Using microbe directory two on custom table

[nksjpl]

I installed the Microbe directory 2 locally on my Linux system and want to achieve the following from it.
Give a phenotypic and ecologic description of microbial species parameters.
Annotate the microbiome where taxa have been identified.

I generated a test .csv that contains all the bacterial species from one of our samples. I am trying to give a genotypic phenotypic and ecologic description of microbial species parameters. How do I provide this file to microbe directory 2 and generate a file which contains all filled in details?

thanks for your help :)