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b/latest/html/_images/spin_examples.png differ diff --git a/latest/html/_images/spin_spatial_distr_example.png b/latest/html/_images/spin_spatial_distr_example.png index 13d927f3d08..1aa51eb1947 100644 Binary files a/latest/html/_images/spin_spatial_distr_example.png and b/latest/html/_images/spin_spatial_distr_example.png differ diff --git a/latest/html/building_bundled_executables.html b/latest/html/building_bundled_executables.html index b8a61a2ae5f..b90141ccbf4 100644 --- a/latest/html/building_bundled_executables.html +++ b/latest/html/building_bundled_executables.html @@ -156,10 +156,10 @@

Using the build script

The command-line arguments for the pycbc_build_eah.sh build script are:

$ ../tools/einsteinathome/pycbc_build_eah.sh --force-debian4 --help
->> [Wed Jul 12 09:42:19 UTC 2023] Start ../tools/einsteinathome/pycbc_build_eah.sh --force-debian4 --help
+>> [Wed Jul 12 19:42:59 UTC 2023] Start ../tools/einsteinathome/pycbc_build_eah.sh --force-debian4 --help
 
 
->> [Wed Jul 12 09:42:19 UTC 2023] Using Debian 4.0 (etch) settings
+>> [Wed Jul 12 19:42:59 UTC 2023] Using Debian 4.0 (etch) settings
 Options:
 
     --force-debian4                 force Debian 4.0 build, must be first option in command-line
diff --git a/latest/html/detector.html b/latest/html/detector.html
index 80813febbc8..5e29eef99e9 100644
--- a/latest/html/detector.html
+++ b/latest/html/detector.html
@@ -211,7 +211,7 @@ 

Time source gravitational-wave passes through detector
$ python ../examples/detector/delay.py
 GW passed through H1 0.0 seconds relative to passing by Hanford
-GW passed through L1 0.0024441643159689237 seconds relative to passing by Hanford
+GW passed through L1 0.002444164315968924 seconds relative to passing by Hanford
 GW passed through V1 -0.014733669722672925 seconds relative to passing by Hanford
 
@@ -259,7 +259,7 @@

Antenna Patterns and Projecting a Signal into the Detector FrameDownload

This will create the following plot:

-../../_images/relative.png +../../_images/relative.png

The scatter points show each walker’s position after the last iteration. The points are colored by the signal-to-noise ratio at that point.

diff --git a/latest/html/inference/examples/sampler_platter.html b/latest/html/inference/examples/sampler_platter.html index da0707db78c..352117ce51d 100644 --- a/latest/html/inference/examples/sampler_platter.html +++ b/latest/html/inference/examples/sampler_platter.html @@ -287,7 +287,7 @@

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"inference_followup": 77, "jobsetup": 77, "matched_filt": [77, 90], "minifollowup": 77, "pegasus_sit": 77, "pegasus_workflow": 77, "psdfile": 77, "splittabl": [77, 97], "pycbc_condition_strain": 78, "oper": 78, "split": [78, 85, 97], "exist": [78, 96], "shorter": 78, "condit": 78, "caveat": 78, "backport": 79, "bug": 79, "fix": 79, "previou": [79, 93, 95], "non": 80, "placement": 80, "pycbc_geom_nonspinbank": [80, 98], "background": [80, 87], "geometr": 80, "pycbc_geom_aligned_bank": 80, "stochast": 80, "ian": 80, "": [80, 88], "recommend": 80, "should": 80, "want": [80, 95], "f2": 80, "metric": 80, "anoth": 80, "ie": 80, "imr": 80, "direct": 80, "pycbc_aligned_stoch_bank": 80, "lalapps_cbc_sbank": 80, "sbank": 80, "hybrid": 80, "approach": 80, "best": 80, "both": 80, "world": 80, "The": [80, 86, 89, 90, 96, 97, 98], "interact": 81, "tutori": 81, "upload": 82, "gracedb": 82, "requir": [82, 88], "input": 82, "one": 83, "multipl": 83, "td": 83, "fd": 83, "togeth": 83, "gw": 83, "phase": 83, "amplitud": 83, "frequenc": 83, "evolut": 83, "new": [84, 93], "approxim": 84, "avail": 84, "ad": [84, 96], "custom": 84, "basic": 85, "tabl": [85, 97], "usag": [86, 89, 90, 96, 97, 98], "section": [86, 88, 89, 90, 95, 97, 98], "hdf5": 87, "limit": 87, "asign": 87, "interfac": 88, "suppli": 88, "overrid": 88, "global": 88, "xxx": 88, "subsect": 88, "macro": 88, "complet": 88, "sharedopt": 88, "them": [89, 90, 97, 98], "lalapps_inspiral_ahop": 90, "pycbc_make_inference_inj_workflow": 91, "A": [91, 92, 93, 94, 95], "plan": [91, 92, 93, 95], "pycbc_make_inference_workflow": 92, "gw170814": 92, "pycbc_make_offline_search_workflow": 93, "submit": [93, 95], "monitor": [93, 95], "debug": [93, 95], "pegasu": [93, 95], "dashboard": [93, 95], "analyz": 93, "reus": [93, 95], "gp": 93, "end": 93, "re": 93, "defin": [93, 96], "fail": 93, "partial": 93, "open": 93, "scienc": 93, "grid": 93, "prerequisit": 93, "pycbc_make_psd_estimation_workflow": 94, "pycbc_make_offline_grb_workflow": 95, "grb": 95, "cbc": 95, "profil": 95, "directori": 95, "ar": 95, "you": 95, "ye": 95, "No": 95, "my": 95, "own": 95, "descript": 96, "syntax": 96, "number": 96, "ifo": 96, "provid": 96, "pad": 96, "pre": 96, "xml": 96, "pycbc_splitbank": 97, "ex": 98, "lalapps_tmpltbank_ahop": 98}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx.ext.viewcode": 1, "sphinx": 57}, "alltitles": {"Applications and Workflows": [[9, "applications-and-workflows"]], "Calculating the Effectualness (Fitting Factor) of Template Banks": [[10, "calculating-the-effectualness-fitting-factor-of-template-banks"]], "Introduction": [[10, "introduction"], [22, "introduction"], [23, "introduction"], [26, "introduction"], [29, "introduction"], [31, "introduction"], [80, "introduction"], [80, "id5"], [82, "introduction"], [85, "introduction"], [86, "introduction"], [87, "introduction"], [88, "introduction"], [89, "introduction"], [90, "introduction"], [91, "introduction"], [92, "introduction"], [93, "introduction"], [95, "introduction"], [96, "introduction"], [97, "introduction"], [98, "introduction"]], "Creating a configuration file": [[10, "creating-a-configuration-file"]], "Generating the workflow": [[10, "generating-the-workflow"], [22, "generating-the-workflow"], [93, "generating-the-workflow"]], "Understanding the results": [[10, "understanding-the-results"], [22, "understanding-the-results"]], "Validating template banks for production analysis": [[10, "validating-template-banks-for-production-analysis"]], "Procedure": [[10, "procedure"]], "Evaluation": [[10, "evaluation"]], "Known issues": [[10, "known-issues"]], "Building Documentation for GitHub Pages": [[11, "building-documentation-for-github-pages"]], "Creating a GitHub project page": [[11, "creating-a-github-project-page"]], "Building and pushing the documentation": [[11, "building-and-pushing-the-documentation"]], "Building Bundled Executables": [[12, "building-bundled-executables"]], "Using the build script": [[12, "using-the-build-script"]], "Building Releases for CVMFS": [[12, "building-releases-for-cvmfs"]], "Catalog of Observed Gravitational-wave Mergers": [[13, "catalog-of-observed-gravitational-wave-mergers"]], "Which mergers do we have information about?": [[13, "which-mergers-do-we-have-information-about"]], "Plotting some key statistics from the catalog": [[13, "plotting-some-key-statistics-from-the-catalog"]], "Accessing data around each event": [[13, "accessing-data-around-each-event"]], "Use of PyCBC in Scientific Publications": [[14, "use-of-pycbc-in-scientific-publications"]], "Citing the PyCBC Software": [[14, "citing-the-pycbc-software"]], "Citing the scientific publications that describe the algorithms": [[14, "citing-the-scientific-publications-that-describe-the-algorithms"]], "Bayesian Inference": [[14, "bayesian-inference"]], "Searches for Compact Binary Coalescence": [[14, "searches-for-compact-binary-coalescence"]], "Query times of valid data, hardware injections, and more.": [[15, "query-times-of-valid-data-hardware-injections-and-more"]], "Determine the times an instrument has valid data": [[15, "determine-the-times-an-instrument-has-valid-data"]], "Finding times of hardware injections": [[15, "finding-times-of-hardware-injections"]], "What flags can I query?": [[15, "what-flags-can-i-query"]], "Gravitational-wave Detectors": [[16, "gravitational-wave-detectors"]], "Detector Locations": [[16, "detector-locations"]], "Light travel time between detectors": [[16, "light-travel-time-between-detectors"]], "Time source gravitational-wave passes through detector": [[16, "time-source-gravitational-wave-passes-through-detector"]], "Antenna Patterns and Projecting a Signal into the Detector Frame": [[16, "antenna-patterns-and-projecting-a-signal-into-the-detector-frame"]], "Documentation for Developers": [[17, "documentation-for-developers"]], "Using PyCBC Distributions from PyCBC Inference": [[18, "using-pycbc-distributions-from-pycbc-inference"]], "Generating samples in a Python script by using the .ini file": [[18, "generating-samples-in-a-python-script-by-using-the-ini-file"]], "Making Mass Distributions in M1 and M2": [[18, "making-mass-distributions-in-m1-and-m2"]], "Generating mchirp and q from uniform mass1 and mass2": [[18, "generating-mchirp-and-q-from-uniform-mass1-and-mass2"]], "Sky Location Distribution as Spin Distribution Example": [[18, "sky-location-distribution-as-spin-distribution-example"]], "Running PyCBC under Docker": [[19, "running-pycbc-under-docker"]], "Using jupyter notebook within docker": [[19, "using-jupyter-notebook-within-docker"]], "Sharing user files and SSH keys": [[19, "sharing-user-files-and-ssh-keys"]], "Documenting PyCBC code": [[20, "documenting-pycbc-code"]], "Sphinx": [[20, "sphinx"]], "Documenting the PyCBC