{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":237097038,"defaultBranch":"main","name":"ribap","ownerLogin":"hoelzer-lab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-01-29T22:43:23.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/41161968?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1711632286.0","currentOid":""},"activityList":{"items":[{"before":"ba3361d5bc3355f984835cb7a927801b8ea791b9","after":"db1639ff8f6591c2c69c55913dec1755c9262a71","ref":"refs/heads/main","pushedAt":"2024-08-14T06:31:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"update citation GB","shortMessageHtmlLink":"update citation GB"}},{"before":"0131fc21d8d83db4538fce598da64f36302a3b37","after":"ba3361d5bc3355f984835cb7a927801b8ea791b9","ref":"refs/heads/main","pushedAt":"2024-08-14T06:26:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"update citation GB","shortMessageHtmlLink":"update citation GB"}},{"before":null,"after":"b607884203169ac0e8e6e724eba6ea2e7f257cfd","ref":"refs/heads/no-indel","pushedAt":"2024-03-27T14:53:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"remove indel ILP parameter","shortMessageHtmlLink":"remove indel ILP parameter"}},{"before":"6643ea474db5fb5e0b483b2960d213eb554e6b5c","after":"0131fc21d8d83db4538fce598da64f36302a3b37","ref":"refs/heads/main","pushedAt":"2023-08-23T13:05:45.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"Merge pull request #55 from hoelzer-lab/issue/filter_aln_failed\n\nHot fix for issue #54, skipping tree calc if no core gene MSA","shortMessageHtmlLink":"Merge pull request #55 from hoelzer-lab/issue/filter_aln_failed"}},{"before":"b16f490aded1a3eca35c38f81404be8d6057dbd9","after":"e9b8d0b735d18a43c1280ebcf01923db3e3f0ad8","ref":"refs/heads/issue/filter_aln_failed","pushedAt":"2023-08-21T13:04:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"dont spam nf log","shortMessageHtmlLink":"dont spam nf log"}},{"before":"02fc7c41b6ebdecb87a30eba51fc2cb039a5e275","after":"b16f490aded1a3eca35c38f81404be8d6057dbd9","ref":"refs/heads/issue/filter_aln_failed","pushedAt":"2023-08-21T08:26:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"implement strain frequency parameter to select core gene MSAs for tree","shortMessageHtmlLink":"implement strain frequency parameter to select core gene MSAs for tree"}},{"before":"4169e0737836acf53d51ab68de39294001429d38","after":"02fc7c41b6ebdecb87a30eba51fc2cb039a5e275","ref":"refs/heads/issue/filter_aln_failed","pushedAt":"2023-08-20T18:37:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"ignore filtering when no core MSA found","shortMessageHtmlLink":"ignore filtering when no core MSA found"}},{"before":"552b6fbb471dc1e756a3cc27ff12613383810eb6","after":"4169e0737836acf53d51ab68de39294001429d38","ref":"refs/heads/issue/filter_aln_failed","pushedAt":"2023-08-19T10:23:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"check if at least one core MSA found","shortMessageHtmlLink":"check if at least one core MSA found"}},{"before":null,"after":"552b6fbb471dc1e756a3cc27ff12613383810eb6","ref":"refs/heads/issue/filter_aln_failed","pushedAt":"2023-08-19T09:59:16.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"potential hot fix for issue #54, skipping tree calc if no core gene MSA","shortMessageHtmlLink":"potential hot fix for issue #54, skipping tree calc if no core gene MSA"}},{"before":"1144de1a18d4392fd3176310300d6ee8d4c2d82c","after":"6643ea474db5fb5e0b483b2960d213eb554e6b5c","ref":"refs/heads/main","pushedAt":"2023-08-01T08:16:39.