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Easybuild complains about rdma-core-dependencies even though they are present #818

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baloe opened this issue Aug 23, 2022 · 10 comments
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@baloe
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baloe commented Aug 23, 2022

I am trying to install a foss collection with the following command.

eb --prefix $PATH_MODULES -Dr foss-2020a.eb

but eb quits saying that

ERROR: Failed to process easyconfig /tmp/bastian/eb_tmp/easybuild/easyconfigs/u/UCX/UCX-1.8.0-GCCcore-9.3.0.eb: One or more OS dependencies were not found: [('libibverbs-dev', 'libibverbs-devel', 'rdma-core-devel')]

I did install those header files though, via

yay -S rdma-core

which installs the following files, including libibverbs objects:

pacman -Ql rdma-core
rdma-core /etc/
rdma-core /etc/infiniband-diags/
rdma-core /etc/infiniband-diags/error_thresholds
rdma-core /etc/infiniband-diags/ibdiag.conf
rdma-core /etc/iwpmd.conf
rdma-core /etc/libibverbs.d/
rdma-core /etc/libibverbs.d/bnxt_re.driver
rdma-core /etc/libibverbs.d/cxgb4.driver
rdma-core /etc/libibverbs.d/efa.driver
rdma-core /etc/libibverbs.d/hfi1verbs.driver
rdma-core /etc/libibverbs.d/hns.driver
rdma-core /etc/libibverbs.d/ipathverbs.driver
rdma-core /etc/libibverbs.d/irdma.driver
rdma-core /etc/libibverbs.d/mlx4.driver
rdma-core /etc/libibverbs.d/mlx5.driver
rdma-core /etc/libibverbs.d/mthca.driver
rdma-core /etc/libibverbs.d/ocrdma.driver
rdma-core /etc/libibverbs.d/qedr.driver
rdma-core /etc/libibverbs.d/rxe.driver
rdma-core /etc/libibverbs.d/siw.driver
rdma-core /etc/libibverbs.d/vmw_pvrdma.driver
rdma-core /etc/modprobe.d/
rdma-core /etc/modprobe.d/mlx4.conf
rdma-core /etc/modprobe.d/truescale.conf
rdma-core /etc/rdma/
rdma-core /etc/rdma/mlx4.conf
rdma-core /etc/rdma/modules/
rdma-core /etc/rdma/modules/infiniband.conf
rdma-core /etc/rdma/modules/iwarp.conf
rdma-core /etc/rdma/modules/iwpmd.conf
rdma-core /etc/rdma/modules/opa.conf
rdma-core /etc/rdma/modules/rdma.conf
rdma-core /etc/rdma/modules/roce.conf
rdma-core /etc/rdma/modules/srp_daemon.conf
rdma-core /etc/rdma/rdma.conf
rdma-core /etc/srp_daemon.conf
rdma-core /etc/udev/
rdma-core /etc/udev/rules.d/
rdma-core /etc/udev/rules.d/70-persistent-ipoib.rules
rdma-core /usr/
rdma-core /usr/bin/
rdma-core /usr/bin/check_lft_balance.pl
rdma-core /usr/bin/cmtime
rdma-core /usr/bin/dump_fts
rdma-core /usr/bin/dump_lfts.sh
rdma-core /usr/bin/dump_mfts.sh
rdma-core /usr/bin/ib_acme
rdma-core /usr/bin/ibacm
rdma-core /usr/bin/ibaddr
rdma-core /usr/bin/ibcacheedit
rdma-core /usr/bin/ibccconfig
rdma-core /usr/bin/ibccquery
rdma-core /usr/bin/ibfindnodesusing.pl
rdma-core /usr/bin/ibhosts
rdma-core /usr/bin/ibidsverify.pl
rdma-core /usr/bin/iblinkinfo
rdma-core /usr/bin/ibnetdiscover
rdma-core /usr/bin/ibnodes
rdma-core /usr/bin/ibping
rdma-core /usr/bin/ibportstate
rdma-core /usr/bin/ibqueryerrors
rdma-core /usr/bin/ibroute
rdma-core /usr/bin/ibrouters
rdma-core /usr/bin/ibsrpdm
rdma-core /usr/bin/ibstat
