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DESCRIPTION
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DESCRIPTION
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Package: AstralPlane
Title: R Package For Preparing, Running, Analyzing and Plotting for the Species Tree Program ASTRAL-III
Version: 0.1.1
Authors@R:
person(given = "Carl",
family = "Hutter",
role = c("aut", "cre"),
email = "car.hutter@gmail.com",
comment = c(ORCID = "0000-0001-6381-6339"))
Description: This R package is meant to facilitate ASTRAL-III analyses and provide easy R plotting.
The package helps prepare analyses from a folder of gene trees, runs astral from R, and creates
a new S4 object type "AstralPlane" for easily analyzing the output from ASTRAL-III. The package
provides several different types of plots, from pie charts on phylogenetic trees representing
the quartet frequencies to plotting the gene tree frequencies as far plots.
Depends: R (>= 3.5.1)
License: `use_gpl3_license()`
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.0
Imports:
ape (>= 5.0),
stringr (>= 1.4)