package": [[20, "documenting-the-pycbc-package"]], "Documenting PyCBC modules": [[20, "documenting-pycbc-modules"]], "Documenting PyCBC scripts": [[20, "documenting-pycbc-scripts"]], "Extending PyCBC with external plugins": [[21, "extending-pycbc-with-external-plugins"]], "Dag Generator for Doing Faithfulness Comparisons": [[22, "dag-generator-for-doing-faithfulness-comparisons"]], "How to generate a workflow": [[22, "how-to-generate-a-workflow"]], "Creating a configuration (.ini) file": [[22, "creating-a-configuration-ini-file"]], "Example config files": [[22, "example-config-files"]], "Performing FFTs in PyCBC": [[23, "performing-ffts-in-pycbc"]], "Using the function based API": [[23, "using-the-function-based-api"]], "Using the class-based API": [[23, "using-the-class-based-api"]], "Choosing a specific backend": [[23, "choosing-a-specific-backend"]], "Method documentation": [[23, "method-documentation"], [26, "method-documentation"], [85, "method-documentation"]], "Filtering": [[24, "filtering"]], "Applying highpass / lowpass filters": [[24, "applying-highpass-lowpass-filters"]], "Applying an FIR filter": [[24, "applying-an-fir-filter"]], "Matched Filter SNR": [[24, "matched-filter-snr"]], "Chisq time series": [[24, "chisq-time-series"]], "HDF files within the PyCBC workflow": [[25, "hdf-files-within-the-pycbc-workflow"]], "single inspiral triggers": [[25, "single-inspiral-triggers"]], "Executables": [[25, "executables"], [25, "id1"]], "Specification": [[25, "specification"], [25, "id2"]], "Column vectors of trigger data": [[25, "id3"], [25, "id6"]], "Additional Data": [[25, "id4"], [25, "id8"]], "reserved columns": [[25, "id5"]], "combined single inspiral triggers": [[25, "combined-single-inspiral-triggers"]], "region reference arrays": [[25, "id7"]], "Example uses": [[25, "example-uses"]], "Reading Gravitational-wave Frames": [[26, "reading-gravitational-wave-frames"]], "Querying a LDR server": [[26, "querying-a-ldr-server"]], "Reading a frame file": [[26, "reading-a-frame-file"]], "Writing a frame file": [[26, "writing-a-frame-file"]], "Index": [[27, "index"]], "Signal Processing with GW150914": [[28, "signal-processing-with-gw150914"]], "Plotting the whitened strain": [[28, "plotting-the-whitened-strain"]], "Calculate the signal-to-noise": [[28, "calculate-the-signal-to-noise"]], "Listen to GW150914 in Hanford": [[28, "listen-to-gw150914-in-hanford"]], "Hardware injection waveform generation": [[29, "hardware-injection-waveform-generation"]], "Contents": [[29, "contents"]], "Generate waveform from command line (pycbc_generate_hwinj)": [[29, "generate-waveform-from-command-line-pycbc-generate-hwinj"]], "Select a time for the injection": [[29, "select-a-time-for-the-injection"]], "Select data for PSD estimation": [[29, "select-data-for-psd-estimation"]], "Run pycbc_generate_hwinj": [[29, "run-pycbc-generate-hwinj"]], "Generate waveform from lalapps_inspinj output (pycbc_generate_hwinj_from_xml)": [[29, "generate-waveform-from-lalapps-inspinj-output-pycbc-generate-hwinj-from-xml"]], "Run lalapps_inspinj": [[29, "run-lalapps-inspinj"]], "Run pycbc_generate_hwinj_from_xml": [[29, "run-pycbc-generate-hwinj-from-xml"]], "Checks for the hardware injection output": [[29, "checks-for-the-hardware-injection-output"]], "Plot ASCII waveform files with pycbc_plot_hwinj": [[29, "plot-ascii-waveform-files-with-pycbc-plot-hwinj"]], "Recover software injection with pycbc_inspiral": [[29, "recover-software-injection-with-pycbc-inspiral"]], "Recover ASCII file injection with pycbc_inspiral": [[29, "recover-ascii-file-injection-with-pycbc-inspiral"]], "How to query the segment database": [[29, "how-to-query-the-segment-database"]], "How to query the LDR server": [[29, "how-to-query-the-ldr-server"]], "PyCBC: Powering Gravitational-wave Astronomy": [[30, "pycbc-powering-gravitational-wave-astronomy"]], "Getting Started": [[30, "getting-started"]], "Installation": [[30, "installation"]], "PyCBC inference documentation (pycbc.inference)": [[31, "pycbc-inference-documentation-pycbc-inference"]], "Overview": [[31, "overview"], [45, "overview"], [80, "overview"], [80, "id1"]], "Configuring the model, sampler, priors, and data": [[31, "configuring-the-model-sampler-priors-and-data"]], "Configuring the model": [[31, "configuring-the-model"]], "Configuring the sampler": [[31, "configuring-the-sampler"]], "Configuring the prior": [[31, "configuring-the-prior"]], "Static parameters": [[31, "static-parameters"]], "Setting data": [[31, "setting-data"]], "Advanced configuration settings": [[31, "advanced-configuration-settings"]], "Waveform transforms": [[31, "waveform-transforms"]], "Calibration parameters": [[31, "calibration-parameters"]], "Constraints": [[31, "constraints"]], "Checkpointing and output files": [[31, "checkpointing-and-output-files"]], "Examples": [[31, "examples"]], "Visualizing the Posteriors": [[31, "visualizing-the-posteriors"]], "Workflows": [[31, "workflows"]], "For Developers": [[31, "for-developers"]], "Running on an analytic distribution": [[32, "running-on-an-analytic-distribution"]], "Simulated BBH example": [[33, "simulated-bbh-example"]], "1. Create the injection": [[33, "create-the-injection"]], "2. Setup the configuration files": [[33, "setup-the-configuration-files"]], "3. Run": [[33, "run"]], "GW150914 example with gaussian noise model": [[34, "gw150914-example-with-gaussian-noise-model"]], "Using the hierarchical model": [[35, "using-the-hierarchical-model"]], "Lensing example": [[35, "lensing-example"]], "LISA SMBHB injection and parameter estimation": [[36, "lisa-smbhb-injection-and-parameter-estimation"]], "LISA parameter estimation for simulated SMBHB from LDC": [[37, "lisa-parameter-estimation-for-simulated-smbhb-from-ldc"]], "Marginalized time model": [[38, "marginalized-time-model"]], "Example with GW150914": [[38, "example-with-gw150914"]], "Using the relative model": [[39, "using-the-relative-model"]], "Trying out different samplers": [[40, "trying-out-different-samplers"]], "Emcee": [[40, "id1"]], "Parallel-tempered Emcee": [[40, "id2"]], "PTEmcee": [[40, "id3"]], "Dynesty": [[40, "id4"]], "Ultranest": [[40, "id5"]], "Epsie": [[40, "id6"]], "cpnest": [[40, "id7"]], "Multinest": [[40, "id8"]], "Using the single template model": [[41, "using-the-single-template-model"]], "Quickstart example": [[41, "quickstart-example"]], "Marginalization subset of parameters": [[41, "marginalization-subset-of-parameters"]], "Marginalization over all parameters": [[41, "marginalization-over-all-parameters"]], "Abitrary sampling coordinates with nested samplers": [[41, "abitrary-sampling-coordinates-with-nested-samplers"]], "Inference IO": [[42, "inference-io"]], "Overview & Guidelines": [[42, "overview-guidelines"], [44, "overview-guidelines"]], "Posterior Files": [[42, "posterior-files"]], "Inheritance diagrams": [[42, "inheritance-diagrams"], [44, "inheritance-diagrams"]], "How to add a sampler IO class": [[42, "how-to-add-a-sampler-io-class"]], "Details of common Models in PyCBC Inference": [[43, "details-of-common-models-in-pycbc-inference"]], "Standard models with full waveform generation": [[43, "standard-models-with-full-waveform-generation"]], "Heterodyne / Relative Models": [[43, "heterodyne-relative-models"]], "Extrinsic Parameter Only Models": [[43, "extrinsic-parameter-only-models"]], "Composite Models": [[43, "composite-models"]], "Sampler API": [[44, "sampler-api"]], "Detailed example": [[44, "detailed-example"]], "How to add a sampler": [[44, "how-to-add-a-sampler"]], "Plotting the posteriors (pycbc_inference_plot_posterior)": [[45, "plotting-the-posteriors-pycbc-inference-plot-posterior"]], "Plotting a specific iteration": [[45, "plotting-a-specific-iteration"]], "Plotting a thinned chain of samples": [[45, "plotting-a-thinned-chain-of-samples"]], "Making a movie (pycbc_inference_plot_movie)": [[45, "making-a-movie-pycbc-inference-plot-movie"]], "Installing PyCBC": [[46, "installing-pycbc"]], "Simple Installation": [[46, "simple-installation"]], "Full Virtualenv for Development and Production": [[46, "full-virtualenv-for-development-and-production"]], "Development build on LDG / IGWN clusters": [[46, "development-build-on-ldg-igwn-clusters"]], "Other scenarios": [[46, "other-scenarios"]], "Docker": [[46, "docker"]], "Building the Documentation": [[46, "building-the-documentation"]], "Use of Intel MKL Optimized FFT libraries": [[46, "use-of-intel-mkl-optimized-fft-libraries"]], "Graphics Processing Unit support with CUDA": [[46, "graphics-processing-unit-support-with-cuda"]], "Related Help": [[46, "related-help"]], "Instructions to add CUDA support (optional)": [[47, "instructions-to-add-cuda-support-optional"]], "Installing the CUDA dependencies": [[47, "installing-the-cuda-dependencies"]], "Installing lalsuite for PyCBC": [[48, "installing-lalsuite-for-pycbc"]], "Obtaining the source code and checking out a version": [[48, "obtaining-the-source-code-and-checking-out-a-version"]], "Building and installing into your virtual environment": [[48, "building-and-installing-into-your-virtual-environment"]], "Additional data files from lalsuite-extra": [[48, "additional-data-files-from-lalsuite-extra"]], "Setting up virtualenv": [[49, "setting-up-virtualenv"]], "Install pip": [[49, "install-pip"]], "Install virtualenv": [[49, "install-virtualenv"]], "pycbc": [[50, "pycbc"]], "Generating