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Installation from GitHub fails #22

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CDieterich opened this issue Oct 23, 2023 · 1 comment
Open

Installation from GitHub fails #22

CDieterich opened this issue Oct 23, 2023 · 1 comment
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@CDieterich
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Die heruntergeladenen Quellpakete sind in
'/private/var/folders/ls/810nmc5n7r92n_cmzm4y8k400000gp/T/Rtmp9Zugvt/downloaded_packages'
checking for file '/private/var/folders/ls/810nmc5n7r92n_cmzm4y8k400000gp/T/Rtmp9Zugvt/remotesf946ad86073/dieterich-lab-JACUSA2helper-1b2e9b4/DESCRIPTION' ..v checking for file '/private/var/folders/ls/810nmc5n7r92n_cmzm4y8k400000gp/T/Rtmp9Zugvt/remotesf946ad86073/dieterich-lab-JACUSA2helper-1b2e9b4/DESCRIPTION'

  • preparing 'JACUSA2helper':
    v checking DESCRIPTION meta-information ...
  • cleaning src
  • installing the package to build vignettes
    Fehler: Failed to install 'JACUSA2helper' from GitHub:
    lazy-load database '/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/prettyunits/R/prettyunits.rdb' is corrupt
    Zus"atzlich: Warnmeldung:
    In paste0(" (", pretty_dt(elapsed), ")") :
    internal error -3 in R_decompress1
@piechottam
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Solutions:

  1. Omit vignettes (takes very long to build) devtools::install_github("https://github.com/dieterich-lab/JACUSA2helper", build_vignettes = FALSE)
  2. Install pandoc in your environment (building vignettes should work now)

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