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[Feature] Allow setting of run_name in sopa explorer write #139

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pakiessling opened this issue Oct 16, 2024 · 2 comments
Open

[Feature] Allow setting of run_name in sopa explorer write #139

pakiessling opened this issue Oct 16, 2024 · 2 comments
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enhancement New feature or request

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@pakiessling
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run_name in the .xenium controls how samples appear in the xenium explorer
Right now image_key is used here which leads to all Xenium samples appearing as morphology_focus in the Xenium explorer.

grafik

I think it would be nice to let the user specify a sample name, which would make it less confusing to work with multiple samples.

Let me know what you think, I could also try and do a PR :)

@quentinblampey
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Hi @pakiessling, this is indeed interesting for Xenium data. Since it's a very minor change, I'll do it myself quickly now, and it will be available for sopa==2.0.0!

@pakiessling
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Cool thanks a lot!

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