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"Merge pull request #53 from hoelzer-lab/mac-fix\n\nremove unnecessary gunzip","shortMessageHtmlLink":"Merge pull request #53 from hoelzer-lab/mac-fix"}},{"before":null,"after":"7bbeac4d75208bfe51685169f69e43a7b2613a2a","ref":"refs/heads/mac-fix","pushedAt":"2023-07-31T15:34:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"remove unnecessary gunzip","shortMessageHtmlLink":"remove unnecessary gunzip"}},{"before":"3b068fa41fac67f43040c3e5f494811bd9034501","after":"1144de1a18d4392fd3176310300d6ee8d4c2d82c","ref":"refs/heads/main","pushedAt":"2023-07-31T14:58:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"fix auto revision grep for newest revision in README","shortMessageHtmlLink":"fix auto revision grep for newest revision in README"}},{"before":"5452abc90b899008a5b17cd5779e4efa4d954a22","after":"3b068fa41fac67f43040c3e5f494811bd9034501","ref":"refs/heads/main","pushedAt":"2023-05-04T12:24:18.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"klamkiew","name":"Kevin Lamkiewicz","path":"/klamkiew","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19253089?s=80&v=4"},"commit":{"message":"Merge pull request #51 from lisa-mariebarf/main\n\nUpdate README.md","shortMessageHtmlLink":"Merge pull request #51 from lisa-mariebarf/main"}},{"before":"f5118310a3075c38ed7dc6f3782f34f990911d36","after":"5452abc90b899008a5b17cd5779e4efa4d954a22","ref":"refs/heads/main","pushedAt":"2023-04-27T10:24:49.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"Merge pull request #50 from hoelzer-lab/example-data\n\nExample data","shortMessageHtmlLink":"Merge pull request #50 from hoelzer-lab/example-data"}},{"before":"b15fac413294abfbaa1e80bb5b3ac39f96f83d1f","after":"2b0a62014cc0489f83a169cd4b164e7d705b3629","ref":"refs/heads/example-data","pushedAt":"2023-04-27T09:49:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"reorder ToC","shortMessageHtmlLink":"reorder ToC"}},{"before":"4807588523527bedc7c95f060fe9631b7e6a8fd3","after":"b15fac413294abfbaa1e80bb5b3ac39f96f83d1f","ref":"refs/heads/example-data","pushedAt":"2023-04-27T09:47:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"GIF","shortMessageHtmlLink":"GIF"}},{"before":"4ec533660adf0e0b4a453ca795bd854952279901","after":"4807588523527bedc7c95f060fe9631b7e6a8fd3","ref":"refs/heads/example-data","pushedAt":"2023-04-27T09:45:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"GIF width","shortMessageHtmlLink":"GIF width"}},{"before":"763d232d1bbba54135965db57d433822c66b1351","after":"4ec533660adf0e0b4a453ca795bd854952279901","ref":"refs/heads/example-data","pushedAt":"2023-04-27T09:43:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"add example to readme","shortMessageHtmlLink":"add example to readme"}},{"before":null,"after":"763d232d1bbba54135965db57d433822c66b1351","ref":"refs/heads/example-data","pushedAt":"2023-04-27T09:37:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"add example data","shortMessageHtmlLink":"add example data"}},{"before":"1e41428afafe080e317f021e534ea7a6ae9a8a5c","after":"f5118310a3075c38ed7dc6f3782f34f990911d36","ref":"refs/heads/main","pushedAt":"2023-04-07T12:12:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"finalize README","shortMessageHtmlLink":"finalize README"}},{"before":"2bb368e7268f73688337a56df01e17eee9a4798d","after":"1e41428afafe080e317f021e534ea7a6ae9a8a5c","ref":"refs/heads/main","pushedAt":"2023-04-07T12:09:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"finalize README, updated table","shortMessageHtmlLink":"finalize README, updated table"}},{"before":"2bb368e7268f73688337a56df01e17eee9a4798d","after":"73500b66ffe287fe4d9efd6d54fc01167b67d5e9","ref":"refs/heads/lessIO","pushedAt":"2023-04-07T12:08:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"finalize