rdma-core /usr/bin/ibstatus
rdma-core /usr/bin/ibswitches
rdma-core /usr/bin/ibsysstat
rdma-core /usr/bin/ibtracert
rdma-core /usr/bin/ibv_asyncwatch
rdma-core /usr/bin/ibv_devices
rdma-core /usr/bin/ibv_devinfo
rdma-core /usr/bin/ibv_rc_pingpong
rdma-core /usr/bin/ibv_srq_pingpong
rdma-core /usr/bin/ibv_uc_pingpong
rdma-core /usr/bin/ibv_ud_pingpong
rdma-core /usr/bin/ibv_xsrq_pingpong
rdma-core /usr/bin/iwpmd
rdma-core /usr/bin/mckey
rdma-core /usr/bin/perfquery
rdma-core /usr/bin/rcopy
rdma-core /usr/bin/rdma-ndd
rdma-core /usr/bin/rdma_client
rdma-core /usr/bin/rdma_server
rdma-core /usr/bin/rdma_xclient
rdma-core /usr/bin/rdma_xserver
rdma-core /usr/bin/riostream
rdma-core /usr/bin/rping
rdma-core /usr/bin/rstream
rdma-core /usr/bin/run_srp_daemon
rdma-core /usr/bin/saquery
rdma-core /usr/bin/sminfo
rdma-core /usr/bin/smpdump
rdma-core /usr/bin/smpquery
rdma-core /usr/bin/srp_daemon
rdma-core /usr/bin/srp_daemon.sh
rdma-core /usr/bin/ucmatose
rdma-core /usr/bin/udaddy
rdma-core /usr/bin/udpong
rdma-core /usr/bin/vendstat
rdma-core /usr/include/
rdma-core /usr/include/infiniband/
rdma-core /usr/include/infiniband/acm.h
rdma-core /usr/include/infiniband/acm_prov.h
rdma-core /usr/include/infiniband/arch.h
rdma-core /usr/include/infiniband/efadv.h
rdma-core /usr/include/infiniband/ib.h
rdma-core /usr/include/infiniband/ib_user_ioctl_verbs.h
rdma-core /usr/include/infiniband/ibnetdisc.h
rdma-core /usr/include/infiniband/ibnetdisc_osd.h
rdma-core /usr/include/infiniband/mad.h
rdma-core /usr/include/infiniband/mad_osd.h
rdma-core /usr/include/infiniband/mlx4dv.h
rdma-core /usr/include/infiniband/mlx5_api.h
rdma-core /usr/include/infiniband/mlx5_user_ioctl_verbs.h
rdma-core /usr/include/infiniband/mlx5dv.h
rdma-core /usr/include/infiniband/opcode.h
rdma-core /usr/include/infiniband/sa-kern-abi.h
rdma-core /usr/include/infiniband/sa.h
rdma-core /usr/include/infiniband/tm_types.h
rdma-core /usr/include/infiniband/umad.h
rdma-core /usr/include/infiniband/umad_cm.h
rdma-core /usr/include/infiniband/umad_sa.h
rdma-core /usr/include/infiniband/umad_sa_mcm.h
rdma-core /usr/include/infiniband/umad_sm.h
rdma-core /usr/include/infiniband/umad_str.h
rdma-core /usr/include/infiniband/umad_types.h
rdma-core /usr/include/infiniband/verbs.h
rdma-core /usr/include/infiniband/verbs_api.h
rdma-core /usr/include/rdma/
rdma-core /usr/include/rdma/rdma_cma.h
rdma-core /usr/include/rdma/rdma_cma_abi.h
rdma-core /usr/include/rdma/rdma_verbs.h
rdma-core /usr/include/rdma/rsocket.h
rdma-core /usr/lib/
rdma-core /usr/lib/dracut/
rdma-core /usr/lib/dracut/modules.d/
rdma-core /usr/lib/dracut/modules.d/05rdma/
rdma-core /usr/lib/dracut/modules.d/05rdma/module-setup.sh
rdma-core /usr/lib/ibacm/
rdma-core /usr/lib/ibacm/libibacmp.so
rdma-core /usr/lib/libefa.so
rdma-core /usr/lib/libefa.so.1
rdma-core /usr/lib/libefa.so.1.1.41.0
rdma-core /usr/lib/libibmad.so
rdma-core /usr/lib/libibmad.so.5
rdma-core /usr/lib/libibmad.so.5.3.41.0
rdma-core /usr/lib/libibnetdisc.so
rdma-core /usr/lib/libibnetdisc.so.5
rdma-core /usr/lib/libibnetdisc.so.5.0.41.0