Noise": [[51, "generating-noise"]], "Generating time domain Gaussian noise": [[51, "generating-time-domain-gaussian-noise"]], "Handling PSDs": [[52, "handling-psds"]], "Reading / Saving a PSD from a file": [[52, "reading-saving-a-psd-from-a-file"]], "Generating an Analytic PSD from lalsimulation": [[52, "generating-an-analytic-psd-from-lalsimulation"]], "Estimating the PSD of a time series": [[52, "estimating-the-psd-of-a-time-series"]], "pycbc package": [[53, "pycbc-package"]], "Subpackages": [[53, "subpackages"], [60, "subpackages"]], "Submodules": [[53, "submodules"], [54, "submodules"], [55, "submodules"], [56, "submodules"], [57, "submodules"], [58, "submodules"], [59, "submodules"], [60, "submodules"], [61, "submodules"], [62, "submodules"], [63, "submodules"], [64, "submodules"], [65, "submodules"], [66, "submodules"], [67, "submodules"], [68, "submodules"], [69, "submodules"], [70, "submodules"], [71, "submodules"], [72, "submodules"], [73, "submodules"], [74, "submodules"], [75, "submodules"], [76, "submodules"], [77, "submodules"]], "pycbc.bin_utils module": [[53, "module-pycbc.bin_utils"]], "pycbc.boundaries module": [[53, "module-pycbc.boundaries"]], "pycbc.conversions module": [[53, "module-pycbc.conversions"]], "pycbc.coordinates module": [[53, "module-pycbc.coordinates"]], "pycbc.cosmology module": [[53, "module-pycbc.cosmology"]], "pycbc.detector module": [[53, "module-pycbc.detector"]], "pycbc.dq module": [[53, "module-pycbc.dq"]], "pycbc.libutils module": [[53, "module-pycbc.libutils"]], "pycbc.mchirp_area module": [[53, "module-pycbc.mchirp_area"]], "pycbc.opt module": [[53, "module-pycbc.opt"]], "pycbc.pnutils module": [[53, "module-pycbc.pnutils"]], "pycbc.pool module": [[53, "module-pycbc.pool"]], "pycbc.rate module": [[53, "module-pycbc.rate"]], "pycbc.scheme module": [[53, "module-pycbc.scheme"]], "pycbc.sensitivity module": 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"module-pycbc.workflow.matched_filter"]], "pycbc.workflow.minifollowups module": [[77, "module-pycbc.workflow.minifollowups"]], "pycbc.workflow.pegasus_sites module": [[77, "module-pycbc.workflow.pegasus_sites"]], "pycbc.workflow.pegasus_workflow module": [[77, "module-pycbc.workflow.pegasus_workflow"]], "pycbc.workflow.plotting module": [[77, "module-pycbc.workflow.plotting"]], "pycbc.workflow.psd module": [[77, "module-pycbc.workflow.psd"]], "pycbc.workflow.psdfiles module": [[77, "module-pycbc.workflow.psdfiles"]], "pycbc.workflow.segment module": [[77, "module-pycbc.workflow.segment"]], "pycbc.workflow.splittable module": [[77, "module-pycbc.workflow.splittable"]], "pycbc.workflow.tmpltbank module": [[77, "module-pycbc.workflow.tmpltbank"]], "pycbc_condition_strain: operations with strain data files": [[78, "pycbc-condition-strain-operations-with-strain-data-files"]], "Splitting existing data into shorter frame files": [[78, "splitting-existing-data-into-shorter-frame-files"]], "Conditioning existing data": [[78, "conditioning-existing-data"]], "Injecting simulated signals into existing data": [[78, "injecting-simulated-signals-into-existing-data"]], "Simulating gravitational-wave data": [[78, "simulating-gravitational-wave-data"]], "Caveats": [[78, "caveats"]], "Creating Releases of PyCBC": [[79, "creating-releases-of-pycbc"]], "Creating the release on GitHub": [[79, "creating-the-release-on-github"]], "Backporting Bug Fixes to Previous Release Series": [[79, "backporting-bug-fixes-to-previous-release-series"]], "PyCBC template bank generation documentation (pycbc.tmpltbank)": [[80, "pycbc-template-bank-generation-documentation-pycbc-tmpltbank"]], "Non spin bank placement: pycbc_geom_nonspinbank": [[80, "non-spin-bank-placement-pycbc-geom-nonspinbank"]], "Background": [[80, "background"], [80, "id2"], [80, "id6"]], "Some examples": [[80, "some-examples"], [80, "id3"], [80, "id7"]], "Command line options": [[80, "command-line-options"], [80, "id4"]], "Aligned-spin geometric placement: pycbc_geom_aligned_bank": [[80, "aligned-spin-geometric-placement-pycbc-geom-aligned-bank"]], "Aligned-spin stochastic placement": [[80, "aligned-spin-stochastic-placement"]], "Ian\u2019s recommendation: Which stochastic code should I use?": [[80, "ian-s-recommendation-which-stochastic-code-should-i-use"]], "I want to use the F2 metric": [[80, "i-want-to-use-the-f2-metric"]], "I want to use another metric, ie. an IMR metric": [[80, "i-want-to-use-another-metric-ie-an-imr-metric"]], "I want to use direct match": [[80, "i-want-to-use-direct-match"]], "Command line options: pycbc_aligned_stoch_bank": [[80, "command-line-options-pycbc-aligned-stoch-bank"]], "Command line options: lalapps_cbc_sbank": [[80, "command-line-options-lalapps-cbc-sbank"]], "Sbank workflow generator": [[80, "sbank-workflow-generator"]], "Hybrid approaches: the best of both worlds": [[80, "hybrid-approaches-the-best-of-both-worlds"]], "The module\u2019s source code": [[80, "the-module-s-source-code"]], "Library Examples and Interactive Tutorials": [[81, "library-examples-and-interactive-tutorials"]], "Uploading triggers to gracedb": [[82, "uploading-triggers-to-gracedb"]], "Requirements": [[82, "requirements"], [88, "requirements"], [88, "id2"]], "Finding input files": [[82, "finding-input-files"]], "Running the command": [[82, "running-the-command"]], "Waveforms": [[83, "waveforms"]], "What waveforms can I generate?": [[83, "what-waveforms-can-i-generate"]], "Plotting Time Domain Waveforms": [[83, "plotting-time-domain-waveforms"]], "Generating one waveform in multiple detectors": [[83, "generating-one-waveform-in-multiple-detectors"]], "Calculating the match between waveforms": [[83, "calculating-the-match-between-waveforms"]], "Plotting a TD and FD waveform together in the TD": [[83, "plotting-a-td-and-fd-waveform-together-in-the-td"]], "Plotting GW phase and amplitude of TD waveform": [[83, "plotting-gw-phase-and-amplitude-of-td-waveform"]], "Plotting frequency evolution of TD waveform": [[83, "plotting-frequency-evolution-of-td-waveform"]], "Making new waveform approximants available to PyCBC": [[84, "making-new-waveform-approximants-available-to-pycbc"]], "Adding a custom waveform model within a script": [[84, "adding-a-custom-waveform-model-within-a-script"]], "Creating a plugin for PyCBC": [[84, "creating-a-plugin-for-pycbc"]], "Workflow: the inspiral analysis workflow generator (pycbc.workflow)": [[85, "workflow-the-inspiral-analysis-workflow-generator-pycbc-workflow"]], "Workflow module documentation": [[85, "workflow-module-documentation"]], "Basics and overview": [[85, "basics-and-overview"]], "Generating segments": [[85, "generating-segments"]], "Obtaining data": [[85, "obtaining-data"]], "Injection generation": [[85, "injection-generation"]], "Template bank": [[85, "template-bank"]], "Split table": [[85, "split-table"]], "Matched-filtering": [[85, "matched-filtering"]], "Coincidence": [[85, "coincidence"]], "The workflow datafind and validation module": [[86, "the-workflow-datafind-and-validation-module"]], "Usage": [[86, "usage"], [89, "usage"], [90, "usage"], [96, "usage"], [97, "usage"], [98, "usage"]], "Configuration file setup": [[86, "configuration-file-setup"], [89, "configuration-file-setup"], [90, "configuration-file-setup"], [96, "configuration-file-setup"], [97, "configuration-file-setup"], [98, "configuration-file-setup"]], "[workflow-datafind] section": [[86, "workflow-datafind-section"]], "[executables]": [[86, "executables"], [89, "executables"], [90, "executables"], [97, "executables"], [98, "executables"]], "Other sections": [[86, "other-sections"]], "[datafind]": [[86, "datafind"]], "pycbc.workflow.datafind Module": [[86, "pycbc-workflow-datafind-module"]], "HDF5 Based Coincidence Code": [[87, "hdf5-based-coincidence-code"]], "Limitations": [[87, "limitations"]], "Configuration File": [[87, "configuration-file"], [95, "configuration-file"]], "Workflow Configuration": [[87, "workflow-configuration"]], "Executable Configuration": [[87, "executable-configuration"]], "Options to the coincidence/background executable": [[87, "options-to-the-coincidence-background-executable"]], "Options to the coincidence clustering + statistic asignment executable": [[87, "options-to-the-coincidence-clustering-statistic-asignment-executable"]], "Options to the injection finding executable": [[87, "options-to-the-injection-finding-executable"]], "Options for sensitivity plotting": [[87, "options-for-sensitivity-plotting"]], "Pycbc\u2019s workflow module configuration file(s) and command line interface": [[88, "pycbc-s-workflow-module-configuration-file-s-and-command-line-interface"]], "Supplying the config file on the command line and overriding options": [[88, "supplying-the-config-file-on-the-command-line-and-overriding-options"]], "Example": [[88, "example"], [88, "id1"], [88, "id3"]], "Global options - the [workflow] section": [[88, "global-options-the-workflow-section"]], "[workflow-XXX] subsections": [[88, "workflow-xxx-subsections"]], "Executable locations - the [executables] section": [[88, "executable-locations-the-executables-section"]], "executable macros": [[88, "executable-macros"]], "which(executable)": [[88, "which-executable"]], "Executable options": [[88, "executable-options"]], "Example complete workflow .ini file": [[88, "example-complete-workflow-ini-file"]], "[sharedoptions] section": [[88, "sharedoptions-section"]], "Code