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VirusGenBankIDs.txt
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VirusGenBankIDs.txt
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% HRV GENEBANK Access Numbers
% http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923423/#SD1
data={'FJ445111' 'HRV-A/hrv-01';
'FJ445176' 'HRV-A/hrv-07';
'FJ445113' 'HRV-A/hrv-08';
'FJ445177' 'HRV-A/hrv-09';
'FJ445114' 'HRV-A/hrv-09f01';
'FJ445115' 'HRV-A/hrv-09f02';
'FJ445178' 'HRV-A/hrv-10';
'EF173414' 'HRV-A/hrv-11';
'EF173415' 'HRV-A/hrv-12';
'FJ445116' 'HRV-A/hrv-13';
'FJ445117' 'HRV-A/hrv-14';
'DQ473493' 'HRV-A/hrv-15';
'L24917' 'HRV-A/hrv-16';
'FJ445118' 'HRV-A/hrv-18';
'FJ445119' 'HRV-A/hrv-19';
'FJ445120' 'HRV-A/hrv-20';
'FJ445121' 'HRV-A/hrv-21';
'FJ445122' 'HRV-A/hrv-22';
'DQ473497' 'HRV-A/hrv-23';
'FJ445190' 'HRV-A/hrv-24';
'FJ445123' 'HRV-A/hrv-25';
'DQ473508' 'HRV-A/hrv-28';
'FJ445125' 'HRV-A/hrv-29';
'FJ445179' 'HRV-A/hrv-30';
'FJ445126' 'HRV-A/hrv-31';
'FJ445127' 'HRV-A/hrv-32';
'FJ445128' 'HRV-A/hrv-33';
'FJ445189' 'HRV-A/hrv-34';
'DQ473505' 'HRV-A/hrv-36';
'FJ445180' 'HRV-A/hrv-38';
'AY751783' 'HRV-A/hrv-39';
'FJ445129' 'HRV-A/hrv-40';
'FJ445131' 'HRV-A/hrv-43';
'FJ445132' 'HRV-A/hrv-45';
'DQ473491' 'HRV-A/hrv-41';
'DQ473499' 'HRV-A/hrv-44';
'DQ473506' 'HRV-A/hrv-46';
'DQ473496' 'HRV-A/hrv-49';
'FJ445134' 'HRV-A/hrv-hrv-49-f04';
'FJ445135' 'HRV-A/hrv-50';
'FJ445136' 'HRV-A/hrv-51';
'DQ473507' 'HRV-A/hrv-53';
'FJ445138' 'HRV-A/hrv-54';
'FJ445139' 'HRV-A/hrv-54-f05';
'DQ473511' 'HRV-A/hrv-55';
'FJ445140' 'HRV-A/hrv-56';
'FJ445160' 'HRV-A/hrv-82';
'DQ473485' 'HRV-B/hrv-03';
'DQ473490' 'HRV-B/hrv-04';
'FJ445112' 'HRV-B/hrv-05';
'DQ473486' 'HRV-B/hrv-06';
'L05355' 'HRV-B/hrv-14';
'EF173420' 'HRV-B/hrv-17';
'FJ445124' 'HRV-B/hrv-26';
'FJ445186' 'HRV-B/hrv-27';
'FJ445187' 'HRV-B/hrv-35';
'EF173423' 'HRV-B/hrv-37';
'FJ445130' 'HRV-B/hrv-42';
'DQ473488' 'HRV-B/hrv-48';
'FJ445137' 'HRV-B/hrv-52-f10';
'FJ445151' 'HRV-B/hrv-69';
'DQ473489' 'HRV-B/hrv-70';
'FJ445153' 'HRV-B/hrv-72';
'FJ445155' 'HRV-B/hrv-79';
'FJ445161' 'HRV-B/hrv-83';
'FJ445162' 'HRV-B/hrv-84';
'FJ445164' 'HRV-B/hrv-86';
'FJ445168' 'HRV-B/hrv-91';
'FJ445169' 'HRV-B/hrv-92' ;
'EF173425' 'HRV-B/hrv-93';
'FJ445172' 'HRV-B/hrv-97';
'FJ445174' 'HRV-B/hrv-99';
'AF499637' 'HEV-C/cva-13';
'AF546702' 'HEV-C/cva-21';
'V01149' 'HEV-C/pv-1m';
'EF186077' 'HRV-C/qpm';
'EF582385' 'HRV-C/c024';
'EF077280' 'HRV-C/Nat045';
'EF582387' 'HRV-C/c025';
'EF582386' 'HRV-C/c026';
};
% Avian Flu Virus GENEBANK Access Numbers
