Skip to content

Commit ce16f56

Browse files
authored
Update README.md
1 parent 6ce76d0 commit ce16f56

File tree

1 file changed

+3
-3
lines changed

1 file changed

+3
-3
lines changed

README.md

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
1-
[![MR.PARETO](https://img.shields.io/badge/MR.PARETO-red)](https://github.com/epigen/mr.pareto/)
1+
[![MrBiomics](https://img.shields.io/badge/MrBiomics-red)](https://github.com/epigen/MrBiomics/)
22
[![DOI](https://zenodo.org/badge/481635018.svg)](https://zenodo.org/badge/latestdoi/481635018)
33
[![](https://tokei.rs/b1/github/epigen/mixscape_seurat?category=code)]()
44
[![](https://tokei.rs/b1/github/epigen/mixscape_seurat?category=files)]()
@@ -10,7 +10,7 @@
1010
A [Snakemake 8](https://snakemake.readthedocs.io/en/stable/) workflow for performing perturbation analyses of pooled (multimodal) CRISPR screens with scRNA-seq read-out (scCRISPR-seq, CROP-seq, Perturb-seq) powered by the R package [Seurat's](https://satijalab.org/seurat/index.html) method [Mixscape](https://satijalab.org/seurat/articles/mixscape_vignette.html).
1111

1212
> [!NOTE]
13-
> This workflow adheres to the module specifications of [MR.PARETO](https://github.com/epigen/mr.pareto), an effort to augment research by modularizing (biomedical) data science. For more details, instructions, and modules check out the project's repository.
13+
> This workflow adheres to the module specifications of [MrBiomics](https://github.com/epigen/MrBiomics), an effort to augment research by modularizing (biomedical) data science. For more details, instructions, and modules check out the project's repository.
1414
>
1515
> ⭐️ **Star and share modules you find valuable** 📤 - help others discover them, and guide our future work!
1616
@@ -81,7 +81,7 @@ Detailed specifications can be found here [./config/README.md](./config/README.m
8181
- [Snakemake Workflow Catalog Entry](https://snakemake.github.io/snakemake-workflow-catalog?usage=epigen/mixscape_seurat)
8282

8383
# 📚 Resources
84-
- Recommended compatible [MR.PARETO](https://github.com/epigen/mr.pareto) modules for
84+
- Recommended compatible [MrBiomics](https://github.com/epigen/MrBiomics) modules for
8585
- upstream processing:
8686
- [scRNA-seq Data Processing & Visualization](https://github.com/epigen/scrnaseq_processing_seurat) for processing (multimodal) single-cell transcriptome data.input.
8787
- downstream analyses:

0 commit comments

Comments
 (0)