documentation": [[88, "code-documentation"]], "pycbc.workflow.configuration Module": [[88, "pycbc-workflow-configuration-module"]], "The workflow injection generation module": [[89, "the-workflow-injection-generation-module"]], "[workflow-injections] section": [[89, "workflow-injections-section"]], "Supported injection executables and instructions for using them": [[89, "supported-injection-executables-and-instructions-for-using-them"]], "lalapps_inspinj": [[89, "lalapps-inspinj"]], "pycbc.workflow.injection Module": [[89, "pycbc-workflow-injection-module"]], "The workflow matched-filter module": [[90, "the-workflow-matched-filter-module"]], "[workflow-matchedfilter] section": [[90, "workflow-matchedfilter-section"]], "Supported inspiral trigger generators and instructions for using them": [[90, "supported-inspiral-trigger-generators-and-instructions-for-using-them"]], "lalapps_inspiral_ahope": [[90, "lalapps-inspiral-ahope"]], "pycbc_inspiral": [[90, "pycbc-inspiral"]], "pycbc.workflow.matched_filter Module": [[90, "pycbc-workflow-matched-filter-module"]], "pycbc_make_inference_inj_workflow: A parameter estimation workflow generator for injections": [[91, "pycbc-make-inference-inj-workflow-a-parameter-estimation-workflow-generator-for-injections"]], "Example: BBH injections with dynesty": [[91, "example-bbh-injections-with-dynesty"]], "Get the inference configuration files": [[91, "get-the-inference-configuration-files"], [92, "get-the-inference-configuration-files"]], "Setup the workflow configuration file": [[91, "setup-the-workflow-configuration-file"], [92, "setup-the-workflow-configuration-file"]], "Generate the workflow": [[91, "generate-the-workflow"], [92, "generate-the-workflow"], [95, "generate-the-workflow"]], "Plan and execute the workflow": [[91, "plan-and-execute-the-workflow"], [92, "plan-and-execute-the-workflow"]], "Results page": [[91, "results-page"], [92, "results-page"]], "pycbc_make_inference_workflow: A parameter estimation workflow generator": [[92, "pycbc-make-inference-workflow-a-parameter-estimation-workflow-generator"]], "Example: GW150914 and GW170814 with emcee_pt": [[92, "example-gw150914-and-gw170814-with-emcee-pt"]], "Example: GW150914 and GW170814 with dynesty": [[92, "example-gw150914-and-gw170814-with-dynesty"]], "pycbc_make_offline_search_workflow: A workflow to search for gravitational waves": [[93, "pycbc-make-offline-search-workflow-a-workflow-to-search-for-gravitational-waves"]], "Configuration file": [[93, "configuration-file"], [94, "configuration-file"]], "Planning and Submitting the Workflow": [[93, "planning-and-submitting-the-workflow"], [95, "planning-and-submitting-the-workflow"]], "Monitor and Debug the Workflow (Detailed Pegasus Documentation)": [[93, "monitor-and-debug-the-workflow-detailed-pegasus-documentation"], [95, "monitor-and-debug-the-workflow-detailed-pegasus-documentation"]], "Pegasus Dashboard": [[93, "pegasus-dashboard"], [95, "pegasus-dashboard"]], "Pegasus Analyzer": [[93, "pegasus-analyzer"]], "Reuse of data from a previous workflow": [[93, "reuse-of-data-from-a-previous-workflow"], [95, "reuse-of-data-from-a-previous-workflow"]], "Setting up a workflow for data reuse": [[93, "setting-up-a-workflow-for-data-reuse"]], "Extending the GPS end time of a previous workflow": [[93, "extending-the-gps-end-time-of-a-previous-workflow"]], "Re-running a workflow using a new veto definer file": [[93, "re-running-a-workflow-using-a-new-veto-definer-file"]], "Re-running a failed workflow": [[93, "re-running-a-failed-workflow"]], "Using partial products from a previous workflow": [[93, "using-partial-products-from-a-previous-workflow"]], "Running on the Open Science Grid": [[93, "running-on-the-open-science-grid"]], "Prerequisites": [[93, "prerequisites"]], "Configuring the workflow": [[93, "configuring-the-workflow"]], "Running the workflow": [[93, "running-the-workflow"]], "pycbc_make_psd_estimation_workflow: A workflow generator for noise estimation": [[94, "pycbc-make-psd-estimation-workflow-a-workflow-generator-for-noise-estimation"]], "Generating and running the workflow": [[94, "generating-and-running-the-workflow"]], "pycbc_make_offline_grb_workflow: A GRB triggered CBC analysis workflow generator": [[95, "pycbc-make-offline-grb-workflow-a-grb-triggered-cbc-analysis-workflow-generator"]], "Workflow Sections": [[95, "workflow-sections"]], "Executable Sections": [[95, "executable-sections"]], "Pegasus Profile Sections": [[95, "pegasus-profile-sections"]], "How to run": [[95, "how-to-run"]], "Set up a run directory": [[95, "set-up-a-run-directory"]], "Configuration files - Are you running from production configuration (.ini) files?": [[95, "configuration-files-are-you-running-from-production-configuration-ini-files"]], "Yes, I want to run in a standard production configuration": [[95, "yes-i-want-to-run-in-a-standard-production-configuration"]], "No, I have my own configuration files": [[95, "no-i-have-my-own-configuration-files"]], "Pegasus Plots": [[95, "pegasus-plots"]], "Generate the full workflow you want to do": [[95, "generate-the-full-workflow-you-want-to-do"]], "Select the files you want to reuse from the prior run": [[95, "select-the-files-you-want-to-reuse-from-the-prior-run"]], "Plan the workflow": [[95, "plan-the-workflow"]], "The workflow segment generation module": [[96, "the-workflow-segment-generation-module"]], "Example config file": [[96, "example-config-file"]], "Description of the ini file contents": [[96, "description-of-the-ini-file-contents"]], "Flag syntax": [[96, "flag-syntax"]], "Version numbers": [[96, "version-numbers"]], "The veto-definer file": [[96, "the-veto-definer-file"]], "Adding a ifo": [[96, "adding-a-ifo"]], "Providing padding": [[96, "providing-padding"]], "Providing valid times": [[96, "providing-valid-times"]], "Obtaining segments from pre-existing XML files": [[96, "obtaining-segments-from-pre-existing-xml-files"]], "pycbc.workflow.segment Module": [[96, "pycbc-workflow-segment-module"]], "The workflow table splitting module": [[97, "the-workflow-table-splitting-module"]], "[workflow-splittable] section": [[97, "workflow-splittable-section"]], "Supported splittable executables and instructions for using them": [[97, "supported-splittable-executables-and-instructions-for-using-them"]], "pycbc_splitbank": [[97, "pycbc-splitbank"]], "pycbc.workflow.splittable Module": [[97, "pycbc-workflow-splittable-module"]], "The workflow template bank generation module": [[98, "the-workflow-template-bank-generation-module"]], "[workflow-tmpltbank] section": [[98, "workflow-tmpltbank-section"]], "Supported template bank exes and instructions for using them": [[98, "supported-template-bank-exes-and-instructions-for-using-them"]], "lalapps_tmpltbank_ahope": [[98, "lalapps-tmpltbank-ahope"]], "pycbc_geom_nonspinbank": [[98, "pycbc-geom-nonspinbank"]], "pycbc.workflow.tmpltbank Module": [[98, "pycbc-workflow-tmpltbank-module"]]}, "indexentries": {"a0() (in module pycbc.pnutils)": [[53, "pycbc.pnutils.A0"]], "a3() (in module pycbc.pnutils)": [[53, "pycbc.pnutils.A3"]], "aligntotalspin (class in pycbc.transforms)": [[53, "pycbc.transforms.AlignTotalSpin"]], "alignedmassspintocartesianspin (class in pycbc.transforms)": [[53, "pycbc.transforms.AlignedMassSpinToCartesianSpin"]], "basetransform (class in pycbc.transforms)": [[53, "pycbc.transforms.BaseTransform"]], "binnedarray (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.BinnedArray"]], "binnedratios (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.BinnedRatios"]], "bins (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.Bins"]], "bounds (class in pycbc.boundaries)": [[53, "pycbc.boundaries.Bounds"]], "broadcastpool (class in pycbc.pool)": [[53, "pycbc.pool.BroadcastPool"]], "cpuscheme (class in pycbc.scheme)": [[53, "pycbc.scheme.CPUScheme"]], "cudascheme (class in pycbc.scheme)": [[53, "pycbc.scheme.CUDAScheme"]], "cartesianspin1tosphericalspin1 (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianSpin1ToSphericalSpin1"]], "cartesianspin2tosphericalspin2 (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianSpin2ToSphericalSpin2"]], "cartesianspintoalignedmassspin (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianSpinToAlignedMassSpin"]], "cartesianspintochip (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianSpinToChiP"]], "cartesianspintoprecessionmassspin (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianSpinToPrecessionMassSpin"]], "cartesiantospherical (class in pycbc.transforms)": [[53, "pycbc.transforms.CartesianToSpherical"]], "chiptocartesianspin (class in pycbc.transforms)": [[53, "pycbc.transforms.ChiPToCartesianSpin"]], "chirpdistancetodistance (class in pycbc.transforms)": [[53, "pycbc.transforms.ChirpDistanceToDistance"]], "choosebyschemedict (class in pycbc.scheme)": [[53, "pycbc.scheme.ChooseBySchemeDict"]], "closedbound (class in pycbc.boundaries)": [[53, "pycbc.boundaries.ClosedBound"]], "customtransform (class in pycbc.transforms)": [[53, "pycbc.transforms.CustomTransform"]], "defaultscheme (class in pycbc.scheme)": [[53, "pycbc.scheme.DefaultScheme"]], "detector (class in pycbc.detector)": [[53, "pycbc.detector.Detector"]], "distancetochirpdistance (class in pycbc.transforms)": [[53, "pycbc.transforms.DistanceToChirpDistance"]], "distancetoredshift (class in pycbc.transforms)": [[53, "pycbc.transforms.DistanceToRedshift"]], "exponent (class in pycbc.transforms)": [[53, "pycbc.transforms.Exponent"]], "irregularbins (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.IrregularBins"]], "lisa (class in pycbc.detector)": [[53, "pycbc.detector.LISA"]], "lambdafrommultipletovfiles (class in pycbc.transforms)": [[53, "pycbc.transforms.LambdaFromMultipleTOVFiles"]], "lambdafromtovfile (class in pycbc.transforms)": [[53, "pycbc.transforms.LambdaFromTOVFile"]], "limitedsizedict (class in pycbc.opt)": [[53, "pycbc.opt.LimitedSizeDict"]], "linearbins (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.LinearBins"]], "linearplusoverflowbins (class in pycbc.bin_utils)": [[53, "pycbc.bin_utils.LinearPlusOverflowBins"]], "log (class in pycbc.transforms)": [[53, "pycbc.transforms.Log"]], "logformatter (class in pycbc)": [[53, "pycbc.LogFormatter"]], "logarithmicbins (class in 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"pycbc.boundaries.OpenBound"]], "precessionmassspintocartesianspin (class in pycbc.transforms)": [[53, "pycbc.transforms.PrecessionMassSpinToCartesianSpin"]], "reflectedbound (class in pycbc.boundaries)": [[53, "pycbc.boundaries.ReflectedBound"]], "scheme (class in pycbc.scheme)": [[53, "pycbc.scheme.Scheme"]], "singlepool (class in pycbc.pool)": [[53, "pycbc.pool.SinglePool"]], "sphericalspin1tocartesianspin1 (class in pycbc.transforms)": [[53, "pycbc.transforms.SphericalSpin1ToCartesianSpin1"]], "sphericalspin2tocartesianspin2 (class in pycbc.transforms)": [[53, "pycbc.transforms.SphericalSpin2ToCartesianSpin2"]], "sphericaltocartesian (class in pycbc.transforms)": [[53, "pycbc.transforms.SphericalToCartesian"]], "add_detector_on_earth() (in module pycbc.detector)": [[53, "pycbc.detector.add_detector_on_earth"]], "allmap() (pycbc.pool.broadcastpool method)": [[53, "pycbc.pool.BroadcastPool.allmap"]], "antenna_pattern() (pycbc.detector.detector method)": [[53, "pycbc.detector.Detector.antenna_pattern"]], "apply_conditions() (pycbc.boundaries.bounds method)": [[53, "pycbc.boundaries.Bounds.apply_conditions"]], "apply_cyclic() (in module pycbc.boundaries)": [[53, "pycbc.boundaries.apply_cyclic"]], "apply_transforms() (in module pycbc.transforms)": [[53, "pycbc.transforms.apply_transforms"]], "argmax() (pycbc.bin_utils.binnedarray method)": [[53, "pycbc.bin_utils.BinnedArray.argmax"]], "argmin() (pycbc.bin_utils.binnedarray method)": [[53, "pycbc.bin_utils.BinnedArray.argmin"]], "bins() (pycbc.bin_utils.binnedratios method)": [[53, "pycbc.bin_utils.BinnedRatios.bins"]], "bounds (pycbc.transforms.logistic property)": [[53, "pycbc.transforms.Logistic.bounds"]], "bounds (pycbc.transforms.logit property)": [[53, "pycbc.transforms.Logit.bounds"]], "broadcast() (pycbc.pool.broadcastpool method)": [[53, "pycbc.pool.BroadcastPool.broadcast"]], "broadcast() (pycbc.pool.singlepool method)": [[53, "pycbc.pool.SinglePool.broadcast"]], "calc_areas() (in 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18, 20, 23, 24, 29, 31, 33, 34, 38, 41, 42, 43, 44, 46, 48, 49, 53, 55, 56, 58, 60, 61, 62, 63, 64, 65, 66, 67, 72, 73, 74, 76, 77, 80, 82, 84, 86, 88, 90, 91, 92, 93, 96], "acceler": [10, 46, 47, 70, 90], "process": [10, 12, 16, 29, 37, 38, 42, 44, 48, 49, 53, 58, 60, 64, 66, 69, 73, 76, 77, 80, 81, 82, 83, 84, 86, 87, 90, 92, 93, 94, 96], "treat": [10, 35, 43, 53, 58, 60, 63, 91, 92, 93], "unreli": 10, "As": [10, 23, 29, 31, 33, 42, 44, 47, 53, 55, 56, 60, 61, 76, 77, 80, 86, 88, 91, 92, 95, 96, 97, 98], "automat": [10, 20, 22, 43, 63, 72, 74, 77, 78, 80, 84, 88, 89, 90, 91, 92, 96, 98], "twice": [10, 58, 72, 73, 88, 92], "kept": [10, 29, 31, 44, 74, 77, 93], "thei": [10, 23, 29, 31, 33, 35, 44, 52, 53, 55, 57, 60, 61, 63, 64, 66, 70, 72, 73, 74, 76, 77, 78, 80, 87, 88, 91, 92, 93, 94, 96, 98], "equivel": 10, "sugar": [10, 56, 93], "atla": [10, 34, 91, 92, 93], "simul": [10, 22, 31, 34, 35, 36, 38, 65, 69, 73, 76, 77, 89, 90, 91, 94, 96], "ldg": [10, 22, 48, 80, 86, 91, 92, 93], 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25, 26, 29, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 46, 48, 49, 53, 55, 60, 63, 64, 65, 66, 71, 72, 73, 77, 78, 79, 80, 82, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98], "command": [10, 11, 12, 19, 20, 22, 23, 31, 45, 46, 47, 48, 49, 53, 55, 56, 57, 60, 61, 63, 65, 72, 73, 74, 77, 78, 85, 86, 89, 90, 91, 92, 93, 95, 97, 98], "submit": [10, 22, 77, 80, 91, 92], "pycbc_make_banksim": 10, "conf": [10, 16, 22, 86], "your_ini_fil": [10, 22], "ini": [10, 32, 33, 34, 35, 36, 37, 38, 39, 41, 55, 70, 74, 77, 80, 81, 87, 89, 91, 92, 93, 94, 98], "shell": [10, 12, 19, 22, 47, 48, 49, 53, 77, 93], "sh": [10, 12, 22, 32, 33, 34, 36, 37, 46, 48, 63, 91, 92], "main": [10, 11, 22, 36, 42, 44, 46, 53, 80, 91, 93, 95], "call": [10, 11, 23, 29, 31, 32, 35, 37, 38, 39, 41, 44, 45, 48, 52, 53, 55, 56, 57, 58, 60, 61, 62, 63, 64, 65, 66, 69, 70, 71, 72, 73, 74, 76, 77, 80, 83, 84, 86, 88, 89, 90, 92, 93, 94, 95, 96, 97, 98], "dat": 10, "space": [10, 12, 23, 29, 31, 33, 41, 43, 52, 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95, "cbc": 95, "profil": 95, "directori": 95, "ar": 95, "you": 95, "ye": 95, "No": 95, "my": 95, "own": 95, "descript": 96, "syntax": 96, "number": 96, "ifo": 96, "provid": 96, "pad": 96, "pre": 96, "xml": 96, "pycbc_splitbank": 97, "ex": 98, "lalapps_tmpltbank_ahop": 98}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx.ext.viewcode": 1, "sphinx": 57}, "alltitles": {"Applications and Workflows": [[9, "applications-and-workflows"]], "Calculating the Effectualness (Fitting Factor) of Template Banks": [[10, "calculating-the-effectualness-fitting-factor-of-template-banks"]], "Introduction": [[10, "introduction"], [22, "introduction"], [23, "introduction"], [26, "introduction"], [29, "introduction"], [31, "introduction"], [80, "introduction"], [80, "id5"], [82, "introduction"], [85, "introduction"], [86, "introduction"], [87, "introduction"], [88, "introduction"], [89, "introduction"], [90, "introduction"], [91, "introduction"], [92, "introduction"], [93, "introduction"], [95, "introduction"], [96, "introduction"], [97, "introduction"], [98, "introduction"]], "Creating a configuration file": [[10, "creating-a-configuration-file"]], "Generating the workflow": [[10, "generating-the-workflow"], [22, "generating-the-workflow"], [93, "generating-the-workflow"]], "Understanding the results": [[10, "understanding-the-results"], [22, "understanding-the-results"]], "Validating template banks for production analysis": [[10, "validating-template-banks-for-production-analysis"]], "Procedure": [[10, "procedure"]], "Evaluation": [[10, "evaluation"]], "Known issues": [[10, "known-issues"]], "Building Documentation for GitHub Pages": [[11, "building-documentation-for-github-pages"]], "Creating a GitHub project page": [[11, "creating-a-github-project-page"]], "Building and pushing the documentation": [[11, "building-and-pushing-the-documentation"]], "Building Bundled Executables": [[12, "building-bundled-executables"]], "Using the build script": [[12, "using-the-build-script"]], "Building Releases for CVMFS": [[12, "building-releases-for-cvmfs"]], "Catalog of Observed Gravitational-wave Mergers": [[13, "catalog-of-observed-gravitational-wave-mergers"]], "Which mergers do we have information about?": [[13, "which-mergers-do-we-have-information-about"]], "Plotting some key statistics from the catalog": [[13, "plotting-some-key-statistics-from-the-catalog"]], "Accessing data around each event": [[13, "accessing-data-around-each-event"]], "Use of PyCBC in Scientific Publications": [[14, "use-of-pycbc-in-scientific-publications"]], "Citing the PyCBC Software": [[14, "citing-the-pycbc-software"]], "Citing the scientific publications that describe the algorithms": [[14, "citing-the-scientific-publications-that-describe-the-algorithms"]], "Bayesian Inference": [[14, "bayesian-inference"]], "Searches for Compact Binary Coalescence": [[14, "searches-for-compact-binary-coalescence"]], "Query times of valid data, hardware injections, and more.": [[15, "query-times-of-valid-data-hardware-injections-and-more"]], "Determine the times an instrument has valid data": [[15, "determine-the-times-an-instrument-has-valid-data"]], "Finding times of hardware injections": [[15, "finding-times-of-hardware-injections"]], "What flags can I query?": [[15, "what-flags-can-i-query"]], "Gravitational-wave Detectors": [[16, "gravitational-wave-detectors"]], "Detector Locations": [[16, "detector-locations"]], "Light travel time between detectors": [[16, "light-travel-time-between-detectors"]], "Time source gravitational-wave passes through detector": [[16, "time-source-gravitational-wave-passes-through-detector"]], "Antenna Patterns and Projecting a Signal into the Detector Frame": [[16, "antenna-patterns-and-projecting-a-signal-into-the-detector-frame"]], "Documentation for Developers": [[17, "documentation-for-developers"]], "Using PyCBC Distributions from PyCBC Inference": [[18, "using-pycbc-distributions-from-pycbc-inference"]], "Generating samples in a Python script by using the .ini file": [[18, "generating-samples-in-a-python-script-by-using-the-ini-file"]], "Making Mass Distributions in M1 and M2": [[18, "making-mass-distributions-in-m1-and-m2"]], "Generating mchirp and q from uniform mass1 and