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Mediating acyl group transfer and redox reactions through a covalently linked lipoate prosthetic group, facilitating interactions with cognate enzymes for processing or offloading of the acyl-bound or reduced lipoate intermediate.
source
based on proposed sibling def GO:0140414 phosphopantetheine-dependent carrier activity
def
(note to self make carrier protein activity broad synonym, and fix typo in covalently for GO:0140414)
Reference, in format PMID:#######
(REQUIRED) (to follow need to find)
Gene product name and ID to be annotated to this term
I thought this was useful (for inputs and outputs)
Why is H-Protein a Carrier?
It carries intermediates
The H-protein's covalently attached lipoic acid acts as a swinging arm to pick up and deliver reaction intermediates.
It specifically carries the aminomethyl (-CH₂-NH₃⁺) group from P-protein to T-protein.
It undergoes cyclic modifications
The lipoic acid on the H-protein cycles between:
Oxidized (active) form
Aminomethylated form (after reaction with glycine)
Reduced (dihydrolipoamide) form (after interacting with T-protein)
The L-protein then regenerates the oxidized state, allowing the cycle to continue.
It does not catalyze reactions itself
Unlike enzymes (which actively catalyze chemical transformations), the H-protein simply transfers chemical groups between enzymes.
There is an exactly analogous carrier subprocess involved in the reactions mediated by the2-oxoacid (alpha-ketoacid) dehydrogenase complexes, whose ontology terms @sjm41 revised and reorganized a few months ago. Any useful precedents or references there?
Please provide as much information as you can:
lipoate-dependent carrier activity
Mediating acyl group transfer and redox reactions through a covalently linked lipoate prosthetic group, facilitating interactions with cognate enzymes for processing or offloading of the acyl-bound or reduced lipoate intermediate.
source
based on proposed sibling def GO:0140414 phosphopantetheine-dependent carrier activity
def
(note to self make carrier protein activity broad synonym, and fix typo in covalently for GO:0140414)
Reference, in format PMID:#######
(REQUIRED) (to follow need to find)
Gene product name and ID to be annotated to this term
https://www.pombase.org/gene/SPBP19A11.01
(I need for GO-CAM for glycine cleavage complex subunit H, but will also be used for other lipoate-dependent carriers)
GO:0140104 molecular carrier activity
Cross-references
For enzymes, please provide RHEA and/or EC numbers.
Can also provide MetaCyc, KEGG, Wikipedia, and other links.
Any other information
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