%http://www.ncbi.nlm.nih.gov/genomes/FLU/Database/nph-select.cgi?go=database
%Example:%KF297317 Influenza A virus (chicken/Rizhao/719b/2013(H7N9)) segment 6 neuraminidase (NA) gene, complete cds
data={'KC891137' 'A/Illinois/05/2012(H1N1)';
'KC891134' 'A/Illinois/06/2012(H1N1)';
'KC891128' 'A/Illinois/08/2012(H1N1)';
'KC891564' 'A/Illinois/01/2012(H1N1)';
'KC891131' 'A/Illinois/07/2012(H1N1)';
'KC893127' 'A/Illinois/13/2012(H3N2)';
'KC893131' 'A/Illinois/12/2012(H3N2)';
'DQ017515' 'A/mallard/Albert24/01(H7N3)';
'CY094463' 'A/winged-teal/Californi11275/2008(H7N3)';
'CY039542' 'A/winged-teal/CaliforniAKS1370/2008(H7N3)';
'CY094575' 'A/winged-teal/Californi1841/2009(H7N3)';
'CY135723' 'A/mallard/Alask10BM05347R0/2010(H7N3)';
'CY135821' 'A/mallard/Alask10BM05860R0/2010(H7N3)';
'CY135965' 'A/mallard/Alask10BM06838R0/2010(H7N3)';
'CY135997' 'A/mallard/Alask10BM06905R0/2010(H7N3)';
'CY060664' 'A/Ontario/315015/2009(H1N1)';
'JF789604' 'A/mallard/CzechRepublic/13438-29K/2010(H11N9)';
'GQ184333' 'A/Baikal-teal/Hongze/14/2005(H11N9)';
'KF021599' 'A/Shanghai/02/2013(H7N9)';
'KC885958' 'A/Zhejiang/DTID-ZJU01/2013(H7N9)';
'KC994454' 'A/Fujian/1/2013(H7N9))';
'KC853765' 'A/Hangzhou/1/2013(H7N9)';
'KF001514' 'A/Hangzhou/2/2013(H7N9)';
'KF001517' 'A/Hangzhou/3/2013(H7N9)';
'KC896776' 'A/Nanjing/1/2013(H7N9)';
'KF278746' 'A/Jiangsu/1/2013(H7N9)';
'KC853231' 'A/Shanghai/4664T/2013(H7N9)';
'KF018055' 'A/Taiwan/T02081/2013(H7N9)';
'KF018047' 'A/Taiwan/S02076/2013(H7N9)';
'CY147062' 'A/duck/Anhui/SC702/2013(H7N9)';
'CY147070' 'A/duck/Zhejiang/SC410/2013(H7N9)';
'KF732006' 'A/Zhejiang/DTID-ZJU10/2013(H7N9)';
'KF259731' 'A/chicken/Rizhao/867/2013(H7N9)';
'CY146910' 'A/chicken/Guangdong/SD641/2013(H7N9)';
'KF768179' 'A/chicken/Zhejiang/PA-DTID-ZJU01/2013(H7N9)';
'KF055467' 'A/Zhejiang/HZ1/2013(H7N9)';
'JN244222' 'A/wild-bird/KoreA14/2011(H7N9)';
'KF297317' 'A/chicken/Rizhao/719b/2013(H7N9)';
'KF259730' 'A/chicken/Rizhao/515/2013(H7N9)';
'KF150610' 'A/environment/Wuxi/1/2013(H7N9)';
'KF034921' 'A/Wuxi/2/2013(H7N9)';
'KF034913' 'A/Wuxi/1/2013(H7N9)';
'KF420298' 'A/Changsh1/2013(H7N9)';
'CY029883' 'A/tailed-sandpiper/Australi10/2004(H11N9)';
'AB298284' 'A/duck/Hokkaido/W245/2004(H11N9)';
'AB472035' 'A/duck/Tsukub239/2005(H11N9)';
'CY025199' 'A/tailed-sandpiper/Australi6/2004(H11N9)';
'AB472034' 'A/duck/Tsukub164/2005(H11N9)';
'AB472033' 'A/duck/Tsukub441/2005(H11N9)';
'KF572435' 'A/wild-bird/HongKong/07035-1/2011(H5N1)';
'KF735645' 'A/barn-swallow/HongKong/1161/2010(H5N1)';
'AB557634' 'A/magpie-robin/HongKong/9298/2009(H5N1)';
};