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.gitignore
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# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
# C extensions
*.so
# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg
# PyInstaller
# Usually these files are written by a python script from a template
# before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec
# Installer logs
pip-log.txt
pip-delete-this-directory.txt
# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*,cover
# Translations
*.mo
*.pot
# Django stuff:
*.log
# Sphinx documentation
docs/_build/
# PyBuilder
target/
avidaSpatialTools.py~
*~
.Rproj.user
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dev/*cells
dev/cells_0
dev/cells_1
dev/cells_10
dev/cells_100
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dev/cells_95
dev/cells_96
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dev/cells_98
dev/cells_99
colorpercentages2.png
colorpercentages.png
niches_test_env.png
n_tasks.png
optimal_phenotypes_example_environment_heat_map.png
optimal.png
phenotype_niches_11097.png
phenotype_niches_circlesconservation-9patches_10each-environment.png
phenotype_niches_circlesexample_environment.png
phenotype_niches_circlesexample_env.png
phenotype_niches_conservation-9patches_10each_environment.png
phenotype_niches_conservation-9patches_10each_env.png
phenotype_niches_example_environment2.png
phenotype_niches_example_environment.png
phenotype_niches_example_env.png
phenotype_niches_example_.png
species_cluster_grid.png
speciesgrid.png
species_hue_grid.png
test3.png
test.png
visualize_environment.png
example_environment_phenotype_overlay.mov
example_env_phenotype_overlay.mov
movie.mov
toroidal_dist_matrix.csv
*.prof
*.dat
*.csv
*.png
.Rhistory