rdma-core /usr/lib/libibumad.so
rdma-core /usr/lib/libibumad.so.3
rdma-core /usr/lib/libibumad.so.3.2.41.0
rdma-core /usr/lib/libibverbs.so
rdma-core /usr/lib/libibverbs.so.1
rdma-core /usr/lib/libibverbs.so.1.14.41.0
rdma-core /usr/lib/libibverbs/
rdma-core /usr/lib/libibverbs/libbnxt_re-rdmav34.so
rdma-core /usr/lib/libibverbs/libcxgb4-rdmav34.so
rdma-core /usr/lib/libibverbs/libefa-rdmav34.so
rdma-core /usr/lib/libibverbs/libhfi1verbs-rdmav34.so
rdma-core /usr/lib/libibverbs/libhns-rdmav34.so
rdma-core /usr/lib/libibverbs/libipathverbs-rdmav34.so
rdma-core /usr/lib/libibverbs/libirdma-rdmav34.so
rdma-core /usr/lib/libibverbs/libmlx4-rdmav34.so
rdma-core /usr/lib/libibverbs/libmlx5-rdmav34.so
rdma-core /usr/lib/libibverbs/libmthca-rdmav34.so
rdma-core /usr/lib/libibverbs/libocrdma-rdmav34.so
rdma-core /usr/lib/libibverbs/libqedr-rdmav34.so
rdma-core /usr/lib/libibverbs/librxe-rdmav34.so
rdma-core /usr/lib/libibverbs/libsiw-rdmav34.so
rdma-core /usr/lib/libibverbs/libvmw_pvrdma-rdmav34.so
rdma-core /usr/lib/libmlx4.so
rdma-core /usr/lib/libmlx4.so.1
rdma-core /usr/lib/libmlx4.so.1.0.41.0
rdma-core /usr/lib/libmlx5.so
rdma-core /usr/lib/libmlx5.so.1
rdma-core /usr/lib/libmlx5.so.1.23.41.0
rdma-core /usr/lib/librdmacm.so
rdma-core /usr/lib/librdmacm.so.1
rdma-core /usr/lib/librdmacm.so.1.3.41.0
rdma-core /usr/lib/modprobe.d/
rdma-core /usr/lib/modprobe.d/libmlx4.conf
rdma-core /usr/lib/pkgconfig/
rdma-core /usr/lib/pkgconfig/libefa.pc
rdma-core /usr/lib/pkgconfig/libibmad.pc
rdma-core /usr/lib/pkgconfig/libibnetdisc.pc
rdma-core /usr/lib/pkgconfig/libibumad.pc
rdma-core /usr/lib/pkgconfig/libibverbs.pc
rdma-core /usr/lib/pkgconfig/libmlx4.pc
rdma-core /usr/lib/pkgconfig/libmlx5.pc
rdma-core /usr/lib/pkgconfig/librdmacm.pc
rdma-core /usr/lib/rdma/
rdma-core /usr/lib/rdma/mlx4-setup.sh
rdma-core /usr/lib/rdma/srp_daemon/
rdma-core /usr/lib/rdma/srp_daemon/start_on_all_ports
rdma-core /usr/lib/rdma/truescale-serdes.cmds
rdma-core /usr/lib/rsocket/
rdma-core /usr/lib/rsocket/librspreload.so
rdma-core /usr/lib/rsocket/librspreload.so.1
rdma-core /usr/lib/rsocket/librspreload.so.1.0.0
rdma-core /usr/lib/systemd/
rdma-core /usr/lib/systemd/system/
rdma-core /usr/lib/systemd/system/ibacm.service
rdma-core /usr/lib/systemd/system/ibacm.socket
rdma-core /usr/lib/systemd/system/iwpmd.service
rdma-core /usr/lib/systemd/system/rdma-hw.target
rdma-core /usr/lib/systemd/system/rdma-load-modules@.service
rdma-core /usr/lib/systemd/system/rdma-ndd.service
rdma-core /usr/lib/systemd/system/srp_daemon.service
rdma-core /usr/lib/systemd/system/srp_daemon_port@.service
rdma-core /usr/lib/udev/
rdma-core /usr/lib/udev/rdma_rename
rdma-core /usr/lib/udev/rules.d/
rdma-core /usr/lib/udev/rules.d/60-rdma-ndd.rules
rdma-core /usr/lib/udev/rules.d/60-rdma-persistent-naming.rules
rdma-core /usr/lib/udev/rules.d/60-srp_daemon.rules
rdma-core /usr/lib/udev/rules.d/75-rdma-description.rules
rdma-core /usr/lib/udev/rules.d/90-iwpmd.rules
rdma-core /usr/lib/udev/rules.d/90-rdma-hw-modules.rules
rdma-core /usr/lib/udev/rules.d/90-rdma-ulp-modules.rules
