From d7cbf2990011f04c5b9a839c356cb1b66f8b2406 Mon Sep 17 00:00:00 2001
From: planemo-autoupdate <planemo-autoupdate@users.noreply.github.com>
Date: Mon, 17 Jul 2023 04:49:44 +0000
Subject: [PATCH] Updating tools/scater from version 1.26.0 to 1.28.0

---
 tools/scater/macros.xml                   | 4 ++--
 tools/scater/scater-filter.xml            | 2 +-
 tools/scater/scater-plot-dist-scatter.xml | 2 +-
 3 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/tools/scater/macros.xml b/tools/scater/macros.xml
index 72a5d172316..9ec9f6c0c19 100644
--- a/tools/scater/macros.xml
+++ b/tools/scater/macros.xml
@@ -1,12 +1,12 @@
 <macros>
-    <token name="@TOOL_VERSION@">1.26.0</token>
+    <token name="@TOOL_VERSION@">1.28.0</token>
     <token name="@PROFILE@">20.01</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">bioconductor-scater</requirement>
             <requirement type="package" version="1.7.3">r-optparse</requirement>
             <requirement type="package" version="0.0.8">r-workflowscriptscommon</requirement>
-            <requirement type="package" version="1.16.0">bioconductor-loomexperiment</requirement>
+            <requirement type="package" version="1.18.0">bioconductor-loomexperiment</requirement>
             <yield />
         </requirements>
     </xml>
diff --git a/tools/scater/scater-filter.xml b/tools/scater/scater-filter.xml
index 29d62ed03d1..8d5941faa9d 100644
--- a/tools/scater/scater-filter.xml
+++ b/tools/scater/scater-filter.xml
@@ -5,7 +5,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="0.95_0">r-robustbase</requirement>
+        <requirement type="package" version="0.99_0">r-robustbase</requirement>
     </expand>
     <command detect_errors="exit_code"><![CDATA[
 #if $filter_type.filter_type_selector == 'manual':
diff --git a/tools/scater/scater-plot-dist-scatter.xml b/tools/scater/scater-plot-dist-scatter.xml
index e3189e26dfe..a44be3176cc 100644
--- a/tools/scater/scater-plot-dist-scatter.xml
+++ b/tools/scater/scater-plot-dist-scatter.xml
@@ -5,7 +5,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="0.4.0">r-ggpubr</requirement>
+        <requirement type="package" version="0.6.0">r-ggpubr</requirement>
         <requirement type="package" version="1.2.1">r-scales</requirement>
     </expand>
     <command detect_errors="exit_code"><![CDATA[