From 1a3b0ccfb0f7ff1d182b4b42aa5060e21c3f2a51 Mon Sep 17 00:00:00 2001 From: Remi Gau Date: Thu, 9 Jan 2025 18:41:00 +0100 Subject: [PATCH 1/2] update octave install for ubuntu 24.04 --- .github/workflows/run_tests_cli.yml | 4 ++-- .github/workflows/tests_octave.yml | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/run_tests_cli.yml b/.github/workflows/run_tests_cli.yml index e9ddb3e6..5a6bdd15 100644 --- a/.github/workflows/run_tests_cli.yml +++ b/.github/workflows/run_tests_cli.yml @@ -22,7 +22,7 @@ jobs: - name: Install dependencies run: | sudo apt-get -y -qq update - sudo apt-get -y install octave liboctave-dev + sudo apt-get -y install octave octave-dev - name: Info run: octave --version - name: Install Deno @@ -94,7 +94,7 @@ jobs: sudo apt-get -y -qq update sudo apt-get -y install \ octave \ - liboctave-dev\ + octave-dev\ octave-common \ octave-io \ octave-image \ diff --git a/.github/workflows/tests_octave.yml b/.github/workflows/tests_octave.yml index 4c6ef792..c745f774 100644 --- a/.github/workflows/tests_octave.yml +++ b/.github/workflows/tests_octave.yml @@ -120,7 +120,7 @@ jobs: sudo apt-get -y -qq update sudo apt-get -y install \ octave \ - liboctave-dev\ + octave-dev\ octave-common \ octave-io \ octave-image \ From 7452cdb73bd91a386814ced1b5210dfa64ff902b Mon Sep 17 00:00:00 2001 From: Remi Gau Date: Fri, 10 Jan 2025 11:19:12 +0100 Subject: [PATCH 2/2] update git config --- .github/workflows/run_tests_cli.yml | 9 +++++++-- .github/workflows/run_tests_notebooks.yml | 2 +- .github/workflows/tests.yml | 15 +++++++++++++++ .github/workflows/tests_octave.yml | 5 +++++ 4 files changed, 28 insertions(+), 3 deletions(-) diff --git a/.github/workflows/run_tests_cli.yml b/.github/workflows/run_tests_cli.yml index 5a6bdd15..5bea6d20 100644 --- a/.github/workflows/run_tests_cli.yml +++ b/.github/workflows/run_tests_cli.yml @@ -12,7 +12,7 @@ on: jobs: tests_cli: - runs-on: ubuntu-22.04 + runs-on: ubuntu-latest if: github.repository_owner == 'cpp-lln-lab' strategy: fail-fast: false @@ -56,7 +56,7 @@ jobs: # fail_ci_if_error: false boutiques: - runs-on: ubuntu-22.04 + runs-on: ubuntu-latest if: github.repository_owner == 'cpp-lln-lab' steps: - name: Clone bidspm @@ -82,6 +82,11 @@ jobs: python -m pip install --upgrade pip setuptools pip install datalad + - name: Post-install + run: | + git config --global --add user.name "Ford Escort" + git config --global --add user.email 42@H2G2.com + - name: Get data run: | cd demos/openneuro/ diff --git a/.github/workflows/run_tests_notebooks.yml b/.github/workflows/run_tests_notebooks.yml index 3ce0e880..32f2b38d 100644 --- a/.github/workflows/run_tests_notebooks.yml +++ b/.github/workflows/run_tests_notebooks.yml @@ -21,7 +21,7 @@ jobs: # only trigger update on upstream repo if: github.repository_owner == 'cpp-lln-lab' - runs-on: ubuntu-22.04 + runs-on: ubuntu-latest steps: - name: Install dependencies diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index cc7c8209..bd7f7b7f 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -85,6 +85,11 @@ jobs: unzip download mv moae_fmriprep fmriprep + - name: Post-install + run: | + git config --global --add user.name "Ford Escort" + git config --global --add user.email 42@H2G2.com + - name: Get data for testing QA if: matrix.os == 'ubuntu-latest' run: | @@ -175,6 +180,11 @@ jobs: unzip download mv moae_fmriprep fmriprep + - name: Post-install + run: | + git config --global --add user.name "Ford Escort" + git config --global --add user.email 42@H2G2.com + - name: Get data for testing QA if: matrix.os == 'ubuntu-latest' run: | @@ -274,6 +284,11 @@ jobs: unzip download mv moae_fmriprep fmriprep + - name: Post-install + run: | + git config --global --add user.name "Ford Escort" + git config --global --add user.email 42@H2G2.com + - name: Prepare test data unix run: | cd tests diff --git a/.github/workflows/tests_octave.yml b/.github/workflows/tests_octave.yml index c745f774..ba9627db 100644 --- a/.github/workflows/tests_octave.yml +++ b/.github/workflows/tests_octave.yml @@ -99,6 +99,11 @@ jobs: unzip download mv moae_fmriprep fmriprep + - name: Post-install + run: | + git config --global --add user.name "Ford Escort" + git config --global --add user.email 42@H2G2.com + - name: Get data for testing QA run: | cd demos/openneuro/