rdma-core /usr/lib/udev/rules.d/90-rdma-umad.rules
rdma-core /usr/share/
rdma-core /usr/share/doc/
rdma-core /usr/share/doc/rdma-core/
rdma-core /usr/share/doc/rdma-core/MAINTAINERS
rdma-core /usr/share/doc/rdma-core/README.md
rdma-core /usr/share/doc/rdma-core/ibacm.md
rdma-core /usr/share/doc/rdma-core/ibsrpdm.md
rdma-core /usr/share/doc/rdma-core/libibverbs.md
rdma-core /usr/share/doc/rdma-core/librdmacm.md
rdma-core /usr/share/doc/rdma-core/rxe.md
rdma-core /usr/share/doc/rdma-core/tag_matching.md
rdma-core /usr/share/doc/rdma-core/udev.md
rdma-core /usr/share/licenses/
rdma-core /usr/share/licenses/rdma-core/
rdma-core /usr/share/licenses/rdma-core/COPYING.BSD_MIT
rdma-core /usr/share/man/
rdma-core /usr/share/man/man1/
rdma-core /usr/share/man/man1/cmtime.1.gz
rdma-core /usr/share/man/man1/ib_acme.1.gz
rdma-core /usr/share/man/man1/ibv_asyncwatch.1.gz
rdma-core /usr/share/man/man1/ibv_devices.1.gz
rdma-core /usr/share/man/man1/ibv_devinfo.1.gz
rdma-core /usr/share/man/man1/ibv_rc_pingpong.1.gz
rdma-core /usr/share/man/man1/ibv_srq_pingpong.1.gz
rdma-core /usr/share/man/man1/ibv_uc_pingpong.1.gz
rdma-core /usr/share/man/man1/ibv_ud_pingpong.1.gz
rdma-core /usr/share/man/man1/ibv_xsrq_pingpong.1.gz
rdma-core /usr/share/man/man1/mckey.1.gz
rdma-core /usr/share/man/man1/rcopy.1.gz
rdma-core /usr/share/man/man1/rdma_client.1.gz
rdma-core /usr/share/man/man1/rdma_server.1.gz
rdma-core /usr/share/man/man1/rdma_xclient.1.gz
rdma-core /usr/share/man/man1/rdma_xserver.1.gz
rdma-core /usr/share/man/man1/riostream.1.gz
rdma-core /usr/share/man/man1/rping.1.gz
rdma-core /usr/share/man/man1/rstream.1.gz
rdma-core /usr/share/man/man1/ucmatose.1.gz
rdma-core /usr/share/man/man1/udaddy.1.gz
rdma-core /usr/share/man/man1/udpong.1.gz
rdma-core /usr/share/man/man3/
rdma-core /usr/share/man/man3/efadv_create_driver_qp.3.gz
rdma-core /usr/share/man/man3/efadv_create_qp_ex.3.gz
rdma-core /usr/share/man/man3/efadv_query_ah.3.gz
rdma-core /usr/share/man/man3/efadv_query_device.3.gz
rdma-core /usr/share/man/man3/ibnd_debug.3.gz
rdma-core /usr/share/man/man3/ibnd_destroy_fabric.3.gz
rdma-core /usr/share/man/man3/ibnd_discover_fabric.3.gz
rdma-core /usr/share/man/man3/ibnd_find_node_dr.3.gz
rdma-core /usr/share/man/man3/ibnd_find_node_guid.3.gz
rdma-core /usr/share/man/man3/ibnd_iter_nodes.3.gz
rdma-core /usr/share/man/man3/ibnd_iter_nodes_type.3.gz
rdma-core /usr/share/man/man3/ibnd_set_max_smps_on_wire.3.gz
rdma-core /usr/share/man/man3/ibnd_show_progress.3.gz
rdma-core /usr/share/man/man3/ibv_ack_async_event.3.gz
rdma-core /usr/share/man/man3/ibv_ack_cq_events.3.gz
rdma-core /usr/share/man/man3/ibv_advise_mr.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_dm.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_mw.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_null_mr.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_parent_domain.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_pd.3.gz
rdma-core /usr/share/man/man3/ibv_alloc_td.3.gz
rdma-core /usr/share/man/man3/ibv_attach_counters_point_flow.3.gz
rdma-core /usr/share/man/man3/ibv_attach_mcast.3.gz