README, updated table","shortMessageHtmlLink":"finalize README, updated table"}},{"before":"a4787d2ae70243f55d3afbbc342ab6f2a0d281b5","after":"2bb368e7268f73688337a56df01e17eee9a4798d","ref":"refs/heads/main","pushedAt":"2023-04-07T07:46:08.000Z","pushType":"push","commitsCount":92,"pusher":{"login":"klamkiew","name":"Kevin Lamkiewicz","path":"/klamkiew","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19253089?s=80&v=4"},"commit":{"message":"finalize README, updated table","shortMessageHtmlLink":"finalize README, updated table"}},{"before":"441754e3b47670a443aa247df62161cb7a77606e","after":"2bb368e7268f73688337a56df01e17eee9a4798d","ref":"refs/heads/dev","pushedAt":"2023-04-07T07:45:38.000Z","pushType":"push","commitsCount":33,"pusher":{"login":"klamkiew","name":"Kevin Lamkiewicz","path":"/klamkiew","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19253089?s=80&v=4"},"commit":{"message":"finalize README, updated table","shortMessageHtmlLink":"finalize README, updated table"}},{"before":"c03598b4322db5f3fb20a5a47291a9d50238905b","after":"2bb368e7268f73688337a56df01e17eee9a4798d","ref":"refs/heads/lessIO","pushedAt":"2023-04-06T20:20:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"finalize README, updated table","shortMessageHtmlLink":"finalize README, updated table"}},{"before":"dbeeceedf3ad881b5df7d783f987a953b30fa2b7","after":"c03598b4322db5f3fb20a5a47291a9d50238905b","ref":"refs/heads/lessIO","pushedAt":"2023-04-06T11:47:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"update overview fig & wip README","shortMessageHtmlLink":"update overview fig & wip README"}},{"before":"5f9b4e5cc0c78d2e2805e7cf8afcbf5548f096b3","after":"dbeeceedf3ad881b5df7d783f987a953b30fa2b7","ref":"refs/heads/lessIO","pushedAt":"2023-04-06T08:30:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"klamkiew","name":"Kevin Lamkiewicz","path":"/klamkiew","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19253089?s=80&v=4"},"commit":{"message":"cpu parameter removed from derive_ilp_solutions.py","shortMessageHtmlLink":"cpu parameter removed from derive_ilp_solutions.py"}},{"before":"5a747ff1fcded33293adcd01bcc1b2ec4ea628f3","after":"5f9b4e5cc0c78d2e2805e7cf8afcbf5548f096b3","ref":"refs/heads/lessIO","pushedAt":"2023-04-06T08:27:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"klamkiew","name":"Kevin Lamkiewicz","path":"/klamkiew","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/19253089?s=80&v=4"},"commit":{"message":"output dir enumeration fix :)","shortMessageHtmlLink":"output dir enumeration fix :)"}},{"before":"82f0bc2fc8bc2d02ce4c12f1545d1bd355d1582e","after":"5a747ff1fcded33293adcd01bcc1b2ec4ea628f3","ref":"refs/heads/lessIO","pushedAt":"2023-03-22T12:36:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"increase RAM for ILP refinement","shortMessageHtmlLink":"increase RAM for ILP refinement"}},{"before":"9ea7e84553e2df8fb5fd82a35c8ad400f53a242c","after":"82f0bc2fc8bc2d02ce4c12f1545d1bd355d1582e","ref":"refs/heads/lessIO","pushedAt":"2023-03-20T16:28:36.711Z","pushType":"push","commitsCount":1,"pusher":{"login":"hoelzer","name":"Martin Hölzer","path":"/hoelzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14393703?s=80&v=4"},"commit":{"message":"add chunk parameter,clean keepILPs parameter","shortMessageHtmlLink":"add chunk parameter,clean keepILPs parameter"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0xNFQwNjozMTo1Mi4wMDAwMDBazwAAAASZ6Nx7","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wMy0yMFQxNjoyODozNi43MTE3OTZazwAAAAMHVnnX"}},"title":"Activity · hoelzer-lab/ribap"}