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Request: Update Eggnog wrapper #786

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jennaj opened this issue Jan 22, 2025 · 2 comments
Open

Request: Update Eggnog wrapper #786

jennaj opened this issue Jan 22, 2025 · 2 comments

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@jennaj
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jennaj commented Jan 22, 2025

Tool: https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper

Request and details at: https://help.galaxyproject.org/t/updating-eggnog-software-and-database/14487

Thanks!

@krabapple
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Hello, I submitted the query about updating this galaxy tool.

Just NB: even the online eggnog-mapper server at http://eggnog-mapper.embl.de/
which I have verified uses the latest eggnog-mapper version v2.1.12, does not appear to use database v6.
According to what is visible on the site, it is still using v5.

I have emailed the eggnog-mapper.embl.de contacts to ask why this is so.

@reid-wagner
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reid-wagner commented Jan 25, 2025

I'm looking into the changes needed for this update. Please let me know what you learn about the v5 vs v6 issue. Thanks!

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