rdma-core /usr/share/man/man3/ibv_bind_mw.3.gz
rdma-core /usr/share/man/man3/ibv_close_device.3.gz
rdma-core /usr/share/man/man3/ibv_close_xrcd.3.gz
rdma-core /usr/share/man/man3/ibv_create_ah.3.gz
rdma-core /usr/share/man/man3/ibv_create_ah_from_wc.3.gz
rdma-core /usr/share/man/man3/ibv_create_comp_channel.3.gz
rdma-core /usr/share/man/man3/ibv_create_counters.3.gz
rdma-core /usr/share/man/man3/ibv_create_cq.3.gz
rdma-core /usr/share/man/man3/ibv_create_cq_ex.3.gz
rdma-core /usr/share/man/man3/ibv_create_flow.3.gz
rdma-core /usr/share/man/man3/ibv_create_flow_action.3.gz
rdma-core /usr/share/man/man3/ibv_create_qp.3.gz
rdma-core /usr/share/man/man3/ibv_create_qp_ex.3.gz
rdma-core /usr/share/man/man3/ibv_create_rwq_ind_table.3.gz
rdma-core /usr/share/man/man3/ibv_create_srq.3.gz
rdma-core /usr/share/man/man3/ibv_create_srq_ex.3.gz
rdma-core /usr/share/man/man3/ibv_create_wq.3.gz
rdma-core /usr/share/man/man3/ibv_dealloc_mw.3.gz
rdma-core /usr/share/man/man3/ibv_dealloc_pd.3.gz
rdma-core /usr/share/man/man3/ibv_dealloc_td.3.gz
rdma-core /usr/share/man/man3/ibv_dereg_mr.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_ah.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_comp_channel.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_counters.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_cq.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_flow.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_flow_action.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_qp.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_rwq_ind_table.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_srq.3.gz
rdma-core /usr/share/man/man3/ibv_destroy_wq.3.gz
rdma-core /usr/share/man/man3/ibv_detach_mcast.3.gz
rdma-core /usr/share/man/man3/ibv_event_type_str.3.gz
rdma-core /usr/share/man/man3/ibv_fork_init.3.gz
rdma-core /usr/share/man/man3/ibv_free_device_list.3.gz
rdma-core /usr/share/man/man3/ibv_free_dm.3.gz
rdma-core /usr/share/man/man3/ibv_get_async_event.3.gz
rdma-core /usr/share/man/man3/ibv_get_cq_event.3.gz
rdma-core /usr/share/man/man3/ibv_get_device_guid.3.gz
rdma-core /usr/share/man/man3/ibv_get_device_index.3.gz
rdma-core /usr/share/man/man3/ibv_get_device_list.3.gz
rdma-core /usr/share/man/man3/ibv_get_device_name.3.gz
rdma-core /usr/share/man/man3/ibv_get_pkey_index.3.gz
rdma-core /usr/share/man/man3/ibv_get_srq_num.3.gz
rdma-core /usr/share/man/man3/ibv_import_device.3.gz
rdma-core /usr/share/man/man3/ibv_import_dm.3.gz
rdma-core /usr/share/man/man3/ibv_import_mr.3.gz
rdma-core /usr/share/man/man3/ibv_import_pd.3.gz
rdma-core /usr/share/man/man3/ibv_inc_rkey.3.gz
rdma-core /usr/share/man/man3/ibv_init_ah_from_wc.3.gz
rdma-core /usr/share/man/man3/ibv_is_fork_initialized.3.gz
rdma-core /usr/share/man/man3/ibv_memcpy_from_dm.3.gz
rdma-core /usr/share/man/man3/ibv_memcpy_to_dm.3.gz
rdma-core /usr/share/man/man3/ibv_modify_cq.3.gz
rdma-core /usr/share/man/man3/ibv_modify_flow_action.3.gz
rdma-core /usr/share/man/man3/ibv_modify_qp.3.gz
rdma-core /usr/share/man/man3/ibv_modify_qp_rate_limit.3.gz
