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run_name in the .xenium controls how samples appear in the xenium explorer
Right now image_key is used here which leads to all Xenium samples appearing as morphology_focus in the Xenium explorer.
I think it would be nice to let the user specify a sample name, which would make it less confusing to work with multiple samples.
Let me know what you think, I could also try and do a PR :)
The text was updated successfully, but these errors were encountered:
Hi @pakiessling, this is indeed interesting for Xenium data. Since it's a very minor change, I'll do it myself quickly now, and it will be available for sopa==2.0.0!
run_name
in the .xenium controls how samples appear in the xenium explorerRight now
image_key
is used here which leads to all Xenium samples appearing as morphology_focus in the Xenium explorer.I think it would be nice to let the user specify a sample name, which would make it less confusing to work with multiple samples.
Let me know what you think, I could also try and do a PR :)
The text was updated successfully, but these errors were encountered: