From 92a75429fd57bcd5aebdefa7165590a284e240aa Mon Sep 17 00:00:00 2001 From: "Colby T. Ford" Date: Wed, 11 Dec 2024 13:12:25 -0500 Subject: [PATCH] Update README.md --- README.md | 12 ++++++++---- 1 file changed, 8 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 7c82f2b..d959cdc 100644 --- a/README.md +++ b/README.md @@ -1,9 +1,9 @@ # PyMOLfold Plugin for folding sequences directly in PyMOL using EvolutionaryScale's ESM3 model. -

Colby T. Ford, Ph.D. | Tuple, LLC

+

Colby T. Ford, Ph.D.

-![Plugin Screenshot](screenshot.png) +![Plugin Screenshot](img/screenshot_v0.1.0.png) ## Plugin Installation @@ -37,6 +37,8 @@ Then, to run a command in your normal terminal, simply point to the PyMOL Python Here are the example install commands for the supported models: - ESM3: `pip install esm` +- Boltz-1: `pip install boltz` +- Chai-1: `pip install chai_lab==0.5.0` > [!NOTE] > Note: To use an ESM3 model, you'll need an API key from [Evolutionary Scale Forge](https://forge.evolutionaryscale.ai/). Otherwise, the plugin can't download the folding model. @@ -44,7 +46,9 @@ Here are the example install commands for the supported models: ## Feature Roadmap -- [X] Basic folding with `esm3-small-2024-08` +- [X] Basic folding with `esm3-small-2024-08`. +- [X] Support for the latest ESM3 models. +- [ ] Addiional model support for Boltz-1 and Chai-1 (in beta) - [ ] UI controls for temperature and steps. - [ ] Support for multiple chains (or FASTA input format). -- [ ] UI Dropdown to select different models. +- [ ] UI Dropdown to select different models. \ No newline at end of file