rdma-core /usr/share/man/man3/ibv_modify_srq.3.gz
rdma-core /usr/share/man/man3/ibv_modify_wq.3.gz
rdma-core /usr/share/man/man3/ibv_node_type_str.3.gz
rdma-core /usr/share/man/man3/ibv_open_device.3.gz
rdma-core /usr/share/man/man3/ibv_open_qp.3.gz
rdma-core /usr/share/man/man3/ibv_open_xrcd.3.gz
rdma-core /usr/share/man/man3/ibv_poll_cq.3.gz
rdma-core /usr/share/man/man3/ibv_port_state_str.3.gz
rdma-core /usr/share/man/man3/ibv_post_recv.3.gz
rdma-core /usr/share/man/man3/ibv_post_send.3.gz
rdma-core /usr/share/man/man3/ibv_post_srq_ops.3.gz
rdma-core /usr/share/man/man3/ibv_post_srq_recv.3.gz
rdma-core /usr/share/man/man3/ibv_query_device.3.gz
rdma-core /usr/share/man/man3/ibv_query_device_ex.3.gz
rdma-core /usr/share/man/man3/ibv_query_ece.3.gz
rdma-core /usr/share/man/man3/ibv_query_gid.3.gz
rdma-core /usr/share/man/man3/ibv_query_gid_ex.3.gz
rdma-core /usr/share/man/man3/ibv_query_gid_table.3.gz
rdma-core /usr/share/man/man3/ibv_query_pkey.3.gz
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rdma-core /usr/share/man/man7/mlx4dv.7.gz
rdma-core /usr/share/man/man7/mlx5dv.7.gz
rdma-core /usr/share/man/man7/rdma_cm.7.gz
rdma-core /usr/share/man/man7/rsocket.7.gz
rdma-core /usr/share/man/man7/rxe.7.gz
rdma-core /usr/share/man/man8/
rdma-core /usr/share/man/man8/check_lft_balance.8.gz
rdma-core /usr/share/man/man8/dump_fts.8.gz
rdma-core /usr/share/man/man8/dump_lfts.8.gz
rdma-core /usr/share/man/man8/dump_mfts.8.gz
rdma-core /usr/share/man/man8/ibacm.8.gz
rdma-core /usr/share/man/man8/ibaddr.8.gz
rdma-core /usr/share/man/man8/ibcacheedit.8.gz
rdma-core /usr/share/man/man8/ibccconfig.8.gz
rdma-core /usr/share/man/man8/ibccquery.8.gz
rdma-core /usr/share/man/man8/ibfindnodesusing.8.gz
rdma-core /usr/share/man/man8/ibhosts.8.gz
rdma-core /usr/share/man/man8/ibidsverify.8.gz
rdma-core /usr/share/man/man8/iblinkinfo.8.gz
rdma-core /usr/share/man/man8/ibnetdiscover.8.gz
rdma-core /usr/share/man/man8/ibnodes.8.gz
rdma-core /usr/share/man/man8/ibping.8.gz
rdma-core /usr/share/man/man8/ibportstate.8.gz
rdma-core /usr/share/man/man8/ibqueryerrors.8.gz
rdma-core /usr/share/man/man8/ibroute.8.gz
rdma-core /usr/share/man/man8/ibrouters.8.gz
rdma-core /usr/share/man/man8/ibsrpdm.8.gz
rdma-core /usr/share/man/man8/ibstat.8.gz
rdma-core /usr/share/man/man8/ibstatus.8.gz
rdma-core /usr/share/man/man8/ibswitches.8.gz
rdma-core /usr/share/man/man8/ibsysstat.8.gz
rdma-core /usr/share/man/man8/ibtracert.8.gz
rdma-core /usr/share/man/man8/infiniband-diags.8.gz
rdma-core /usr/share/man/man8/iwpmd.8.gz
rdma-core /usr/share/man/man8/perfquery.8.gz
rdma-core /usr/share/man/man8/rdma-ndd.8.gz
rdma-core /usr/share/man/man8/saquery.8.gz
rdma-core /usr/share/man/man8/sminfo.8.gz
rdma-core /usr/share/man/man8/smpdump.8.gz
rdma-core /usr/share/man/man8/smpquery.8.gz
rdma-core /usr/share/man/man8/srp_daemon.8.gz
rdma-core /usr/share/man/man8/vendstat.8.gz
rdma-core /usr/share/perl5/
rdma-core /usr/share/perl5/vendor_perl/
rdma-core /usr/share/perl5/vendor_perl/IBswcountlimits.pm
@baloe
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baloe commented Aug 23, 2022

