From 216388493902ef562cebfb7d9340c86547797238 Mon Sep 17 00:00:00 2001 From: Leonardo Schwarz Date: Wed, 4 Dec 2024 11:51:32 +0100 Subject: [PATCH] restore compatibility --- .../app_interface/process_chunk.py | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/src/depiction_targeted_preproc/app_interface/process_chunk.py b/src/depiction_targeted_preproc/app_interface/process_chunk.py index 00b4de6..8669d76 100644 --- a/src/depiction_targeted_preproc/app_interface/process_chunk.py +++ b/src/depiction_targeted_preproc/app_interface/process_chunk.py @@ -1,11 +1,12 @@ import cyclopts import yaml import zipfile -from depiction_targeted_preproc.pipeline.prepare_params import Params -from depiction_targeted_preproc.pipeline_config.artifacts_mapping import get_result_files_new from pathlib import Path +from snakemake_invoke import SnakemakeInvoke from snakemake_invoke.config import SnakemakeInvokeConfig -from snakemake_invoke.snakemake_invoke import SnakemakeInvoke + +from depiction_targeted_preproc.pipeline.prepare_params import Params +from depiction_targeted_preproc.pipeline_config.artifacts_mapping import get_result_files_new app = cyclopts.App()