000055/BruntonLab/peterson21/Table_coarse_labels.ipynb

{
 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# Print tables of coarse label durations across participants"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Returns pandas dataframe of durations for activity (blocklist_labels=False) and blocklist (blocklist_labels=True) labels."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "%pip install -r requirements.txt"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "from plot_utils import clabel_table_create"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "## Count activity and blocklist coarse label durations for each participant"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Sleep/rest</th>\n",
       "      <th>Inactive</th>\n",
       "      <th>Talk</th>\n",
       "      <th>TV</th>\n",
       "      <th>Computer/phone</th>\n",
       "      <th>Eat</th>\n",
       "      <th>Other activity</th>\n",
       "      <th>Total</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>P01</th>\n",
       "      <td>29.2</td>\n",
       "      <td>1.9</td>\n",
       "      <td>15.6</td>\n",
       "      <td>22.0</td>\n",
       "      <td>7.8</td>\n",
       "      <td>2.6</td>\n",
       "      <td>0.8</td>\n",
       "      <td>75.7</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P02</th>\n",
       "      <td>53.2</td>\n",
       "      <td>2.1</td>\n",
       "      <td>9.2</td>\n",
       "      <td>7.7</td>\n",
       "      <td>2.9</td>\n",
       "      <td>2.1</td>\n",
       "      <td>4.8</td>\n",
       "      <td>79.8</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P03</th>\n",
       "      <td>11.9</td>\n",
       "      <td>0.3</td>\n",
       "      <td>21.8</td>\n",
       "      <td>1.9</td>\n",
       "      <td>19.8</td>\n",
       "      <td>3.5</td>\n",
       "      <td>0.9</td>\n",
       "      <td>51.1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P04</th>\n",
       "      <td>34.0</td>\n",
       "      <td>3.1</td>\n",
       "      <td>28.3</td>\n",
       "      <td>11.0</td>\n",
       "      <td>8.2</td>\n",
       "      <td>2.0</td>\n",
       "      <td>1.2</td>\n",
       "      <td>78.9</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P05</th>\n",
       "      <td>35.4</td>\n",
       "      <td>2.8</td>\n",
       "      <td>8.9</td>\n",
       "      <td>12.1</td>\n",
       "      <td>5.8</td>\n",
       "      <td>1.0</td>\n",
       "      <td>1.2</td>\n",
       "      <td>62.5</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P06</th>\n",
       "      <td>37.8</td>\n",
       "      <td>0.1</td>\n",
       "      <td>2.8</td>\n",
       "      <td>5.7</td>\n",
       "      <td>2.6</td>\n",
       "      <td>0.3</td>\n",
       "      <td>0.2</td>\n",
       "      <td>45.3</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P07</th>\n",
       "      <td>46.8</td>\n",
       "      <td>0.3</td>\n",
       "      <td>5.0</td>\n",
       "      <td>0.3</td>\n",
       "      <td>1.9</td>\n",
       "      <td>0.4</td>\n",
       "      <td>0.2</td>\n",
       "      <td>53.6</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P08</th>\n",
       "      <td>47.8</td>\n",
       "      <td>0.8</td>\n",
       "      <td>6.8</td>\n",
       "      <td>5.3</td>\n",
       "      <td>1.3</td>\n",
       "      <td>0.6</td>\n",
       "      <td>2.2</td>\n",
       "      <td>61.8</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P09</th>\n",
       "      <td>87.3</td>\n",
       "      <td>8.1</td>\n",
       "      <td>3.8</td>\n",
       "      <td>0.0</td>\n",
       "      <td>0.0</td>\n",
       "      <td>0.6</td>\n",
       "      <td>1.9</td>\n",
       "      <td>100.6</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P10</th>\n",
       "      <td>67.5</td>\n",
       "      <td>2.1</td>\n",
       "      <td>5.8</td>\n",
       "      <td>0.1</td>\n",
       "      <td>5.6</td>\n",
       "      <td>0.0</td>\n",
       "      <td>1.8</td>\n",
       "      <td>81.4</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P11</th>\n",
       "      <td>36.0</td>\n",
       "      <td>1.4</td>\n",
       "      <td>6.6</td>\n",
       "      <td>0.0</td>\n",
       "      <td>0.1</td>\n",
       "      <td>0.0</td>\n",
       "      <td>0.8</td>\n",
       "      <td>44.9</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>P12</th>\n",
       "      <td>32.4</td>\n",
       "      <td>0.3</td>\n",
       "      <td>1.5</td>\n",
       "      <td>0.1</td>\n",
       "      <td>0.5</td>\n",
       "      <td>0.0</td>\n",
       "      <td>0.6</td>\n",
       "      <td>35.4</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "     Sleep/rest  Inactive  Talk    TV  Computer/phone  Eat  Other activity  \\\n",
       "P01        29.2       1.9  15.6  22.0             7.8  2.6             0.8   \n",
       "P02        53.2       2.1   9.2   7.7             2.9  2.1             4.8   \n",
       "P03        11.9       0.3  21.8   1.9            19.8  3.5             0.9   \n",
       "P04        34.0       3.1  28.3  11.0             8.2  2.0             1.2   \n",
       "P05        35.4       2.8   8.9  12.1             5.8  1.0             1.2   \n",
       "P06        37.8       0.1   2.8   5.7             2.6  0.3             0.2   \n",
       "P07        46.8       0.3   5.0   0.3             1.9  0.4             0.2   \n",
       "P08        47.8       0.8   6.8   5.3             1.3  0.6             2.2   \n",
       "P09        87.3       8.1   3.8   0.0             0.0  0.6             1.9   \n",
       "P10        67.5       2.1   5.8   0.1             5.6  0.0             1.8   \n",
       "P11        36.0       1.4   6.6   0.0             0.1  0.0             0.8   \n",
       "P12        32.4       0.3   1.5   0.1             0.5  0.0             0.6   \n",
       "\n",
       "     Total  \n",
       "P01   75.7  \n",
       "P02   79.8  \n",
       "P03   51.1  \n",
       "P04   78.9  \n",
       "P05   62.5  \n",
       "P06   45.3  \n",
       "P07   53.6  \n",
       "P08   61.8  \n",
       "P09  100.6  \n",
       "P10   81.4  \n",
       "P11   44.9  \n",
       "P12   35.4  "
      ]
     },
     "execution_count": 2,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "blocklist_labels = False  # show blocklist (True) or activity (False) label durations\n",
    "\n",
    "if blocklist_labels:\n",
    "    common_acts = [\n",
    "        'Blocklist (Data break)',\n",
    "        'Blocklist (Camera move/zoom)',\n",
    "        'Blocklist (Camera occluded)',\n",
    "        'Blocklist (Experiment)',\n",
    "        'Blocklist (Private time)',\n",
    "        'Blocklist (Tether/bandage)',\n",
    "        'Blocklist (Hands under blanket)',\n",
    "        'Blocklist (Clinical procedure)',\n",
    "    ]\n",
    "else:\n",
    "    common_acts = [\n",
    "        'Sleep/rest',\n",
    "        'Inactive',\n",
    "        'Talk',\n",
    "        'TV',\n",
    "        'Computer/phone',\n",
    "        'Eat',\n",
    "        'Other activity',\n",
    "    ]\n",
    "\n",
    "clabel_table_create(common_acts)"
   ]
  }
 ],
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