pyproject.toml

[tool.poetry]
name = "traq"
version = "0.1.0"
description = "Preprocess clinical trials data for TRAQ"
authors = ["Walter Nelson <nelsonwa@hhsc.ca>"]
readme = "README.md"
packages = [{include = "traq"}]

[tool.poetry.dependencies]
python = "^3.11"
pyspark = "^3.4.1"
pandas = "^2.0.3"
toml = "^0.10.2"
pyarrow = "^12.0.1"
tqdm = "^4.65.0"
dvc = "3.28.0"
openpyxl = "^3.1.2"
# scmrepo = {git = "https://github.com/iterative/scmrepo.git", rev = "refs/pull/259/head"}
numba = "0.57.1"
pyod = "^1.1.0"
plotnine = "^0.12.2"
# critdd = {path = "../src/critdd/dist/critdd-0.0.5.dev0-py3-none-any.whl"}
xlrd = ">=2.0.01"
metaod = {git = "https://github.com/wjn0/MetaOD.git"}
scikit-learn = "1.2.2"
jinja2 = "^3.1.2"


[tool.poetry.group.dev.dependencies]
black = "^23.7.0"
isort = "^5.12.0"
flake8 = "^6.0.0"
pre-commit = "^3.3.3"

[tool.isort]
profile = "black"
src_paths = "traq"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"