::Glyph, Bio::DB::GFF::Adaptor::dbi::pg, GFF related tools and scripts
=item * Yee Man Chan <ymc at yahoo.com> - Bio::Tools::dpAlign
=item * Brad Chapman <chapmanb at arches.uga.edu>
=item * Roy R. Chaudhuri <roy.chaudhuri at gmail.com> - Bio::SeqUtils Bio::Align::Utilities
=item * Michele Clamp <michele at sanger.ac.uk>
=item * Malcolm Cook <mec at stowers-institute.org>
=item * Tony Cox <avc at sanger.ac.uk>
=item * James Cuff <james at sanger.ac.uk>
=item * Andrew Dalke <dalke at acm.org>
=item * Allen Day <allenday at ucla.edu>
=item * Jared Fox <jaredfox at ucla.edu> - Bio::SeqIO::interpro
=item * Brian O'Connor <boconnor at ucla.edu> - Bio::TreeIO::svggraph
=item * James Diggans <JDiggans at genelogic.com>
=item * Peter Dimitrov <dimitrov at gnf.org> - Bio::Ontology
=item * Rich Dobson <r.j.dobson at qmul.ac.uk> - Bio::PopGen::IO::hapmap,phase
=item * Paul Edlefsen <pedlefsen at systemsbiology.org>
=item * Rob Edwards <redwards at utmem.edu> - Bio::Restriction
=item * Arne Elofsson <arne at sbc.su.se>
=item * David Evans <David.Evans at vir.gla.ac.uk>
=item * Mark Fiers <M.W.E.J.Fiers at plant.wag-ur.nl>
=item * The Fugu Team <fuguteam at fugu-sg.org>
=item * Luc Gauthier <lgauthie at hotmail.com>
=item * James Gilbert <jgrg at sanger.ac.uk>
=item * Nat Goodman
=item * Ed Green <ed at compbio.berkeley.edu>
=item * Matthew Hahn <matthew.hahn at duke.edu>
=item * Roger Hall <roger at iosea.com>
=item * Todd Harris <harris at cshl.org> - SVG support in Bio::Graphics
=item * Mauricio Herrera Cuadra <mauricio at open-bio.org>
=item * Ian Holmes <ihn at fruitfly.org>
=item * Shawn Hoon <shawnh at fugu-sg.org>
=item * Robert Hubley <rhubley at systemsbiology.org>
=item * Joseph Insana <insana at ebi.ac.uk> - Bio::LiveSeq
=item * Donald Jackson <donald.jackson at bms.com> - SiRNA
=item * Keith James <kdj at sanger.ac.uk> - Bio::Tools::Geneid
=item * Mark A. Jensen <maj at fortinbras.us> - Bio::DB::HIVQuery, Bio::Search::Tiling
=item * Nicolas Joly <njoly at pasteur.fr>
=item * Ian Korf <ikorf at sapiens.wustl.edu>
=item * Dan Kortschak <kortschak at rsbs.anu.edu.au>
=item * Arek Kasprzyk <arek at ebi.ac.uk>
=item * Andreas Kähäri <andreas.kahari at ebi.ac.uk>
=item * Charles C. Kim <cckim at stanford.edu>
=item * Stefan Kirov <skirov at utk.edu> - Bio::Matrix::PSM
=item * Balamurugan Kumarasamy <savikalpa at fugu-sg.org>
=item * Josh Lauricha <laurichj at cs.ucr.edu> - Bio::SeqIO::tigr
=item * Eckhard Lehmann <ecky at e-lehmann.de>
=item * Catherine Letondal <letondal at pasteur.fr>
=item * Philip Lijnzaad <p.lijnzaad at med.uu.nl>
=item * Brad Marshall <bradmars at yahoo.com>
=item * Chad Matsalla <chad at dieselwurks.com>
=item * Andrew Macgregor <andrew at anatomy.otago.ac.nz>
=item * Sheldon McKay <mckays at cshl.edu>
=item * Dave Messina <dmessina at cpan.org> - Deobfuscator, judicious meddling
=item * Chase Miller <chmille4 at gmail.com> - Bio::Nexml and related IO modules
=item * Juha Muilu <muilu at ebi.ac.uk>
=item * Chris Mungall <cjm at fruitfly.org>
=item * Giri Narasimhan <giri at cs.fiu.edu>
=item * Xiaokang Pan <pan at cshl.org> - Bio::Graphics::Glyph
=item * Jong Park
=item * Matthew Pocock <matthew_pocock at yahoo.co.uk>
=item * Lorenz Pollack <lorenz at ist.org> -- BPlite porting
=item * Richard Resnick -- original Bio::Seq
=item * Todd Richmond <todd at andrew2.stanford.edu>
=item * Peter Schattner <schattner at alum.mit.edu>
=item * Torsten Seemann <torsten.seemann at infotech.monash.edu.au> -- Bio::Tools::Run::StandaloneBlast
=item * Martin Senger <senger at ebi.ac.uk> -- Bio::Biblio
=item * Nigam Shah <nigam at psu.edu>
=item * Shengqiang Shu <sshu at bdgp.lbl.gov> - Bio::Graphics::Glyph
=item * Allen Smith <allens at cpan.org> -- Bio::Matrix and Bio::SimpleAlign fixes
=item * Marc Sohrmann <ms2 at sanger.ac.uk>
=item * Robson Francisco de Souza <robfsouza at gmail.com> - Bio::Assembly
=item * Mark Southern <mark_southern at merck.com>
=item * Will Spooner <whs at sanger.ac.uk>
=item * Arne Stabenau <stabenau at ebi.ac.uk>
=item * Elia Stupka <elia at fugu-sg.org>
=item * Gert Thijs <gert.thijs at esat.kuleuven.ac.be>
=item * James Thompson <tex at biosysadmin.com> - Bio::Matrix::PSM protein-related modules.
=item * Charles Tilford <tilfordc at bms.com>
=item * Anthony Underwood <aunderwood at phls.org.uk>
=item * Paul-Christophe Varoutas
=item * Andrew G. Walsh <paeruginosa at hotmail.com>
=item * Kai Wang <tumorimmunology at yahoo.com>
=item * Gary Williams <G.Williams at hgmp.mrc.ac.uk>
=item * Mark Wilkinson <mwilkinson at gene.pbi.nrc.ca>
=item * Helge Weissig <helgew at sdsc.edu>
=item * Juguang Xiao <juguang at tll.org.sg>
=item * Alex Zelensky <alex_zelensky at mac.com> - Bioperl-DB
=item * Peili Zhang <peili at morgan.harvard.edu>
=item * Christian M. Zmasek <czmasek at gnf.org> - Bio::Phenotype & Bio::Ontology
=back