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04_RESPONSE.Rnw
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04_RESPONSE.Rnw
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%% TUMOR RESPONSE - BEGIN
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\clearpage
\newpage
\section{Tumor Response}
<<results='asis'>>=
ADRS2$AVALC2 <- ADRS2$AVALC
label(ADRS2$AVALC2) <- "Objective Tumor Response Rate"
s6 <- summary(AGEGR1 ~ AVALC2, data = ADRS2, method = 'reverse',
overall = TRUE, test = TRUE, na.include = FALSE, continuous = 8)
latex(s6, npct = "both", landscape = FALSE, long = TRUE, prmsd = TRUE, here = TRUE,
prtest = "P", dotchart = FALSE,
caption = "Objective Tumor Response Rate - (SD, PD, Missing counted as Non Responder)", caption.loc = "top",
middle.bold = TRUE, file = "", digits = 2, exclude1 = FALSE, label = "RESP1")
@
<<results='asis', echo=TRUE>>=
ADRS1$AVALC2 <- ADRS1$AVALC
label(ADRS1$AVALC2) <- "Best Overall Response"
s6 <- summary(AGEGR1 ~ AVALC2, data = ADRS1, method = 'reverse',
overall = TRUE, test = FALSE, na.include = FALSE, continuous = 8)
latex(s6, npct = "both", landscape = FALSE, long = TRUE, prmsd = TRUE, here = TRUE,
prtest = "P", dotchart = FALSE,
caption = "Best Overall Response", caption.loc = "top",
middle.bold = TRUE, file = "", digits = 2, exclude1 = FALSE, label = "RESP2")
@
<<results='asis', echo=TRUE>>=
BiFreqCI(ADRS2$AVALC2, cap = "Objective Tumor Response Rate (95\\% Wilson Score CIs w/o cont. corr.)")
BiFreqCI(ADRS1$AVALC2, cap = "Best Overall Response (95\\% Wilson Score Interval w/o cont. corr.)")
@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%% TUMOR RESPONSE - END
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%