From adf75811c1ef406ad54d4720ddf93c2ac060406a Mon Sep 17 00:00:00 2001 From: gaelforget Date: Sun, 30 Apr 2023 17:21:55 -0400 Subject: [PATCH] update notebook --- docs/src/notebook.jl | 576 ++++++++++++++++++++++++++++++++++++++++--- 1 file changed, 542 insertions(+), 34 deletions(-) diff --git a/docs/src/notebook.jl b/docs/src/notebook.jl index eb21fc8..a5dc1cd 100644 --- a/docs/src/notebook.jl +++ b/docs/src/notebook.jl @@ -16,7 +16,6 @@ end # ╔═╡ 8e7742bc-ed2e-11ec-2bbe-adbcf21330e7 begin - using Pkg; Pkg.activate() using Dataverse, PlutoUI, Downloads using DataFrames, PrettyTables "Packages ready" @@ -49,15 +48,36 @@ TableOfContents() # ╔═╡ e90fc026-b134-4694-87db-b5fc8fd1dcb2 begin doi_select = @bind DOI Select(["doi:10.7910/DVN/AVVGYX","doi:10.7910/DVN/EE3C40","doi:10.7910/DVN/RNXA2A"]) - md"""## `get_dataset` + md"""## Explore a Dataset Select doi : $(doi_select) - + + A Dataset may contain multiple files. """ end +# ╔═╡ 2240395b-4112-4e8a-a233-26fde9dffbc4 +begin + #dataset = NativeApi.get_dataset(DOI) + #df=pyDataverse.dataset_file_list(DOI) + df=Dataverse.file_list(DOI) + "Done scanning dataset files" +end + +# ╔═╡ eb402ef0-96fb-41d0-93e4-7fe5a69e8465 +let + with_terminal() do + pretty_table(df,header_crayon=crayon"light_yellow",alignment=:l, + highlighters = hl_col(1, crayon"light_blue")) + end +end + + # ╔═╡ 061ea815-66ef-4e06-987f-fbd1f7e837d7 -md"""## `get_children`""" +md"""## Explore a Dataverse + +A Dataverse may contain multiple Datasets. Here each index of `tree` is one Dataset. Below we select one of them. +""" # ╔═╡ 756bec67-c27e-49c1-9573-9521746cf856 begin @@ -68,21 +88,11 @@ end # ╔═╡ c3c4448f-63bb-481f-a28a-dc4ad0311519 tree -# ╔═╡ 605f22ce-3e41-4e25-9fea-59803af1c17e -begin - dataversename=:ECCO_clim - Dataverse.file_list(dataversename) -end - # ╔═╡ ecfc53da-38b4-478c-8559-41746d3cd8d0 begin nf=length(tree) num_select = @bind num Select(1:nf) - md""" - - Dataverse name : $(dataversename) - - Select a dataset : $(num_select)""" + md"""Select a dataset : $(num_select)""" end # ╔═╡ 135e1777-6a29-4736-9b6d-60f88dbd405a @@ -99,7 +109,7 @@ begin file_select = @bind file Select(tree[num].filename) ii=findall(tree[num].filename.==file) pidURL=tree[num].pidURL[ii][1] - md"""## Select & Download + md"""## Select & Download File Select file : $(file_select) """ @@ -129,25 +139,522 @@ md"""## Appendix""" # ╔═╡ d216f95e-fc57-4b89-b796-be08b3f137d2 begin (DataAccessApi,NativeApi)=pyDataverse.APIs(do_install=true) - "APIs ready" + "pyDataverse APIs ready" end -# ╔═╡ 2240395b-4112-4e8a-a233-26fde9dffbc4 -begin - dataset = NativeApi.get_dataset(DOI) - df=pyDataverse.dataset_file_list(DOI) - "Done scanning dataset files" -end +# ╔═╡ 00000000-0000-0000-0000-000000000001 +PLUTO_PROJECT_TOML_CONTENTS = """ +[deps] +DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" +Dataverse = "9c0b9be8-e31e-490f-90fe-77697562404d" +Downloads = "f43a241f-c20a-4ad4-852c-f6b1247861c6" +PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" +PrettyTables = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -# ╔═╡ eb402ef0-96fb-41d0-93e4-7fe5a69e8465 -let - with_terminal() do - pretty_table(df,header_crayon=crayon"light_yellow",alignment=:l, - highlighters = hl_col(1, crayon"light_blue")) - end -end +[compat] +DataFrames = "~1.5.0" +Dataverse = "~0.2.0" +PlutoUI = "~0.7.50" +PrettyTables = "~2.2.3" +""" + +# ╔═╡ 00000000-0000-0000-0000-000000000002 +PLUTO_MANIFEST_TOML_CONTENTS = """ +# This file is machine-generated - editing it directly is not advised + +julia_version = "1.9.0-rc2" 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