From e057bb5d2ca8092b88fb52de740e1ec68268096f Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Cl=C3=A9mence=20R=C3=A9da?= Date: Thu, 16 May 2024 11:14:11 +0000 Subject: [PATCH] gt bioss notebooks --- src/NORDic/UTILS/STRING_utils.py | 3 --- 1 file changed, 3 deletions(-) diff --git a/src/NORDic/UTILS/STRING_utils.py b/src/NORDic/UTILS/STRING_utils.py index 0fa6200..0183bb7 100755 --- a/src/NORDic/UTILS/STRING_utils.py +++ b/src/NORDic/UTILS/STRING_utils.py @@ -78,9 +78,6 @@ def get_protein_names_from_STRING(gene_list, taxon_id, app_name=None, version="1 if ("Error" in res_df.columns): print(" Error from STRING: %s" % str(res_df["ErrorMessage"])) return None - print(gene_list[:5]) - print(len(gene_list)) - print(res_df.columns) return res_df[["queryItem", "stringId", "preferredName", "annotation"]] def get_image_from_STRING(my_genes, taxon_id, file_name="network.png", min_score=0, network_flavor="evidence", network_type="functional", app_name=None, version="11.5", quiet=False):