mass2": [[18, "generating-mchirp-and-q-from-uniform-mass1-and-mass2"]], "Sky Location Distribution as Spin Distribution Example": [[18, "sky-location-distribution-as-spin-distribution-example"]], "Running PyCBC under Docker": [[19, "running-pycbc-under-docker"]], "Using jupyter notebook within docker": [[19, "using-jupyter-notebook-within-docker"]], "Sharing user files and SSH keys": [[19, "sharing-user-files-and-ssh-keys"]], "Documenting PyCBC code": [[20, "documenting-pycbc-code"]], "Sphinx": [[20, "sphinx"]], "Documenting the PyCBC package": [[20, "documenting-the-pycbc-package"]], "Documenting PyCBC modules": [[20, "documenting-pycbc-modules"]], "Documenting PyCBC scripts": [[20, "documenting-pycbc-scripts"]], "Extending PyCBC with external plugins": [[21, "extending-pycbc-with-external-plugins"]], "Dag Generator for Doing Faithfulness Comparisons": [[22, "dag-generator-for-doing-faithfulness-comparisons"]], "How to generate a workflow": [[22, "how-to-generate-a-workflow"]], "Creating a configuration (.ini) file": [[22, "creating-a-configuration-ini-file"]], "Example config files": [[22, "example-config-files"]], "Performing FFTs in PyCBC": [[23, "performing-ffts-in-pycbc"]], "Using the function based API": [[23, "using-the-function-based-api"]], "Using the class-based API": [[23, "using-the-class-based-api"]], "Choosing a specific backend": [[23, "choosing-a-specific-backend"]], "Method documentation": [[23, "method-documentation"], [26, "method-documentation"], [85, "method-documentation"]], "Filtering": [[24, "filtering"]], "Applying highpass / lowpass filters": [[24, "applying-highpass-lowpass-filters"]], "Applying an FIR filter": [[24, "applying-an-fir-filter"]], "Matched Filter SNR": [[24, "matched-filter-snr"]], "Chisq time series": [[24, "chisq-time-series"]], "HDF files within the PyCBC workflow": [[25, "hdf-files-within-the-pycbc-workflow"]], "single inspiral triggers": [[25, "single-inspiral-triggers"]], "Executables": [[25, "executables"], [25, "id1"]], "Specification": [[25, "specification"], [25, "id2"]], "Column vectors of trigger data": [[25, "id3"], [25, "id6"]], "Additional Data": [[25, "id4"], [25, "id8"]], "reserved columns": [[25, "id5"]], "combined single inspiral triggers": [[25, "combined-single-inspiral-triggers"]], "region reference arrays": [[25, "id7"]], "Example uses": [[25, "example-uses"]], "Reading Gravitational-wave Frames": [[26, "reading-gravitational-wave-frames"]], "Querying a LDR server": [[26, "querying-a-ldr-server"]], "Reading a frame file": [[26, "reading-a-frame-file"]], "Writing a frame file": [[26, "writing-a-frame-file"]], "Index": [[27, "index"]], "Signal Processing with GW150914": [[28, "signal-processing-with-gw150914"]], "Plotting the whitened strain": [[28, "plotting-the-whitened-strain"]], "Calculate the signal-to-noise": [[28, "calculate-the-signal-to-noise"]], "Listen to GW150914 in Hanford": [[28, "listen-to-gw150914-in-hanford"]], "Hardware injection waveform generation": [[29, "hardware-injection-waveform-generation"]], "Contents": [[29, "contents"]], "Generate waveform from command line (pycbc_generate_hwinj)": [[29, "generate-waveform-from-command-line-pycbc-generate-hwinj"]], "Select a time for the injection": [[29, "select-a-time-for-the-injection"]], "Select data for PSD estimation": [[29, "select-data-for-psd-estimation"]], "Run pycbc_generate_hwinj": [[29, "run-pycbc-generate-hwinj"]], "Generate waveform from lalapps_inspinj output (pycbc_generate_hwinj_from_xml)": [[29, "generate-waveform-from-lalapps-inspinj-output-pycbc-generate-hwinj-from-xml"]], "Run lalapps_inspinj": [[29, "run-lalapps-inspinj"]], "Run pycbc_generate_hwinj_from_xml": [[29, "run-pycbc-generate-hwinj-from-xml"]], "Checks for the hardware injection output": [[29, "checks-for-the-hardware-injection-output"]], "Plot ASCII waveform files with pycbc_plot_hwinj": [[29, "plot-ascii-waveform-files-with-pycbc-plot-hwinj"]], "Recover software injection with pycbc_inspiral": [[29, "recover-software-injection-with-pycbc-inspiral"]], "Recover ASCII file injection with pycbc_inspiral": [[29, "recover-ascii-file-injection-with-pycbc-inspiral"]], "How to query the segment database": [[29, "how-to-query-the-segment-database"]], "How to query the LDR server": [[29, "how-to-query-the-ldr-server"]], "PyCBC: Powering Gravitational-wave Astronomy": [[30, "pycbc-powering-gravitational-wave-astronomy"]], "Getting Started": [[30, "getting-started"]], "Installation": [[30, "installation"]], "PyCBC inference documentation (pycbc.inference)": [[31, "pycbc-inference-documentation-pycbc-inference"]], "Overview": [[31, "overview"], [45, "overview"], [80, "overview"], [80, "id1"]], "Configuring the model, sampler, priors, and data": [[31, "configuring-the-model-sampler-priors-and-data"]], "Configuring the model": [[31, "configuring-the-model"]], "Configuring the sampler": [[31, "configuring-the-sampler"]], "Configuring the prior": [[31, "configuring-the-prior"]], "Static parameters": [[31, "static-parameters"]], "Setting data": [[31, "setting-data"]], "Advanced configuration settings": [[31, "advanced-configuration-settings"]], "Waveform transforms": [[31, "waveform-transforms"]], "Calibration parameters": [[31, "calibration-parameters"]], "Constraints": [[31, "constraints"]], "Checkpointing and output files": [[31, "checkpointing-and-output-files"]], "Examples": [[31, "examples"]], "Visualizing the Posteriors": [[31, "visualizing-the-posteriors"]], "Workflows": [[31, "workflows"]], "For Developers": [[31, "for-developers"]], "Running on an analytic distribution": [[32, "running-on-an-analytic-distribution"]], "Simulated BBH example": [[33, "simulated-bbh-example"]], "1. Create the injection": [[33, "create-the-injection"]], "2. Setup the configuration files": [[33, "setup-the-configuration-files"]], "3. Run": [[33, "run"]], "GW150914 example with gaussian noise model": [[34, "gw150914-example-with-gaussian-noise-model"]], "Using the hierarchical model": [[35, "using-the-hierarchical-model"]], "Lensing example": [[35, "lensing-example"]], "LISA SMBHB injection and parameter estimation": [[36, "lisa-smbhb-injection-and-parameter-estimation"]], "LISA parameter estimation for simulated SMBHB from LDC": [[37, "lisa-parameter-estimation-for-simulated-smbhb-from-ldc"]], "Marginalized time model": [[38, "marginalized-time-model"]], "Example with GW150914": [[38, "example-with-gw150914"]], "Using the relative model": [[39, "using-the-relative-model"]], "Trying out different samplers": [[40, "trying-out-different-samplers"]], "Emcee": [[40, "id1"]], "Parallel-tempered Emcee": [[40, "id2"]], "PTEmcee": [[40, "id3"]], "Dynesty": [[40, "id4"]], "Ultranest": [[40, "id5"]], "Epsie": [[40, "id6"]], "cpnest": [[40, "id7"]], "Multinest": [[40, "id8"]], "Using the single template model": [[41, "using-the-single-template-model"]], "Quickstart example": [[41, "quickstart-example"]], "Marginalization subset of parameters": [[41, "marginalization-subset-of-parameters"]], "Marginalization over all parameters": [[41, "marginalization-over-all-parameters"]], "Abitrary sampling coordinates with nested samplers": [[41, "abitrary-sampling-coordinates-with-nested-samplers"]], "Inference IO": [[42, "inference-io"]], "Overview & Guidelines": [[42, "overview-guidelines"], [44, "overview-guidelines"]], "Posterior Files": [[42, "posterior-files"]], "Inheritance diagrams": [[42, "inheritance-diagrams"], [44, "inheritance-diagrams"]], "How to add a sampler IO class": [[42, "how-to-add-a-sampler-io-class"]], "Details of common Models in PyCBC Inference": [[43, "details-of-common-models-in-pycbc-inference"]], "Standard models with full waveform generation": [[43, "standard-models-with-full-waveform-generation"]], "Heterodyne / Relative Models": [[43, "heterodyne-relative-models"]], "Extrinsic Parameter Only Models": [[43, "extrinsic-parameter-only-models"]], "Composite Models": [[43, "composite-models"]], "Sampler API": [[44, "sampler-api"]], "Detailed example": [[44, "detailed-example"]], "How to add a sampler": [[44, "how-to-add-a-sampler"]], "Plotting the posteriors (pycbc_inference_plot_posterior)": [[45, "plotting-the-posteriors-pycbc-inference-plot-posterior"]], "Plotting a specific iteration": [[45, "plotting-a-specific-iteration"]], "Plotting a thinned chain of samples": [[45, "plotting-a-thinned-chain-of-samples"]], "Making a movie (pycbc_inference_plot_movie)": [[45, "making-a-movie-pycbc-inference-plot-movie"]], "Installing PyCBC": [[46, "installing-pycbc"]], "Simple Installation": [[46, "simple-installation"]], "Full Virtualenv for Development and Production": [[46, "full-virtualenv-for-development-and-production"]], "Development build on LDG / IGWN clusters": [[46, "development-build-on-ldg-igwn-clusters"]], "Other scenarios": [[46, "other-scenarios"]], "Docker": [[46, "docker"]], "Building the Documentation": [[46, "building-the-documentation"]], "Use of Intel MKL Optimized FFT libraries": [[46, "use-of-intel-mkl-optimized-fft-libraries"]], "Graphics Processing Unit support with CUDA": [[46, "graphics-processing-unit-support-with-cuda"]], "Related Help": [[46, "related-help"]], "Instructions to add CUDA support (optional)": [[47, "instructions-to-add-cuda-support-optional"]], "Installing the CUDA dependencies": [[47, "installing-the-cuda-dependencies"]], "Installing lalsuite for