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CHANGELOG.md

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TAXREF-LD changelog

[17.0] 2024-07-30

Added

Changed

  • Update to TAXREF version 17
  • Change URIs of graphs to non-versioned URIs
  • Fixed issue in the generation of the interactions: some interactions involve the TAXREF ids of synonyms, not reference names. As a results, the process was generating wrong URIs of taxa with ids of synonyms. The fix is to refer always to the referenceId field of the interaction.
  • Fixed issue in the generation of the DBXRefs: all ids were used as taxa whereas some ids are not reference ids. That lead to generating wrong URIs of taxa with ids of synonyms.
  • Fixed bug in the generation of vernacular names: names were generated with 3-letter language tags that must be mapped to 2-letter tags, e.g. @fra instead of @fr

[15.2] 2022-07-29

Changed

  • Fixed issues in the ontology (owl:AnnotationProperties instead of owl:ObjectProperties)
  • Update of dataset metadata (fixed issues, added dcat:Distribution, better named graphs description...)
  • Regenerate taxonomy (taxa and names) to fix an issue with missing taxa (detected with Agroportal)
  • Reorganize data dump as a zip file with subfolders rather than a tar of zip files

[15.1] 2022-01-19

Added

  • Development stages and sex as part of the species interactions, e.g.: species A in larva stage feeds on B.
  • Links with External IDs for Cockroach Species File Online, IUCN Red List, World Flora Online, ZooBank
  • For each taxon, add Darwin Core properties with higher levels ranks: dwc:subgenus, dwc:genus, dwc:subfamily, dwc:family, dwc:order, dwc:kingdom (issue #8)
  • Add owl:sameAs links from locations to SANDRE URIs

Changed

  • Update to TAXREF version 15
  • Remove TAXREF version from all URIs of the dataset, keep version only with owl:versionInfo of the dataset resource
  • Change modeling of ranks, habitats & status values: gather them in SKOS collections rather than making them instances of a subclass of skos:Concept
  • Upgrade to Morph-xR2RML version 1.3.2

2021-05-07

Changed

  • Add direct link to image files with foaf:depiction (in addition to instances of schema:ImageObject with schema:image) (issue #6)
  • Add dct:identifier to taxa and names with TAXREF identifier
  • Dataset description: add a SPARQL Service Description, and refactoring into a single file Taxrefld_static_dataset_description.ttl

[13.0] 2020-06-23 - TAXREF v13

Added

  • Update with TAXREF version 13.0
  • Added media files associated with taxa
  • Added direct link to external identifiers (in addition to schema:identifier) (issue #3)

Changed

  • Vernacular names modelled as instances of skosxl:Label instead of using reification. New property taxrefprop:vernacularNamesXL (issue #2)
  • Added documentation describing Turtle archives and generation pipeline (issue #4)
  • Older versions managed with tags instead of keeping separate versioned folders in directory dataset
  • Fixed bug in external identifiers: Wikidata properties were in namespace http://www.wikidata.org/entity/, changed to http://www.wikidata.org/prop/direct/
  • External identifiers forced to type string

[12.0] 2019-11-12 - TAXREF v12

Added

  • Added legal statuses (directives, conventions, regulations, protections)
  • Added conservation statuses (from international/european/national/regional red lists)
  • Added species interactions
  • Added location and bibliographical source to vernacular names (reified statements)
  • Added cross-references to other datasources by means of external IDs (see property schema:identifier on taxa (owl:Class) and scientific names (skos:Concept))
  • Added equivalent webpages of other datasources (see property foaf:page on taxa (owl:Class) and scientific names (skos:Concept))

Changed

  • Update with TAXREF version 12
  • Biogeographical statuses modelled in a more general way consistent with other types of statuses