thesis.tex

\documentclass[english,12pt,a4paper,pdftex,sci,utf8]{./styles/aaltothesis}
\usepackage{graphicx}
\usepackage{ifpdf}
\ifpdf
   % put here packages only for the PDF:
   \DeclareGraphicsExtensions{.pdf,.png,.jpg,.mps}
   \usepackage{hyperref}
\else
   % put here packages only for the DVI:
\fi

% put all the other packages here:
\usepackage{./styles/clemens_thesis}

% \includeonly{./tex/preamble, ./tex/background }

% Load Glossary and Acronyms
\include{./tex/_glossary}

\begin{document}

\include{./tex/preamble}

\listoftodos

% \maketitle
%\tableofcontents
%\listoffigures
%\listoftables

%% Content
\include{./tex/introduction}
\include{./tex/exploration}
\include{./tex/problem_def}
\include{./tex/methods}
\include{./tex/exp_results}
\include{./tex/discussion}
\include{./tex/conclusions}

%% Bibliography
\clearpage
%% The \phantomsection command is nessesary for hyperref to jump to the
%% correct page, in other words it puts a hyper marker on the page.
\phantomsection
\addcontentsline{toc}{section}{\refname}
%\addcontentsline{toc}{section}{References}
\bibliography{literature/thesis.bib}
\bibliographystyle{apalike}
%\nocite{*}

%% Glossary and Acronyms

\clearpage

\glossarystyle{super}
\setlength{\glsdescwidth}{0.8\textwidth}
\renewcommand*{\arraystretch}{1.5}% default is 1
\renewcommand{\glsnamefont}[1]{\textbf{#1}}
\printglossary[type=\acronymtype]

\clearpage
\glossarystyle{altlist}
\renewcommand*{\arraystretch}{1}% default is 1
\printglossary[type=main]

%% Appendix

\include{./tex/appendix}

% \glsaddall % add all glossary entries, even if not used.
% \glsaddallunused % add all unused glossary entries

\end{document}