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How to identify the taxa coding for specific gene within the shotgun metagenome via MEGAN6 UE #20

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MohammadHKhan opened this issue Jul 13, 2023 · 0 comments
Open

How to identify the taxa coding for specific gene within the shotgun metagenome via MEGAN6 UE #20

MohammadHKhan opened this issue Jul 13, 2023 · 0 comments

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@MohammadHKhan
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Hi,
I am trying to find out that after meganizing DAA files, we can relate functional profile with taxonomy profile.? For example, I have environmental samples. So, I am searching for taxa (bacteria, in my case) that codes for specific gene (nifH gene, in my case) within the shotgun metagenome via MEGAN6 UE.
Can anyone please reply which command shall I use in GUI to gather the above asked information?
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@MohammadHKhan