github won't let me update the log file. Here it is

@baloe
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baloe commented Aug 27, 2022

No idea, noone?

@boegel boegel added this to the 4.x milestone Aug 27, 2022
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boegel commented Aug 27, 2022

@baloe EasyBuild probably doesn't know how to check whether those OS package are installed. Is this on openSUSE?

You can bypass the check using eb --ignore-osdeps

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baloe commented Aug 27, 2022 via email

@baloe
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baloe commented Aug 28, 2022

@baloe EasyBuild probably doesn't know how to check whether those OS package are installed. Is this on openSUSE?

You can bypass the check using eb --ignore-osdeps

Now the installation fails with

[...]
configure:4356: $? = 0
configure:4345: gcc -V >&5
gcc: error: unrecognized command-line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:4356: $? = 1
configure:4345: gcc -qversion >&5
gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'?
gcc: fatal error: no input files
compilation terminated.
configure:4356: $? = 1
configure:4376: checking whether the C compiler works
configure:4398: gcc    conftest.c  >&5
/soft/modules/software/binutils/2.34/bin/ld: /usr/lib/libc.so.6: unknown type [0x13] section `.relr.dyn'
/soft/modules/software/binutils/2.34/bin/ld: skipping incompatible /usr/lib/libc.so.6 when searching for /usr/lib/libc.so.6
/soft/modules/software/binutils/2.34/bin/ld: cannot find /usr/lib/libc.so.6
/soft/modules/software/binutils/2.34/bin/ld: /usr/lib/ld-linux-x86-64.so.2: unknown type [0x13] section `.relr.dyn'
/soft/modules/software/binutils/2.34/bin/ld: skipping incompatible /usr/lib/ld-linux-x86-64.so.2 when searching for /usr/lib/ld-linux-x86-64.so.2
/soft/modules/software/binutils/2.34/bin/ld: cannot find /usr/lib/ld-linux-x86-64.so.2
collect2: error: ld returned 1 exit status
[...]

config.log

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boegel commented Aug 31, 2022

@baloe That looks really broken to me... Was binutils/2.34 build before a glibc update was installed?
Does rebuilding binutils/2.24 help?

@LukeLabrie
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LukeLabrie commented Oct 25, 2022

edit: I'm actually using junest (lightweight arch environment) on a Manjaro system

@baloe I'm currently running into the exact same issue on Manjaro, did you figure out a fix?

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boegel commented Oct 26, 2022

iirc @jplehr was also playing with EasyBuild on Manjaro, maybe he has some experience with this...

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baloe commented Oct 26, 2022

Unfortunately, no, I don't have a solution for this issue. I ended up deciding to only install a GCC and have all the other relevant packages otherwise contained in the foss suite installed by the PETSc installer. However, installing only GCC through easybuild turned to be difficult as well.
@boegel got GCC 11.3.0 to install: easybuilders/easybuild-easyconfigs#16144
but GCC 10 still won't install easybuilders/easybuild-easyconfigs#16235

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ocaisa commented Oct 26, 2022

As mentioned in easybuilders/easybuild-easyconfigs#16235 (comment), I believe the issue here is that the linker the build wants to use with GCCcore(binutils 2.36.1 for GCC 10.3.0) is too old for your system. The way out of this is probably to just use the system linker (which is likely newer). You can do this with

eb --filter-deps=binutils GCCcore-10.3.0.eb

to set this for all your installations (probably a wise move) you can use the easybuild config file or

export EASYBUILD_FILTER_DEPS=binutils

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