02-Logging/00-index.ipynb

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    "# Logging\n",
    "\n",
    "This tutorial explains how to log quantities computed during the simulation.\n",
    "\n",
    "\n",
    "**Prerequisites:**\n",
    "\n",
    "While logging is a general topic, this tutorial uses MD and HPMC simulations to demonstrate.\n",
    "The tutorials [Introducing HOOMD blue](../00-Introducing-HOOMD-blue/00-index.ipynb) and [Introducing Molecular Dynamics](../01-Introducing-Molecular-Dynamics/00-index.ipynb) teach these concepts."
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    "## Outline\n",
    "\n",
    "1. [Logging to a file](01-Logging-to-a-file.ipynb) - What is a Logger? How can I write thermodynamic and other quantities to a file? How can I access that data?\n",
    "2. [Saving Array Quantities](02-Saving-Array-Quantities.ipynb) - How can I save per-particle quantities for later analysis? How can I access that data?\n",
    "3. [Storing Particle Shape](03-Storing-Particle-Shape.ipynb) - How can I store particle shape for use with visualization tools?\n",
    "4. [Writing Formatted Output](04-Writing-Formatted-Output.ipynb) - How do I display status information during a simulation? How can I log user-defined quantities? How can I write formatted output to a text file?"
   ]
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    "This tutorial is written with [jupyter](https://jupyter.org/). You can download the source from the [hoomd-examples](https://github.com/glotzerlab/hoomd-examples) repository."
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