PyCBC": [[48, "installing-lalsuite-for-pycbc"]], "Obtaining the source code and checking out a version": [[48, "obtaining-the-source-code-and-checking-out-a-version"]], "Building and installing into your virtual environment": [[48, "building-and-installing-into-your-virtual-environment"]], "Additional data files from lalsuite-extra": [[48, "additional-data-files-from-lalsuite-extra"]], "Setting up virtualenv": [[49, "setting-up-virtualenv"]], "Install pip": [[49, "install-pip"]], "Install virtualenv": [[49, "install-virtualenv"]], "pycbc": [[50, "pycbc"]], "Generating Noise": [[51, "generating-noise"]], "Generating time domain Gaussian noise": [[51, "generating-time-domain-gaussian-noise"]], "Handling PSDs": [[52, "handling-psds"]], "Reading / Saving a PSD from a file": [[52, "reading-saving-a-psd-from-a-file"]], "Generating an Analytic PSD from lalsimulation": [[52, "generating-an-analytic-psd-from-lalsimulation"]], "Estimating the PSD of a time series": [[52, "estimating-the-psd-of-a-time-series"]], "pycbc package": [[53, "pycbc-package"]], "Subpackages": [[53, "subpackages"], [60, "subpackages"]], "Submodules": [[53, "submodules"], [54, "submodules"], [55, "submodules"], [56, "submodules"], [57, "submodules"], [58, "submodules"], [59, "submodules"], [60, "submodules"], [61, "submodules"], [62, "submodules"], [63, "submodules"], [64, "submodules"], [65, "submodules"], [66, "submodules"], [67, "submodules"], [68, "submodules"], [69, "submodules"], [70, "submodules"], [71, "submodules"], [72, "submodules"], [73, "submodules"], [74, "submodules"], [75, "submodules"], [76, "submodules"], [77, "submodules"]], "pycbc.bin_utils module": [[53, "module-pycbc.bin_utils"]], "pycbc.boundaries module": [[53, "module-pycbc.boundaries"]], "pycbc.conversions module": [[53, "module-pycbc.conversions"]], "pycbc.coordinates module": [[53, "module-pycbc.coordinates"]], "pycbc.cosmology module": [[53, "module-pycbc.cosmology"]], "pycbc.detector module": [[53, "module-pycbc.detector"]], "pycbc.dq module": [[53, "module-pycbc.dq"]], "pycbc.libutils module": [[53, "module-pycbc.libutils"]], "pycbc.mchirp_area module": [[53, "module-pycbc.mchirp_area"]], "pycbc.opt module": [[53, "module-pycbc.opt"]], "pycbc.pnutils module": [[53, "module-pycbc.pnutils"]], "pycbc.pool module": [[53, "module-pycbc.pool"]], "pycbc.rate module": [[53, "module-pycbc.rate"]], "pycbc.scheme module": [[53, "module-pycbc.scheme"]], "pycbc.sensitivity module": [[53, "module-pycbc.sensitivity"]], "pycbc.transforms module": [[53, "module-pycbc.transforms"]], "pycbc.version module": [[53, "module-pycbc.version"]], "Module contents": [[53, "module-pycbc"], [54, "module-pycbc.catalog"], [55, "module-pycbc.distributions"], [56, "module-pycbc.events"], [57, "module-pycbc.fft"], [58, "module-pycbc.filter"], [59, "module-pycbc.frame"], [60, "module-pycbc.inference"], [61, "module-pycbc.inference.io"], [62, "module-pycbc.inference.jump"], [63, "module-pycbc.inference.models"], [64, "module-pycbc.inference.sampler"], [65, "module-pycbc.inject"], [66, "module-pycbc.io"], [67, "module-pycbc.neutron_stars"], [68, "module-pycbc.noise"], [69, "module-pycbc.population"], [70, "module-pycbc.psd"], [71, "module-pycbc.results"], [72, "module-pycbc.strain"], [73, "module-pycbc.tmpltbank"], [74, "module-pycbc.types"], [75, "module-pycbc.vetoes"], [76, "module-pycbc.waveform"], [77, "module-pycbc.workflow"]], "pycbc.catalog package": [[54, "pycbc-catalog-package"]], "pycbc.catalog.catalog module": [[54, "module-pycbc.catalog.catalog"]], "pycbc.distributions package": [[55, "pycbc-distributions-package"]], "pycbc.distributions.angular module": [[55, "module-pycbc.distributions.angular"]], "pycbc.distributions.arbitrary module": [[55, "module-pycbc.distributions.arbitrary"]], "pycbc.distributions.bounded module": [[55, "module-pycbc.distributions.bounded"]], "pycbc.distributions.constraints module": [[55, "module-pycbc.distributions.constraints"]], "pycbc.distributions.external module": [[55, "module-pycbc.distributions.external"]], "pycbc.distributions.fixedsamples module": [[55, "module-pycbc.distributions.fixedsamples"]], "pycbc.distributions.gaussian module": [[55, "module-pycbc.distributions.gaussian"]], "pycbc.distributions.joint module": [[55, "module-pycbc.distributions.joint"]], "pycbc.distributions.mass module": [[55, "module-pycbc.distributions.mass"]], "pycbc.distributions.power_law module": [[55, 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"Aligned-spin geometric placement: pycbc_geom_aligned_bank": [[80, "aligned-spin-geometric-placement-pycbc-geom-aligned-bank"]], "Aligned-spin stochastic placement": [[80, "aligned-spin-stochastic-placement"]], "Ian\u2019s recommendation: Which stochastic code should I use?": [[80, "ian-s-recommendation-which-stochastic-code-should-i-use"]], "I want to use the F2 metric": [[80, "i-want-to-use-the-f2-metric"]], "I want to use another metric, ie. an IMR metric": [[80, "i-want-to-use-another-metric-ie-an-imr-metric"]], "I want to use direct match": [[80, "i-want-to-use-direct-match"]], "Command line options: pycbc_aligned_stoch_bank": [[80, "command-line-options-pycbc-aligned-stoch-bank"]], "Command line options: lalapps_cbc_sbank": [[80, "command-line-options-lalapps-cbc-sbank"]], "Sbank workflow generator": [[80, "sbank-workflow-generator"]], "Hybrid approaches: the best of both worlds": [[80, "hybrid-approaches-the-best-of-both-worlds"]], "The module\u2019s source code": [[80, "the-module-s-source-code"]], "Library Examples and Interactive Tutorials": [[81, "library-examples-and-interactive-tutorials"]], "Uploading triggers to gracedb": [[82, "uploading-triggers-to-gracedb"]], "Requirements": [[82, "requirements"], [88, "requirements"], [88, "id2"]], "Finding input files": [[82, "finding-input-files"]], "Running the command": [[82, "running-the-command"]], "Waveforms": [[83, "waveforms"]], "What waveforms can I generate?": [[83, "what-waveforms-can-i-generate"]], "Plotting Time Domain Waveforms": [[83, "plotting-time-domain-waveforms"]], "Generating one waveform in multiple detectors": [[83, "generating-one-waveform-in-multiple-detectors"]], "Calculating the match between waveforms": [[83, "calculating-the-match-between-waveforms"]], "Plotting a TD and FD waveform together in the TD": [[83, "plotting-a-td-and-fd-waveform-together-in-the-td"]], "Plotting GW phase and amplitude of TD waveform": [[83, "plotting-gw-phase-and-amplitude-of-td-waveform"]], "Plotting frequency evolution of TD waveform": [[83, "plotting-frequency-evolution-of-td-waveform"]], "Making new waveform approximants available to PyCBC": [[84, "making-new-waveform-approximants-available-to-pycbc"]], "Adding a custom waveform model within a script": [[84, "adding-a-custom-waveform-model-within-a-script"]], "Creating a plugin for PyCBC": [[84, "creating-a-plugin-for-pycbc"]], "Workflow: the inspiral analysis workflow generator (pycbc.workflow)": [[85, "workflow-the-inspiral-analysis-workflow-generator-pycbc-workflow"]], "Workflow module documentation": [[85, "workflow-module-documentation"]], "Basics and overview": [[85, "basics-and-overview"]], "Generating segments": [[85, "generating-segments"]], "Obtaining data": [[85, "obtaining-data"]], "Injection generation": [[85, "injection-generation"]], "Template bank": [[85, "template-bank"]], "Split table": [[85, "split-table"]], "Matched-filtering": [[85, "matched-filtering"]], "Coincidence": [[85, "coincidence"]], "The workflow datafind and validation module": [[86, "the-workflow-datafind-and-validation-module"]], "Usage": [[86, "usage"], [89, "usage"], [90, "usage"], [96, "usage"], [97, "usage"], [98, "usage"]], "Configuration file setup": [[86, "configuration-file-setup"], [89, "configuration-file-setup"], [90, "configuration-file-setup"], [96, "configuration-file-setup"], [97, "configuration-file-setup"], [98, "configuration-file-setup"]], "[workflow-datafind] section": [[86, "workflow-datafind-section"]], "[executables]": [[86, "executables"], [89, "executables"], [90, "executables"], [97, "executables"], [98, "executables"]], "Other sections": [[86, "other-sections"]], "[datafind]": [[86, "datafind"]], "pycbc.workflow.datafind Module": [[86, "pycbc-workflow-datafind-module"]], "HDF5 Based Coincidence Code": [[87, "hdf5-based-coincidence-code"]], "Limitations": [[87, "limitations"]], "Configuration File": [[87, "configuration-file"], [95, "configuration-file"]], "Workflow Configuration": [[87, "workflow-configuration"]], "Executable Configuration": [[87, "executable-configuration"]], "Options to the coincidence/background executable": [[87, "options-to-the-coincidence-background-executable"]], "Options to the coincidence clustering + statistic asignment executable": [[87, "options-to-the-coincidence-clustering-statistic-asignment-executable"]], "Options to the injection finding executable": [[87, "options-to-the-injection-finding-executable"]], "Options for sensitivity plotting": [[87, "options-for-sensitivity-plotting"]], "Pycbc\u2019s workflow module configuration file(s) and command line interface": [[88, "pycbc-s-workflow-module-configuration-file-s-and-command-line-interface"]], "Supplying the config file on the command line and overriding options": [[88, "supplying-the-config-file-on-the-command-line-and-overriding-options"]], "Example": [[88, "example"], [88, "id1"], [88, "id3"]], "Global