compila_AM4.source

_pwd=$(pwd)

git clone --recursive --branch 2021.03 https://github.com/NOAA-GFDL/AM4.git
cd AM4/src/
rm -rf ice_param	
git checkout -b mars_branch
git submodule add https://www.github.com/nasa/AmesGCM.git
git submodule add https://github.com/NOAA-GFDL/mkmf.git
git submodule add https://github.com/NOAA-GFDL/FRE.git
cd AmesGCM/patches/
./apply_patch.sh

cd $_pwd
cp $_pwd/src/mkmf.template.mine AM4/bin/
cp $_pwd/src/compile.mine AM4/exec/
cp $_pwd/src/fms_mars_default_v3.1.fmg AM4/src
singularity exec -B ./AM4:/opt/AM4 --pwd /opt/AM4/exec ames_env.sif ./compile.mine