Apply a binary closing to the input image by calling n dilations and n erosions subsequently.
Availability: Available in Fiji by activating the update sites clij and clij2. This function is part of clij2_-2.5.0.1.jar.
Ext.CLIJ2_closingDiamond(Image input, Image destination, Number number_of_dilations_and_erotions);
Java
// init CLIJ and GPU import net.haesleinhuepf.clij2.CLIJ2; import net.haesleinhuepf.clij.clearcl.ClearCLBuffer; CLIJ2 clij2 = CLIJ2.getInstance();// get input parameters ClearCLBuffer input = clij2.push(inputImagePlus); destination = clij2.create(input); int number_of_dilations_and_erotions = 10;
// Execute operation on GPU clij2.closingDiamond(input, destination, number_of_dilations_and_erotions);
// show result destinationImagePlus = clij2.pull(destination); destinationImagePlus.show(); // cleanup memory on GPU clij2.release(input); clij2.release(destination);
Matlab
% init CLIJ and GPU clij2 = init_clatlab();% get input parameters input = clij2.pushMat(input_matrix); destination = clij2.create(input); number_of_dilations_and_erotions = 10;
% Execute operation on GPU clij2.closingDiamond(input, destination, number_of_dilations_and_erotions);
% show result destination = clij2.pullMat(destination) % cleanup memory on GPU clij2.release(input); clij2.release(destination);
Icy JavaScript
// init CLIJ and GPU importClass(net.haesleinhuepf.clicy.CLICY); importClass(Packages.icy.main.Icy);clij2 = CLICY.getInstance();
// get input parameters input_sequence = getSequence(); input = clij2.pushSequence(input_sequence); destination = clij2.create(input); number_of_dilations_and_erotions = 10;
// Execute operation on GPU clij2.closingDiamond(input, destination, number_of_dilations_and_erotions);
// show result destination_sequence = clij2.pullSequence(destination) Icy.addSequence(destination_sequence); // cleanup memory on GPU clij2.release(input); clij2.release(destination);