options - the [workflow] section": [[88, "global-options-the-workflow-section"]], "[workflow-XXX] subsections": [[88, "workflow-xxx-subsections"]], "Executable locations - the [executables] section": [[88, "executable-locations-the-executables-section"]], "executable macros": [[88, "executable-macros"]], "which(executable)": [[88, "which-executable"]], "Executable options": [[88, "executable-options"]], "Example complete workflow .ini file": [[88, "example-complete-workflow-ini-file"]], "[sharedoptions] section": [[88, "sharedoptions-section"]], "Code documentation": [[88, "code-documentation"]], "pycbc.workflow.configuration Module": [[88, "pycbc-workflow-configuration-module"]], "The workflow injection generation module": [[89, "the-workflow-injection-generation-module"]], "[workflow-injections] section": [[89, "workflow-injections-section"]], "Supported injection executables and instructions for using them": [[89, "supported-injection-executables-and-instructions-for-using-them"]], "lalapps_inspinj": [[89, "lalapps-inspinj"]], "pycbc.workflow.injection Module": [[89, "pycbc-workflow-injection-module"]], "The workflow matched-filter module": [[90, "the-workflow-matched-filter-module"]], "[workflow-matchedfilter] section": [[90, "workflow-matchedfilter-section"]], "Supported inspiral trigger generators and instructions for using them": [[90, "supported-inspiral-trigger-generators-and-instructions-for-using-them"]], "lalapps_inspiral_ahope": [[90, "lalapps-inspiral-ahope"]], "pycbc_inspiral": [[90, "pycbc-inspiral"]], "pycbc.workflow.matched_filter Module": [[90, "pycbc-workflow-matched-filter-module"]], "pycbc_make_inference_inj_workflow: A parameter estimation workflow generator for injections": [[91, "pycbc-make-inference-inj-workflow-a-parameter-estimation-workflow-generator-for-injections"]], "Example: BBH injections with dynesty": [[91, "example-bbh-injections-with-dynesty"]], "Get the inference configuration files": [[91, "get-the-inference-configuration-files"], [92, "get-the-inference-configuration-files"]], "Setup the workflow configuration file": [[91, "setup-the-workflow-configuration-file"], [92, "setup-the-workflow-configuration-file"]], "Generate the workflow": [[91, "generate-the-workflow"], [92, "generate-the-workflow"], [95, "generate-the-workflow"]], "Plan and execute the workflow": [[91, "plan-and-execute-the-workflow"], [92, "plan-and-execute-the-workflow"]], "Results page": [[91, "results-page"], [92, "results-page"]], "pycbc_make_inference_workflow: A parameter estimation workflow generator": [[92, "pycbc-make-inference-workflow-a-parameter-estimation-workflow-generator"]], "Example: GW150914 and GW170814 with emcee_pt": [[92, "example-gw150914-and-gw170814-with-emcee-pt"]], "Example: GW150914 and GW170814 with dynesty": [[92, "example-gw150914-and-gw170814-with-dynesty"]], "pycbc_make_offline_search_workflow: A workflow to search for gravitational waves": [[93, "pycbc-make-offline-search-workflow-a-workflow-to-search-for-gravitational-waves"]], "Configuration file": [[93, "configuration-file"], [94, "configuration-file"]], "Planning and Submitting the Workflow": [[93, "planning-and-submitting-the-workflow"], [95, "planning-and-submitting-the-workflow"]], "Monitor and Debug the Workflow (Detailed Pegasus Documentation)": [[93, "monitor-and-debug-the-workflow-detailed-pegasus-documentation"], [95, "monitor-and-debug-the-workflow-detailed-pegasus-documentation"]], "Pegasus Dashboard": [[93, "pegasus-dashboard"], [95, "pegasus-dashboard"]], "Pegasus Analyzer": [[93, "pegasus-analyzer"]], "Reuse of data from a previous workflow": [[93, "reuse-of-data-from-a-previous-workflow"], [95, "reuse-of-data-from-a-previous-workflow"]], "Setting up a workflow for data reuse": [[93, "setting-up-a-workflow-for-data-reuse"]], "Extending the GPS end time of a previous workflow": [[93, "extending-the-gps-end-time-of-a-previous-workflow"]], "Re-running a workflow using a new veto definer file": [[93, "re-running-a-workflow-using-a-new-veto-definer-file"]], "Re-running a failed workflow": [[93, "re-running-a-failed-workflow"]], "Using partial products from a previous workflow": [[93, "using-partial-products-from-a-previous-workflow"]], "Running on the Open Science Grid": [[93, "running-on-the-open-science-grid"]], "Prerequisites": [[93, "prerequisites"]], "Configuring the workflow": [[93, "configuring-the-workflow"]], "Running the workflow": [[93, "running-the-workflow"]], "pycbc_make_psd_estimation_workflow: A workflow generator for noise estimation": [[94, "pycbc-make-psd-estimation-workflow-a-workflow-generator-for-noise-estimation"]], "Generating and running the workflow": [[94, "generating-and-running-the-workflow"]], "pycbc_make_offline_grb_workflow: A GRB triggered CBC analysis workflow generator": [[95, "pycbc-make-offline-grb-workflow-a-grb-triggered-cbc-analysis-workflow-generator"]], "Workflow Sections": [[95, "workflow-sections"]], "Executable Sections": [[95, "executable-sections"]], "Pegasus Profile Sections": [[95, "pegasus-profile-sections"]], "How to run": [[95, "how-to-run"]], "Set up a run directory": [[95, "set-up-a-run-directory"]], "Configuration files - Are you running from production configuration (.ini) files?": [[95, "configuration-files-are-you-running-from-production-configuration-ini-files"]], "Yes, I want to run in a standard production configuration": [[95, "yes-i-want-to-run-in-a-standard-production-configuration"]], "No, I have my own configuration files": [[95, "no-i-have-my-own-configuration-files"]], "Pegasus Plots": [[95, "pegasus-plots"]], "Generate the full workflow you want to do": [[95, "generate-the-full-workflow-you-want-to-do"]], "Select the files you want to reuse from the prior run": [[95, "select-the-files-you-want-to-reuse-from-the-prior-run"]], "Plan the workflow": [[95, "plan-the-workflow"]], "The workflow segment generation module": [[96, "the-workflow-segment-generation-module"]], "Example config file": [[96, "example-config-file"]], "Description of the ini file contents": [[96, "description-of-the-ini-file-contents"]], "Flag syntax": [[96, "flag-syntax"]], "Version numbers": [[96, "version-numbers"]], "The veto-definer file": [[96, "the-veto-definer-file"]], "Adding a ifo": [[96, "adding-a-ifo"]], "Providing padding": [[96, "providing-padding"]], "Providing valid times": [[96, "providing-valid-times"]], "Obtaining segments from pre-existing XML files": [[96, "obtaining-segments-from-pre-existing-xml-files"]], "pycbc.workflow.segment Module": [[96, "pycbc-workflow-segment-module"]], "The workflow table splitting module": [[97, "the-workflow-table-splitting-module"]], "[workflow-splittable] section": [[97, "workflow-splittable-section"]], "Supported splittable executables and instructions for using them": [[97, "supported-splittable-executables-and-instructions-for-using-them"]], "pycbc_splitbank": [[97, "pycbc-splitbank"]], "pycbc.workflow.splittable Module": [[97, "pycbc-workflow-splittable-module"]], "The workflow template bank generation module": [[98, "the-workflow-template-bank-generation-module"]], "[workflow-tmpltbank] section": [[98, "workflow-tmpltbank-section"]], "Supported template bank exes and instructions for using them": [[98, "supported-template-bank-exes-and-instructions-for-using-them"]], "lalapps_tmpltbank_ahope": [[98, "lalapps-tmpltbank-ahope"]], "pycbc_geom_nonspinbank": [[98, "pycbc-geom-nonspinbank"]], "pycbc.workflow.tmpltbank Module": [[98, "pycbc-workflow-tmpltbank-module"]]}, "indexentries": {"a0() (in module pycbc.pnutils)": [[53, "pycbc.pnutils.A0"]], "a3() (in module pycbc.pnutils)": [[53, "pycbc.pnutils.A3"]], "aligntotalspin (class in pycbc.transforms)": [[53, "pycbc.transforms.AlignTotalSpin"]], "alignedmassspintocartesianspin (class in pycbc.transforms)": [[53, "pycbc.transforms.AlignedMassSpinToCartesianSpin"]], "basetransform (class in 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"pycbc.bin_utils.IrregularBins.centres"]], "centres() (pycbc.bin_utils.linearbins method)": [[53, "pycbc.bin_utils.LinearBins.centres"]], "centres() (pycbc.bin_utils.linearplusoverflowbins method)": [[53, "pycbc.bin_utils.LinearPlusOverflowBins.centres"]], "centres() (pycbc.bin_utils.logarithmicbins method)": [[53, "pycbc.bin_utils.LogarithmicBins.centres"]], "centres() (pycbc.bin_utils.logarithmicplusoverflowbins method)": [[53, "pycbc.bin_utils.LogarithmicPlusOverflowBins.centres"]], "centres() (pycbc.bin_utils.ndbins method)": [[53, "pycbc.bin_utils.NDBins.centres"]], "chi_a() (in module pycbc.conversions)": [[53, "pycbc.conversions.chi_a"]], "chi_eff() (in module pycbc.conversions)": [[53, "pycbc.conversions.chi_eff"]], "chi_eff_from_spherical() (in module pycbc.conversions)": [[53, "pycbc.conversions.chi_eff_from_spherical"]], "chi_p() (in module pycbc.conversions)": [[53, "pycbc.conversions.chi_p"]], "chi_p_from_spherical() (in module pycbc.conversions)": [[53, 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"pycbc.workflow.jobsetup.PyCBCInspiralExecutable.zero_pad_data_extend"]]}}) \ No newline at end of file diff --git a/latest/html/tmpltbank.html b/latest/html/tmpltbank.html index 0456e301784..2001d38968e 100644 --- a/latest/html/tmpltbank.html +++ b/latest/html/tmpltbank.html @@ -443,7 +443,7 @@

Command line optionsCommand line optionsCommand line optionspycbc_geom_nonspinbank