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add Pokay names as 'pokay_id'
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+32
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1 file changed

+32
-16
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assets/virus_geneCoordinates/NC_045512.2/NC_045512.2.json

Lines changed: 32 additions & 16 deletions
Original file line numberDiff line numberDiff line change
@@ -90,7 +90,8 @@
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"aa_start": 1,
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"aa_end": 180,
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"color": "rgb(128,0,128)",
93-
"protein_alias": "nsp1"
93+
"protein_alias": "nsp1",
94+
"pokay_id": "nsp1"
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},
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"nsp2": {
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"type": "mature_protein_region_of_CDS",
@@ -105,7 +106,8 @@
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"aa_start": 181,
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"aa_end": 818,
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"color": "rgb(128,0,128)",
108-
"protein_alias": "nsp2"
109+
"protein_alias": "nsp2",
110+
"pokay_id": "nsp2"
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},
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"PL_pro": {
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"type": "mature_protein_region_of_CDS",
@@ -120,7 +122,8 @@
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"aa_start": 819,
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"aa_end": 2763,
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"color": "rgb(128,0,128)",
123-
"protein_alias": "PL_pro"
125+
"protein_alias": "PL_pro",
126+
"pokay_id": "PLpro"
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},
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"nsp4": {
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"type": "mature_protein_region_of_CDS",
@@ -135,7 +138,8 @@
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"aa_start": 2764,
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"aa_end": 3263,
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"color": "rgb(128,0,128)",
138-
"protein_alias": "nsp4"
141+
"protein_alias": "nsp4",
142+
"pokay_id": "nsp4"
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},
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"3CL": {
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"type": "mature_protein_region_of_CDS",
@@ -150,7 +154,8 @@
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"aa_start": 3264,
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"aa_end": 3569,
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"color": "rgb(128,0,128)",
153-
"protein_alias": "3CL"
157+
"protein_alias": "3CL",
158+
"pokay_id": "3CL"
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},
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"nsp6": {
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"type": "mature_protein_region_of_CDS",
@@ -165,7 +170,8 @@
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"aa_start": 3570,
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"aa_end": 3859,
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"color": "rgb(128,0,128)",
168-
"protein_alias": "nsp6"
173+
"protein_alias": "nsp6",
174+
"pokay_id": "nsp6"
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},
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"nsp7": {
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"type": "mature_protein_region_of_CDS",
@@ -180,7 +186,8 @@
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"aa_start": 3860,
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"aa_end": 3942,
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"color": "rgb(128,0,128)",
183-
"protein_alias": "nsp7"
189+
"protein_alias": "nsp7",
190+
"pokay_id": "nsp7"
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},
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"nsp8": {
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"type": "mature_protein_region_of_CDS",
@@ -195,7 +202,8 @@
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"aa_start": 3943,
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"aa_end": 4140,
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"color": "rgb(128,0,128)",
198-
"protein_alias": "nsp8"
205+
"protein_alias": "nsp8",
206+
"pokay_id": "nsp8"
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},
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"nsp9": {
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"type": "mature_protein_region_of_CDS",
@@ -210,7 +218,8 @@
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"aa_start": 4141,
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"aa_end": 4253,
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"color": "rgb(128,0,128)",
213-
"protein_alias": "nsp9"
221+
"protein_alias": "nsp9",
222+
"pokay_id": "nsp9"
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},
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"nsp10": {
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"type": "mature_protein_region_of_CDS",
@@ -240,7 +249,8 @@
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"aa_start": 4393,
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"aa_end": 5324,
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"color": "rgb(128,0,128)",
243-
"protein_alias": "RdRp"
252+
"protein_alias": "RdRp",
253+
"pokay_id": "RdRp"
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},
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"nsp13": {
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"type": "mature_protein_region_of_CDS",
@@ -358,7 +368,8 @@
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"aa_start": 1,
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"aa_end": 1273,
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"color": "rgb(142, 188, 102)",
361-
"protein_alias": "S"
371+
"protein_alias": "S",
372+
"pokay_id": "S"
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},
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"gene-GU280_gp03": {
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"type": "gene",
@@ -388,7 +399,8 @@
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"aa_start": 1,
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"aa_end": 275,
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"color": "rgb(229, 150, 55)",
391-
"protein_alias": "ORF3a"
402+
"protein_alias": "ORF3a",
403+
"pokay_id": "ORF3a"
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},
393405
"gene-GU280_gp04": {
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"type": "gene",
@@ -419,7 +431,8 @@
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"aa_start": 1,
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"aa_end": 75,
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"color": "rgb(170, 189, 82)",
422-
"protein_alias": "E"
434+
"protein_alias": "E",
435+
"pokay_id": "E"
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},
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"gene-GU280_gp05": {
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"type": "gene",
@@ -450,7 +463,8 @@
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"aa_start": 1,
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"aa_end": 222,
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"color": "rgb(223, 67, 39)",
453-
"protein_alias": "M"
466+
"protein_alias": "M",
467+
"pokay_id": "M"
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},
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"gene-GU280_gp06": {
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"type": "gene",
@@ -480,7 +494,8 @@
480494
"aa_start": 1,
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"aa_end": 61,
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"color": "rgb(196, 185, 69)",
483-
"protein_alias": "ORF6"
497+
"protein_alias": "ORF6",
498+
"pokay_id": "ORF6"
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},
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"gene-GU280_gp07": {
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"type": "gene",
@@ -601,7 +616,8 @@
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"aa_start": 1,
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"aa_end": 419,
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"color": "rgb(80, 151, 186)",
604-
"protein_alias": "N"
619+
"protein_alias": "N",
620+
"pokay_id": "N"
605621
},
606622
"gene-GU280_gp11": {
607623
"type": "gene",

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