From 04962ac56423ceb14422b0bb4db8c3f8a50d231f Mon Sep 17 00:00:00 2001
From: Josiah Seaman <josiah@newline.us>
Date: Thu, 18 Jun 2020 09:20:12 -0600
Subject: [PATCH] Added small_test.v17

---
 .../1/chunk0_bin1.schematic.json              | 67 +++++++++++++++++++
 .../small_test.v17/1/seq_chunk0_bin1.fa       |  2 +
 public/test_data/small_test.v17/bin2file.json | 21 ++++++
 3 files changed, 90 insertions(+)
 create mode 100644 public/test_data/small_test.v17/1/chunk0_bin1.schematic.json
 create mode 100644 public/test_data/small_test.v17/1/seq_chunk0_bin1.fa
 create mode 100644 public/test_data/small_test.v17/bin2file.json

diff --git a/public/test_data/small_test.v17/1/chunk0_bin1.schematic.json b/public/test_data/small_test.v17/1/chunk0_bin1.schematic.json
new file mode 100644
index 00000000..9c858d52
--- /dev/null
+++ b/public/test_data/small_test.v17/1/chunk0_bin1.schematic.json
@@ -0,0 +1,67 @@
+{"json_version":
+17,"bin_width":
+1,"first_bin":
+0,"last_bin":
+17,"includes_connectors":
+true,"components":
+[{"first_bin":
+0,"last_bin":
+0,"occupants":
+[],"matrix":
+[],"arrivals":
+[],"departures":
+[{"upstream":
+0,"downstream":
+1,"participants":
+[]}],"x":
+0,"compressedX":
+0},{"first_bin":
+1,"last_bin":
+4,"occupants":
+[0,1,2],"matrix":
+[[0,[[0,1,2,3],[[1,0,[[1,1]]],[1,0,[[2,2]]],[1,0,[[3,3]]],[1,0,[[4,4]]]]]],[1,[[0,1,2,3],[[1,0,[[1,1]]],[1,0,[[2,2]]],[1,0,[[3,3]]],[1,0,[[4,4]]]]]],[2,[[0,1,2,3],[[1,0,[[1,1]]],[1,0,[[2,2]]],[1,0,[[3,3]]],[1,0,[[4,4]]]]]]],"arrivals":
+[],"departures":
+[{"upstream":
+4,"downstream":
+12,"participants":
+[2]},{"upstream":
+4,"downstream":
+5,"participants":
+[0,1]}],"x":
+0,"compressedX":
+0},{"first_bin":
+5,"last_bin":
+11,"occupants":
+[0,1,2],"matrix":
+[[0,[[4,5,6],[[1,0,[[5,5]]],[1,0,[[6,6]]],[1,0,[[7,7]]]]]],[1,[[4,5,6],[[1,1,[[5,5]]],[1,1,[[6,6]]],[1,1,[[7,7]]]]]],[2,[[0,1,2,3],[[1,0,[[11,11]]],[1,0,[[12,12]]],[1,0,[[13,13]]],[1,0,[[14,14]]]]]]],"arrivals":
+[{"upstream":
+17,"downstream":
+5,"participants":
+[2]}],"departures":
+[{"upstream":
+11,"downstream":
+12,"participants":
+[0,1,2]}],"x":
+6,"compressedX":
+5},{"first_bin":
+12,"last_bin":
+17,"occupants":
+[0,1,2],"matrix":
+[[0,[[0,1,2,3,4,5],[[1,0,[[8,8]]],[1,0,[[9,9]]],[1,0,[[10,10]]],[1,0,[[11,11]]],[1,0,[[12,12]]],[1,0,[[13,13]]]]]],[1,[[0,1,2,3,4,5],[[1,0,[[8,8]]],[1,0,[[9,9]]],[1,0,[[10,10]]],[1,0,[[11,11]]],[1,0,[[12,12]]],[1,0,[[13,13]]]]]],[2,[[0,1,2,3,4,5],[[1,0,[[5,5]]],[1,0,[[6,6]]],[1,0,[[7,7]]],[1,0,[[8,8]]],[1,0,[[9,9]]],[1,0,[[10,10]]]]]]],"arrivals":
+[{"upstream":
+4,"downstream":
+12,"participants":
+[2]}],"departures":
+[{"upstream":
+17,"downstream":
+5,"participants":
+[2]},{"upstream":
+17,"downstream":
+18,"participants":
+[]}],"x":
+15,"compressedX":
+10}],"path_names":
+["5","5-","6"],"total_nr_files":
+2,"pangenome_length":
+17,"filename":
+"chunk0_bin1.schematic.json"}
\ No newline at end of file
diff --git a/public/test_data/small_test.v17/1/seq_chunk0_bin1.fa b/public/test_data/small_test.v17/1/seq_chunk0_bin1.fa
new file mode 100644
index 00000000..a0be2ce5
--- /dev/null
+++ b/public/test_data/small_test.v17/1/seq_chunk0_bin1.fa
@@ -0,0 +1,2 @@
+>first_bin: 1 last_bin: 17
+AGGAAGTGTCCTCTCAG
diff --git a/public/test_data/small_test.v17/bin2file.json b/public/test_data/small_test.v17/bin2file.json
new file mode 100644
index 00000000..f02f7696
--- /dev/null
+++ b/public/test_data/small_test.v17/bin2file.json
@@ -0,0 +1,21 @@
+{
+    "json_version": 17,
+    "pangenome_length": 17,
+    "includes_connectors": true,
+    "zoom_levels": {
+        "1": {
+            "bin_width": 1,
+            "last_bin": 17,
+            "files": [
+                {
+                    "file": "chunk0_bin1.schematic.json",
+                    "first_bin": 0,
+                    "last_bin": 17,
+                    "x": 0,
+                    "compressedX": 0,
+                    "fasta": "seq_chunk0_bin1.fa"
+                }
+            ]
+        }
+    }
+}
\ No newline at end of file