pypi workflow added

Author: tomciardi

.github/workflows/publish.yml

@@ -0,0 +1,32 @@
+name: Upload Python Package to PyPI when a Release is Created
+
+on:
+  release:
+    types: [created]
+
+jobs:
+  pypi-publish:
+    name: Publish release to PyPI
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/pointextract
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.x"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install setuptools wheel
+      - name: Build package
+        run: |
+          python setup.py sdist bdist_wheel  # Could also be python -m build
+      - name: Publish package distributions to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          password: ${{ secrets.PYPI_API_TOKEN }}

README.md

@@ -4,7 +4,7 @@ Polar to cartesian transforms using annular point sampling
 Designed to unwrap 2D cross section images of 3D X-ray computed tomography scans.
 The topological transformation enables the surface of a circular or elliptical object to be aligned for downsteam analysis.
 
-<img src="./docs/workflow.png" width="800">
+<img src="./docs/workflow.png" width="700">
 
 ## Installation
 
@@ -34,6 +34,6 @@ This package is still in early development. Please feel free to post to the GitH
 ## Acknowledgements
 This material is based upon research in the Materials Data Science for Stockpile Stewardship Center of Excellence (MDS3-COE).
 
-[Case Western Reserve University, SDLElab] [1]
+<cite> [Case Western Reserve University, SDLElab] [1]</cite>
 
 [1]: http://sdle.case.edu

docs/index.md

@@ -5,7 +5,7 @@ Polar to cartesian transforms using annular point sampling.
 Designed to unwrap 2D cross section images of 3D X-ray computed tomography scans.
 The topological transformation enables the surface of a circular or elliptical object to be aligned for downsteam analysis.
 
-![](workflow.png)
+<img src="workflow.png" width="700">
 
 ## Installation
 

pointextract/__init__.py

@@ -1 +1 @@
-from .main import ellipse_detect, unwrap_image
+from .main import *

pyproject.toml

@@ -1,42 +1,34 @@
 [build-system]
-requires = ["setuptools >= 61.0"]
+requires = ["setuptools>=64", "setuptools_scm>=8"]
 build-backend = "setuptools.build_meta"
 
 [project]
 name = 'pointextract'
-version = "0.1"
-description = "Polar to cartesian transforms using circular and elliptical point sampling."
-
+dynamic = ["version"]
+authors = [
+  {name = "Thomas Ciardi", email = "thomas.ciardi@case.edu"},
+  {name = "Roger H. French", email = "rxf131@case.edu"},
+]
+description = "Polar to cartesian transforms using annular point sampling."
 readme = "README.md"
 requires-python = ">=3.9"
 dependencies = [
     'numpy',
     'scikit-image',
 ]
-
 license = {file = "LICENSE"}
-
 classifiers = [
-    'Development Status :: 4 - Beta',
+    'Programming Language :: Python :: 3',
     'License :: OSI Approved :: BSD License',
     'Operating System :: OS Independent',
-    'Intended Audience :: Science/Research',
-    'Programming Language :: Python',
-    'Programming Language :: Python :: 3',
-    'Topic :: Scientific/Engineering',
-]
-
-authors = [
-  {name = "Thomas Ciardi", email = "thomas.ciardi@case.edu"},
-  {name = "Roger H. French", email = "rxf131@case.edu"},
 ]
 
 [project.optional-dependencies]
 test = ["pytest"]
 
 [project.urls]
-"Bug Tracker" = "https://github.com/cwru-sdle/pointextract/issues"
 "Source Code" = "https://github.com/cwru-sdle/pointextract"
+"Bug Tracker" = "https://github.com/cwru-sdle/pointextract/issues"
 
 [tool.setuptools.packages.find]
 include = ["pointextract*"]

requirements.txt

@@ -1,2 +1,2 @@
-numpy==2.1.2
-scikit-image==0.24.0
+numpy
+scikit-image