rosettR is a protocol for a high-throughput growth phenotyping assay for Arabidopsis implemented as an R-package that details all steps and provides data analysis with minimal required user interaction.
This package is not yet on CRAN so installation is best done using the devtools package. First, install EBImage which is a dependency from bioconductor that needs to be installed separately. In R do:
source("http://www.bioconductor.org/biocLite.R")
biocLite("EBImage")Then, after installing devtools, do
library(devtools)
install_github("hredestig/rosettR", subdir="pkg")Then get started by opening the introduction vignette and following the examples provided there.
library(rosettR)
vignette("introduction", "rosettR")