DESCRIPTION

Package: JACUSA2helper
Type: Package
Title: Post-processing for JACUSA2 output
Version: 1.9.9.9675
Depends: R (>= 4.0)
Date: 2022-12-18
Authors@R: c(person("Michael", "Piechotta", email = "michael.piechotta@gmail.com", role = c("aut", "cre")),
         person("Qi", "Wang", role = c("ctb")),
         person("Christoph", "Dieterich", role = c("ctb")),
         person("Dieterich Lab", role = c("fnd")))
Description: This package enables post-processing of JACUSA2 output: read, filter, and plot.
URL: https://github.com/dieterich-lab/JACUSA2helper,
    https://dieterich-lab.github.io/JACUSA2helper/
BugReports: https://github.com/dieterich-lab/JACUSA2helper/issues
License: GPL-3 + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.2.1
LazyData: true
LazyDataCompression: bzip2
biocViews:
Imports: 
  curl,
  data.table,
  tibble,
  tidyr,
  dplyr, 
  magrittr,
  Rcpp,
  GenomicRanges,
  GenomeInfoDb,
  IRanges,
  plyranges,
  S4Vectors,
  NMF
Suggests: 
  stringr,
  ggplot2, 
  scales,
  Rsamtools,
  testthat (>= 2.1.0),
  knitr,
  VennDiagram,
  reshape2,
  rmarkdown,
  BSgenome,
  BSgenome.Hsapiens.NCBI.GRCh38
LinkingTo: Rcpp
VignetteBuilder: knitr