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plotDendrogram takes a LONG time with large number of cells #247

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epurdom opened this issue May 29, 2018 · 0 comments
Open

plotDendrogram takes a LONG time with large number of cells #247

epurdom opened this issue May 29, 2018 · 0 comments
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@epurdom
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epurdom commented May 29, 2018

plotDendrogram is much slower than plotClusters, probably having to do with the fact that it calls the ape function for plotting the rectangles, and done individually per cell.

Not really feasible for interactive plotting, e.g. 15K cells. Need to rewrite the internals.
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