-
Notifications
You must be signed in to change notification settings - Fork 5
/
fp_sumVox_pip.m
32 lines (22 loc) · 1.03 KB
/
fp_sumVox_pip.m
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
function [MIM_, MIC_] = fp_sumVox_pip(signal_roi, nroi, ndim, nvoxroi, fres, filt)
%FCMEAN pipeline.
% Copyright (c) 2022 Franziska Pellegrini and Stefan Haufe
%%
output = {'MIM','MIC'};
% For memory purposes, we need to calculate this in a
% region-by-region way
for oroi = 1:nroi-1
for uroi = oroi+1:nroi
clear data npcs mic mim conn inds
npcs = repmat(ndim,1,nvoxroi(oroi)+nvoxroi(uroi));
data = cat(1,signal_roi{oroi}, signal_roi{uroi});
[inds, ~] = fp_npcs2inds(npcs);
conn = data2sctrgcmim(data, fres, 30, 0,0, [], inds, output,0);
% extract measures out of the conn struct
[mim, mic, ~,~,~] = fp_unwrap_conn(conn,nvoxroi(oroi)+nvoxroi(uroi),filt,[]);
MIM_(oroi,uroi) = squeeze(mean(mean(mim(1:nvoxroi(oroi),nvoxroi(oroi):end),1),2));
MIM_(uroi,oroi) = MIM_(oroi,uroi);
MIC_(oroi,uroi) = squeeze(mean(mean(mic(1:nvoxroi(oroi),nvoxroi(oroi):end),1),2));
MIC_(uroi,oroi) = MIC_(oroi,uroi);
end
end